EMBL-EBI > Goldman Group

PANDIT Home | Browse PANDIT | Help on PANDIT | Release notes | Pfam



PANDIT Homepage
pan•dit
PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF03060 alignment
(12 sequences with 445 aa)


P71591_MYCTU/4-311 STAFSQMFGIDYPIVSAPMDL.IAGGELAAAVSGAGGLGLIG--GGYGDR-......-DWLARQF----DLAAGAPVGCGFITWSLARQPQ-----------------------LLDLALQYEPV---------.---------------------.---AVMLSFGDP-AVFADAIKSAGTRLVCQIQNRTQAERALQVG.------ADVLVAQGTEAGGHGHG-----PRS----TLTLVPEIVDLVTARGTD---IPVIAAGGIADGRGLAAALMLGAAGVLVGTRFYATVEALSTPQARDPLLAATGDDMCRTTIYDQLRRYPWPQGHTMSVLSNALTDQFED----TELDILHREEA---...........................--MAR-----YWRAVAAR---DYSIANVTAGQAAGLVNAVLPAADVITGMAQQ
Q9WZQ7_THEMA/4-300 RTRVTDLLEIEHPILMGGMAW.AGTPTLAAAVSEAGGLGIIG--SGAMKP-......-DDLRKAISELRQKTDK-PFGVNIILVSPWADDL--------------------V----KVCIEEKVP---------.---------------------.---VVTFGAGNP-TKYIRELKENGTKVIPVVASDSLARMVERAG.------ADAVIAEGMESGGHIG------EVT-----TFVLVNKVSRSVN-------IPVIAAGGIADGRGMAAAFALGAEAVQMGTRFVASVESDVHPVYKEKIVKASIRDTVVTGAKL---------GHPARVLRTPFARKIQ----EMEFENPMQAEE---...........................-MLVGS----LRRAVVEG---DLERGSFMVGQSAGLIDEIKPVKQIIEDILKE
P71847_MYCTU/4-342 RTPLTELIGIEHPVVQTGMGW.VAGARLVSATANAGGLGILA--SATMTL-......-DELAAAITKVKAVTDK-PFGVNIRADAADAGDR------------------------VELMIREGVR---------.---------------------.---VASFALAPK-QQLIARLKEAGAVVIPSIGAAKHARKVAAWG.------ADAMIVQGGEGGGHTG------PVA-----TTLLLPSVLDAVA-GTG---IPVIAAGGFFDGRGLAAALCYGAAGVAMGTRFLLTSDSTVPDAVKRRYLQAGLDGTVVTTRVD---------GMPHRVLRTELVEKLESGSRARGFAAALRNAGKFRrmsqmtwrsmirdgltmrhgkeltwsqVLMAANTPMLLKAGLVDG---NTEAGVLASGQVAGILDDLPSCKELIESIVLD
O28109_ARCFU/1-268 MNRIAKLLKTKYPIVQGPMAG.ITLGEFASTVSEAGGLGVIA--SAGLSP-......-EKLKEEIEKVKNRTDK-PFAVNIPIYQPGSEKN------------------------LETALKADVG---------.---------------------.---IIYTSAGSP-EKYTERVKESGAKVIHKVSRLKEGLKAEKAG.------VDAVVAMGFEAGGIIG------RSG---VTSFCLIPELADNLS-------IPVVAAGGIADERGFAAALILGAEGVEIGTRLLATKECPVPESIKQAILKATCDSTMVIESP-----------VVMRALKPELSGDSE-------------------...........................-------------NPALG------------GQVSGLIKEILTVEEVIRKIAEG
Q9RQD7_ZYMMO/16-331 NSRLSAILKIQYPLIQAPMSW.ITNADFVAAVSEAGGLGVLGPHAGYHTPPkdpqeiLDRVRLEIRKVKSLTDK-PFGLNLLLLKDDPLDD-------------------FTKAWLNIAFEEGVT---------.---------------------.--HFVSVGNADNRVFNLIKEHDGIIIHRPLTASITNMREAESLG.------ADVLVATGYDEGGMIPTR----AIG-----TFTVVPTMVDAVD-------IPVMATGGINDRRGVKAAFALGAEGVYIGTRFIVTKENPASEITKKKIVESGCDDIEFVSPKQ----------RSIRTQAADILGSLYLN---KENTLDLDTEIS--...........................--RLGG----VRPAMLEG---KLDEGIISVNTGIDVIRSIPTVKELVIDLLGL
O07738_MYCTU/2-359 HTAICDEL----GIEFPIFAF.THCRDVVVAVSKAGGFGVLG--AVGFTP-......-EQLEIELNWIDEHIGDHPYGVDIVIPNKYEGMDSQLSADELAKTLRSMVPQEHLDFARKILADHGVP-VEDADEDS.LQLLGWTEATATPQVDAALKHpKMTMVANALGTPPADMIKHIHDSGRKVAALCGSPSQARKHADAG.------VDIIIAQGGEAGGHCG------EVG----SIVLWPQVVKEVAP-------VPVLAAGGIGSGQQIAAALALGTQGAWTGSQWLMVEEAANTAVQQAAYVKATSRDTVRSRSFT---------GKPARMLRNDWTEAWEQP--ESPKPLGMPLQ----...........................-YMVSG--MAVKATHKYP-NETVDVAFNPVGQVVGQFTKVEKTATVIERWVQE
