EMBL-EBI > Goldman Group

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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF03049 alignment
(9 sequences with 813 bp)


O41937_MHV68/14-267 ATGTTGGGGCGATATGTGATAGTTGGAAAGCCAATGTCTCCTGGCCTGCAGGCGCTACTGTCTAAAATTTTATTTAAGGATAAATTAAATACGCTATCCTCGACAGAATTGAGGTTGTTACATGCTATCCTCTGTCACCTGTATAATTTTACCACCAATTGTTACCTGTTCAAGTATGCTCTCTATAACACTGGTACATATGACAATGGTGTCCTGGGCAGAAAAGTGCCCATACAGTTTTGGACTCTGCTCTATGAGGTGTGCCTAGAGAGTGGC---...---CTGACAACGAAGGACCTCACTGACGAGACCGTGGCGGCCAGCCTCTGGTATCGCCTGAACACGGCCGATGATGGAACGCTGTGTGGGTTCTGTGAAAAGATTTTTAAAAAGCTGGGTCTGACCCATCATGTGGCGCTCGACCTAGTGAATCTGAGAGATGGTAACCTGCTGTTCAACCTGGGAAGCACCATCCCTTGCAGGCTCCTGATGTGCCTGCTCTTTTGTCTGAAAAATTGGGGAGCGCAAGGCCTGGAGCCTTGGGTCAGGCACTACGTGGGAAAGTTCTTCCTCTTGTACTTGATTCTGGCTGGTTATCTTCTCCCCAGGAAAGAGTGTGTGGAATTTGCCGCCACCCAGTCATACGCTGGGCTAATGGAAACCATCTGTGCTGACATCTTGACTTTCCAGGGGTCCCAGGCC---------------------------------CTTTCCCTCCCACCAGATAATTATCTGCAGGAACTTGATCAGTTGTTT---------ACTTTTAACAACAGCTTT
O36368_9GAMA/14-266 ATCTTGGGGCGCTATGTGTCTGCCGGACCTGGCTTCAGCCCCGGAGTTAGAGCTCTGTTGTTTAAGTTGCTCGGGGGCAAAACTTTAAATACACTGACGCCCGAGGAGCTGAGGTTCAGCCACCTGGTCGTCAGTAAGATGTATGAGCTGGGGCTAAACGTGTTCCTGCTCAGGGAGGCCGTGGCCAACTGTGGCGTCACAGATGCTGTGATTTTAGAGCGAAAGGTGCCTGTGGAGTTTTGGAAAATCCTCTTTGATGGCTGTGTCGCCCTGGGA---...---GTGAAAGAGGACATGCTCCTCTCAGAGGCCGGGCGCTCGCAGCTGTGGCTGCACCTGAAC---AAAAACCCCCAGCTGTTAAAAGGGCTGGCGGGGTATGTGCTGCGTAGGCTGGGCCTGTGCCAACATGTGAAGGTGCACCCCCAGAATCTACTGGATGGGAATTTTTTATTCAACCTGGGCAGTGTGTTCTCCTGCAGGTTGCTGATGGTGGCGGCTTTCTGCCTGCTTTTTTGGGGCAGGCCCGAAGTAGAGCCCTGGGTGAGAACATTTGTCACCAAGATCTACGTGCTCTACCTGATTATCGTGGGGGCCCTGCGGATCAATTTTTCAGTGTTTGAACTCAGCACCCAAAATGGGTACTGTGGGATCCTAGAGGCTATCTGCTCGGACCTGATGGCCGTTGCCGGCCACGGGGGC---------------------------------GAGGGTTCGCGAGAGAGGCAATGGCACGCGTGGTTAGATTACCTTTTT---------ATTTTCAACAACAACGTG
