EMBL-EBI > Goldman Group

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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF03047 alignment
(12 sequences with 165 bp)


O33615_STRCV/1-48 ATGAAAAAAATTTTTAGCAAAAAGgaaATAACTAAAGTGGAAGTTGAATCATTTAAAGAACTTACTGATGAACAGTTAAATAAAATTGTTGGTGGAGATAGTCGAATAAGAATGGGATTTGAT---......---TTTTCTAAACTTTTTGGTAAA---------
O33596_STRAP/1-48 ATGAAAAAGTTGTTTGCTAAAAAAgagGTAGTAAAAAAGGAAGTTGTAGAATTTAAAGAACTGAATGATGAGCAGTTAGATAAAATCATTGGTGGGGATAGTCGAATCAGAATGGGATTTGAT---......---TTTTCAAAACTTTTTGGTAAA---------
P72445_STRGN/1-50 ATGAAAAAGAAAAACAAACAAAAT...CTATTGCCAAAAGAGTTACAACAATTTGAAATTTTGACAGAAAGAAAATTAGAGCAAGTTACTGGTGGAGATGTTCGCTCAAACAAA---------ATTagattaTGGTGGGAAAATATATTCTTT---AATAAAAAA
P72443_STRGN/1-50 ATGAAAAAGAAAAACAAACAAAAT...CTATTGCCAAAAGAGTTACAACAATTTGAAATTTTGACAGAAAGAAAATTAGAGCAAGTTACTGGTGGAGATATTCGACATAGGATT---------AATaattcaATTTGGAGAGATATTTTTTTA---AAAAGAAAA
O33617_STRCR/1-42 ATGAAAAATACTCAGAAAAAC---...------TTTAAAACAATCGCTCAATTCCCAGTCTTGAATGAAAAAGAACTTAAAGAAGTTCTTGGAGGAGATTTAAGAAATATCTTC------------......---TTAAAAATTAAATTT------AAGAAAAAA
CSP_STROR/1-41 ATGAAAAATACAGAAAAG------...---------------TTGGAACAATTTAAAGAAGTAACAGAGGCAGAATTGCAGGAGATTCGAGGTGGAGATAAAAGACTACCTTAC------------......TTTTTTAAACATCTTTTTTCAAATAGGACAAAG
CSP2_STROR/1-41 ATGAAAAATACAGTAAAG------...---------------TTGGAACAATTTAAAGAAGTAACAGAGGCAGAATTGCAGGAGATTCGAGGTGGAGATTGGAGAATTTCAGAA------------......ACAATTCGTAATCTTATTTTTCCAAGAAGAAAG
CSP4_STRMT/1-40 ATGAAAAACACAGTTAAT------...---------------TTAGATAAGTTTGTAGAATTGAAGGAAAAAGACTTGCAAAATATTCAAGGTGGGGAGATAAGGCAAACACAT---------AAT......ATTTTCTTTAATTTCTTT------AAAAGAAGA
CSP3_STRMT/1-40 ATGAAAAACACAGTTAAA------...---------------TTGGAACAGTTTGTAGCCTTGAAGGAAAAAGACTTGCAAAAAATTCAAGGTGGGGAGATGAGGAAATCAAAT---------AAT......AATTTCTTTCATTTCTTA------AGAAGAATA
Q9WW44_STRPN/1-41 ATGAAAAACACAGTTAAA------...---------------TTGGAACAGTTTGTAGCTTTGAAGGAAAAAGACTTACAAAATATTAAAGGTGGGGAGATGAGGATTTCAAGA------------......ATCATCCTTGATTTTCTTTTCCTACGAAAAAAG
CSP1_STRMT/1-41 ATGAAAAACACAGTTAAA------...---------------TTGGAACAGTTTGTAGCCTTGAAGGAAAAAGACTTGCAAAAGATTAAAGGTGGGGAAAGTAGACTGCCAAAA------------......ATCCGATTTGATTTTATTTTCCCACGAAAAAAG
CSP2_STRMT/1-40 ATGAAAAACACAGTTAAA------...---------------TTGGAACAGTTTGTAGCCTTGAAGGAAAAAGAATTGCAAAAGATTAAAGGTGGGGAGATGAGGAAACCAGAT---------GGT......GCTTTATTTAATTTATTT------AGAAGAAGA