O06179_MYCTU/2-361 RTRVAELL----GAEFPICAF.SHCRDVVAAVSNAGGFGILG--AVAHSP-......-KRLESELTWIEEHTGGKPYGVDVLLPPKYIGAE-QGGID--AQQARELIPEGHRTFVDDLLVRYGIPAVTDRQRSSsAGGLHISPKGYQPLLDVAFAH.DIRLIASALGPPPPDLVERAHNHDVLVAALAGTAQHARRHAAAG.------VDLIVAQGTEAGGHTG------EVA----TMVLVPEVVDAVSP-------TPVLAAGGIARGRQIAAALALGAEGVWCGSVWLTTEEAETPPVVKDKFLAATSSDTVRSRSLT---------GKPARMLRTAWTDEWDRP--DSPDPLGMPLQS---...........................-ALVSDPQLRINQAAGQPGAKARELATYFVGQVVGSLDRVRSARSVVLDMVEE
O05413_BACSU/2-343 NEFMKKFSLTKPIIQAPMAGG.ITKPRLASAVSNQGALGSLA--SGYLTP-......-DLLEQQIKEIFELTDA-PFQINVFVPLGLEMPP---------KDQIKKWKENIP-LANQVNQFTSVQ----EEWDD.----------FYQKIDLILKY.KVKACSFTFDLPPEDAVKELKTAGCCLIGTASTVEEALLMEERG.------MDIVVLQGSEAGGHRGAFLP--SKGESAVGLMALIPQAADALS-------VPVIAAGGMIDHRGVKAALTLGAQGVQIGSAFLICHESNAHPVHKQKILEANEADTKLTTLFS---------GKEARGIVNKWMEENEQ---FETQTLPYPYQN---...........................-TLTKA----MRQKASLQ--NNHDQMSLWAGQGIRSLTEEISVKQLLNQLCQE
O33323_MYCTU/2-340 VLGFWDIA--VPIVGAPMAGG.PSTPALAAAVSNAGGLGFVA--GGYLSA-......-DRLADDIAAARAATTG-PIGANLFVPQPSVADW----------AQLEYYADELEEVAEYYHTEVGQP---VYGDDD.---------DWVRKLEVVADV.RPEVVSFTFGAPPPDVVQRLSALGLLVSITVTSVYEAGVAIAAG.------ADSLVVQGPAAGGHRGTFAPDMEPG--TESLHQLLDRIGSAHD-------VPLVAAGGLGTAEDVAAVLRRGAIAAQVGTALLLADEAGTNAAHRAALKNPEFDATLVTRAFS---------GRYARGLANNFTRLLD-----HVAPLGYPEVH---...........................-QMTKP----IRAAAVQA--DDPHGTNLWAGSAH-RKTRPGPAADIIASLTPD
Q9RDD8_STRCO/2-343 SSALTDLFP-YPIVQAPMAGG.VSVPRLAAAVSEAGGLGFLA--AGYKTA-......-DGMYQEIKQLRGLTSR-PFGVNLFLPQPETADP----------AAVDVYAHQLAGEAAWYETELGDP---DCGRDD.---------GYDTKVAVLLDN.PVPVVSFHFGVPSREVVDSLHRVGTFALVGATTADEARAVEQSG.------ADAVIAQGMEAGGHQGTHRDNPETGGAGTGLLSLVAQVREAVS-------LPILAAGGIMRGGQIAAVLAAGASAAQLGTAFLATSESGAHDLHKQALTNPLFVRTELTRAFS---------GRPARALVNRFLREHG-----PYAPAAYPEVH---...........................-HLTAP----VRKAAAKA--GDAQGMALWAGQGH-RMARELPAGQLVEVLVAE
2NPD_WILMR/5-373 IQSFLKTFEVRYPIIQAPMAG.ASTLELAATVTRLGGIGSIP--MGSLSEK......CDAIETQLENFDELVGDSGRIVNLNFFAHKEPRSGRADVNEEWLKKYDKIYGKAGIEFDKKELKLLYPSFRSIVDP-.-----------QHPTVRLLKNlKPKIVSFHFGLPHEAVIESLQASDIKIFVTVTNLQEFQQAYESK.------LDGVVLQGWEAGGHRGNFKAN-DVEDGQLKTLDLVSTIVDYIDSASISNPPFIIAAGGIHDDESIKELLQFNIAAVQLGTVWLPSSQATISPEHLKMFQSP-KSDTMMTAAIS---------GRNLRTISTPFLRDLHQ----SSPLASIPDYP---...........................-LPYDS-FKSLANDAKQSGKGPQYSAFLAGSNYHKSWKDTRSTEEIFSILVQD
O25465_HELPY/6-363 KPLKIGKHTIKFPIFQGGMGVgISWDELAGNVAKEGALGVIS---AVGTG-......---YYKNMRFVERIVAKKPFEALNFYSKKALNEIFAN------------ARKICGNNPLGANILYAIN---------.----------DYGRVLRDSCEaGANIIITGAGLPTNMPEFAKDFSDVALIPIISSAKALKILCKRWsDRYKRIPDAFIVEGPLSGGHQG-----FKYEDCFKEEFRLENLVPKVVEASKEWGNIPIIAAGGIWDRKDIDTMLSLGASGVQMATRFLGTKECDAKVYADLLPTLKKEDILLIKSPVG----------YPARAINTGVIKRIEEGNAPKIACVSNCVAPCNR...........................GEEAKKVGYCIADGLGRSYLGNREEGLYFTGANGYRVDKIISVHELIKELTEG