Q9WRT4_9GAMA/43-298 ATGTTGGGTCGGTGTCTGCGTGAGCCGAAGGAGATGAGCGCCGGTCTTCGGGGGCTGATGTGGCGCGTTATCCGTTGTGAGAATTTAAATACGTTTCTCCCTGGCGAGCTCAGGTTTCTTCACCTGGTGCTGTGCGAAATGTACAACTACGGTCTTAACGTGTACCTTCTGAAGGAGGCAATTGCCAATACCGGAACGAGGGACGATATTGTCCTCGGGCGTAAGGTTCCGGTGGAGTTCTGGAAAATCGTTTACGATGGGTTAAAGGAGATGGGG---...---GTTTCTGACGCAACGTTGCTCTCAGAAACCAAAAGGGGGGCTCTGTGGCTTTACTTCAAC---GGGCGTCCGTGCCTGTTAAAAGGTCTAGGCGACTACGTTTTTTGCCAACTGGGGTTAAGCCACAGCGTACGCGTGGTTCCGGAAAACCTAACGGATGGGAATTATCTCTATAACCTAGGCAGCGTCATACCATGTCGCCTGCTTGTGGCACTGAGCTACTGTTTGGCGTTTTGGGGGCACGCTGACCACGAGCCCTGGGTCAGGTTGTTCGCCGGCAAGATTTTTATACTGTACTTAATAATTTCCGGCCACATTATGCCACGGAAGTCAATCTTAGAACAGGTGGGAACGTCCGGGTACGGTGGCTTCGTCGAGGCAGTGTGTCGCGATGTTCGCGCGGTACACGGGATTCCGGCGTGGGAT------------------------TTTGCGTCCGCGGCTCCGGCGTTAACGTCTCAACAGACGGACTACTTGTTT---------GCGTTCAATAACAGCGTA
P88912_HHV8/1-256 ATGCTCGGAAAATACGTGTGTGAGACCGAGCCGCTGAGCCCGGGGCTTAGGAGGCTCATGTGGCGCTTTTTGCAAAATAAGAATTTAAATACATTCCACGCCCAAGAGCTGCGTTTTATTCATTTGGTTCTCTGCAGGATGTACAATTTCGGTCTAAATGTGTACCTGTTAAGGGAGGCTACTGCCAATGCCGGGACCTACGACGAGGTGGTCCTGGGACGCAAGGTTCCTGCGGAGGTGTGGAAGCTCGTGTACGATGGGCTCGAGGAGATGGGC---...---GTGTCAAGTGAGATGCTGCTGTGTGAGGCATACCGGGACAGCCTCTGGATGCACTTGAAC---GATAAGGTGGGGCTCTTGAGGGGCCTGGCGAATTATCTGTTTCACCGGCTAGGGGTCACCCACGACGTTCGCATCGCCCCGGAAAACCTGGTGGACGGAAACTTTTTGTTTAATCTGGGAAGTGTGCTCCCCTGCAGGCTGCTCCTTGCGGCGGGCTACTGCCTCGCCTTTTGGGGCAGCGATGAACACGAACGCTGGGTGCGCTTCTTCGCCCAGAAGCTTTTCATTTGCTACCTGATAGTCTCCGGGCGTCTTATGCCACAGAGGTCTCTGCTAGTTTGGGCCAGCGAAACGGGCTATCCCGGTCCGGTGGAGGCAGTCTGTCGCGACATCCGCTCCATGTACGGCATACGAACGTATGCG------------------------GTCTCGGGTTATCTTCCGGCTCCGTCCGAAGCGCAGCTGGCCTACCTTGGT---------GCGTTTAACAACAACGCG
Q66621_9GAMA/1-255 ATGTTTGGCAAGCTCGTGAGACCCGGGAGGCCTATGAGCTCCGGGGTGCGGGAACTTATGTGGCGGGTGCTGCGCGGCACGAGTTTAAATAATTACAGCGCCGCGCAGCTCAGGTTTATGCACCTGATTCTGTGCAAGATGTACAACTACGCGCTGAACGTGCTGCTGTTCAGGGAGACCCTGGCCAACTGCGCCTGCAGGGACGACTGCGTCCTGGGCAGGAAGGTGCCCCCCGAGATATGGAGGCTGGTGTACGACGGCTGCAAGGAGATGGGG---...---GTGACCGACGAGATGCTGGGGGAGGAGCGCCGCAGGGCGCAGCTGTGGATGCACTTTAAC---GCCAACCGCGCGCTGCTGGAGGGCCTCACCAACTACGTGACCCACCGGCTGGGGGTGACGCACGCCGTCTCCGTGTGCAGCAACAACATCACGGACGGCAACTACCTGTTTAACCTGGGCAGCGTGCTGCCCTCGCGCATCCTCATGAGCATAGCCTACTGTCTGGTGTTCTGGGGGCGCCAGGAGTGCGAGCCCTGGGTGAGGCACTTCTCCTCCAAGGTCTTCATCCTCTACCTCATGGTCTCGGGCCACCTGAGGCTGGAGGGGTCCTTCGCGGACGCCTCGGCCGCCTGCGGGTACCAGGGGGTGGTGGAGGTGGTCATGAGGGACATGAGGGGCTACAGGGGCGTCGAGGGG---CCC------------------------GTGGCCCCCGGGGGCGAGGCGCCCCCCACGGACACGCTGGACTACCTCTTC---------GTGTTCAACAACAACGTT
UL79_SHV21/3-255 ATTCTTGGCAGATTTGTACGCGAAAGCAAGAAAATGAGCCCTGGATTAAAGACAATAATGGAAAAAGTCTTAAGAGGCCAAAGTTTAAATAGTTTTCATTCAGAAGAACTTAGATTTTTACACCTTGTAATTTGTAAAATGTATGATTTTTGCTTAAACGTTTACATTCTAAAAGAATCAATTATAAATACAGGCACAAGGGATAATGAAGTTCTCAGTAGGAAAGTGCCAGTCGAAATTTGGAAAATTATGTATGATGCTTGTAAATCTATAGGA---...---GTTGAAAACACTATGCTTATTGATGACTCTAGCAGAGGCCAACTGTGGCTACATTTGAAC---TCTAACATTGACTTGCTTCAAGGCATGAGTCAGTTTATATTTTCAAAGCTCGGTATAAAACATTTTGTAAAAATTTCACCTCAGAATATTACAGATGGAAACTATTTGTTTAATTTAGGCAGTGTGTTGCCTTACAGGCTCATATTAATATTACAATTTTGTTTAATTTTCTGGGGAAAAGAGCAAGAAGAGGCATGGGTACGATTCTTCACAGGAAAAATATTTATGCTTTATTTGCTTATTACAGGCCACTTGCTCATTCAGAAAACATTTATACTGCAAGCTGCATCTACTGGTTACTGTGGACCTTTAGAAATTATAGGGGATGATTTAAGAAGTTATCTAGGAATACATACT---------------------------------TATATGACAAATGATTTGCAACACATACCATCTTTAGATTTGTTGTTT---------ATTTTTAATAATAATTTT
UL79_HCMVA/15-280 CGCACGGGCAAATTCTCCTTTACT------TGCGCCAATCATCTAATATTACAGATTAGCGAGAAGATGTCGCGCGGACAGCCGCTGAGCTCGCTGCGTTTGGAAGAACTCAAGATCGTACGCCTCATCTGCGTCCTCCTCTTTCACCGCGGTCTCGAAACGCTGCTACTGCGCGAAACCATGAACAACCTGGGTGTCTCGGACCACGCCGTGCTTAGTCGCAAGACGCCGCAACCCTACTGGCCTCATCTGTACCGCGAACTGCGCCAGGCCTTCCCGgggCTGGACTTTGAGGCGGCCGTGTTCGATGAAACGCGCGCCGCCCGTCTCAGCCAGCGCCTGTGT---CACCCGCGCTTGAGCGGCGGACTGCTGACGCGCTTTGTGCAGCGCCACACCGGCCTGCCG------GTCGTTTTCCCCGAAGACCTGGCGCGCAACGGCAACATCCTCTTCTCCCTAGGCACGCTCTACGGACACCGCTTGTTTCGTCTGGCGGCCTTCTTCACGCGCCACTGGGGTGCCGAAGCGTACGAACCCTTGATTCGCATCATCTGTCAAAAAATGTGGTACTTTTATCTCATCGGCACCGGCAAGATGCGCATTACCCCCGACGCCTTCGAGATCCAGCGGAGTCGACACGAGACGGGCATTTTTACTTTTATTATGGAAGATTACAGAACGTTCGCCGGCACGCTGTCCCGGCACCCGCACCGTCCGCACCCACAACAGCAGCAGCACCACCACCCCGGTCCCCCCCATCCTCCTCTTTCTCACCCTGCCTCGTCCTGTCTCAGCCCAGAGGCCGTA
UL79_HHV7J/3-254 CAAGTAGGTCAATACATAATCTCGAACAACTCAACCTCCAATTTAATATTACATATCACTAAGAAATTGGTAAGCGGTGAATCTTTATTTAATCTAAAACAAGAAGAGATTTTGATCATCCAGAATGTGTGTACCCTAATGTTTTCTCACGGCATCCAAATCTTACTGTTGAGAGAGACTTTGCACAATATCGGAGTGAGTGATTTAGTGGTTCTGAATCGAAAGGTACCTGATGAATTTTGGTTTAAGATCTTTTGCATGATTAAACAAAGATCTGGA...TCAGAAATCCTTAAACATATCTTCAGTGAAGAAAATGCAGCTCAGCTCTCGAAAAAATTACAT---CATACTGGAATTGTTAAACAAATCATAGAAAGTTTCTTTTTGGATGAATTTGGTCTTTCA------ATTACAATTCCAGCTGAAATTATTCACGATGGGAATATAATGTTTTCTATTGGTGCCATCTACAATCACCGTTTATTAAAATTATGTCGCTATTTCAACAAGTTCTGGGGGCAAGAAGTATATGAACCTTTTATCCGAAAAATTTGTAAGCATCTGTGGTTTGGTTATTTAATTTTTTTTGACAAGATCAAAATTTCTCACGGTGCTTTTAGTCAACAGAAACCAGAACACAGGAATGGATTATTTACTTTTATTCAGAATGATTTCAAAGTTTTTTGTGGCATAGTGGAG------------------------------------AAAGAAGCAAAAGTAACAGAGTGTAATTTATCAGATTTGTTTTCT---------ATTGGACCTCTACAATTT
UL79_HHV6U/3-254 CAGATAGGACAGTACATAAAATTGAACGACGCCGTCCCTAATTTAATATTACACATAACCACAAAACTGCTTAGAAACGAGAATCTGACTAGCTTTAAACAAGAGGAATTACTTTTAATTCAACACGTATGTACATCAATGCTGTCACACGGAATCAAGATCTTACTACTACGCGAAAGTTTGTACAATTCTGGAATCGGAGACATAGTGATTTTGAATCGTAAAATCAGCAACAACTACTGGTTTCGAATATTTTCTATTCTGAAACAGCATTCTGAC...GCGGAACTACTCCGACATATGTTTAACGAAAGTCACTCAGCATATATCTCAAAAAAGCTGCAC---TACAGCGGAAATGTTAGTCACATGATTAATTTTCTTTTCATGGACGAGTTTGGTGTAAAT------CTCAAAATTCCGGAAGAATTAATCTGCGAAGGCAATATAGTTTTCTCCGTTGGAGCTATCTATAATCACCGACTTTTAAAAATCTGCAGATTCTTTAACCGATTTTGGGGGGATCAAGAACGAGAACCAACAGTGCGGCTCATCTGCAAACACCTATGGTTTGCCTATCTTATAATGTTTGGAAAATTTGAGATATCCACACTGGCGTACAGTCAGCAAAGAGCCGAGCACAAAGCCGGACTGTTTTCATTTCTCCAAAACGACTTTAAAGTCTTCTGCGGTATGTCTGAA------------------------------------AATCCACAATTACTCGACAGCTCTGCCATATTTGACCTTACAGGA---------ATCAGCGCCGAAGATCTA