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PANDIT Protein and Associated NucleotideDomains with Inferred Trees |
PF03043 alignment |
| Q66627_9GAMA/232-761 | RAAGPPEEPSAAALLAPG.LQRPRARVARARGALLRGGLAGPGGARAPEGQDSREPGRLPTDARLPVRAPLLPRGLPGGRGLPREPGAREHGHALSQGGGLQEGPRSQAGQGGSQGGGRR--..........--RALVRVPAAHGRLQDHHVSGGHGPGR--------.---------AARPVRGAPPLER-GPRPAPRTGLP--.............................----AQQGQVRPPGDPGH---........................-----HDVPLGLREGALFEPGERRRP---------LADSFAPVSSLSVH-GFGINVFNTNMVINTKIACDPR--GARYRTVMDIPR-LTNNFVIRKYSVKEPSFTVSVFYSDAACAsGTAINMNISGDYLSFLYAVGNLKCFMPVRTVF-PISVANWNSTLDLQGLENQQLVRRGRSDVFWTTNFPSAVSTQRGSNVSWFKAATATISKVHGPGLVARVYSETAPILTNPRARLNLVKNAIFSTVETRNKAQIQTIHKRFLECLYECASFG------RLDVRAVLRLARGGYFDFSKRIISHTKNKHECAVLGYKKCNLIPKILCDKKKVRLDELGRNAN---FMTFLSSVA---HRNRKLKNRMLRHISRTMGLSWK |
| Q9WRS8_9GAMA/197-727 | KLLEPFKILTLARCPPPC.AKLHLNYLKFNILGFTSDWISHPELHRVQTVIIHNIESNPVLLKNLSKQNKFQDIKVASELIIDYQNIVNQSLDVNLQVKINKKDPGKKPYKVVVVTPKST--..........--YYLTFPPEVPIFRVAMCMSVAEHVCH--------.---------SCDRLYPNTEFLGPGETPRVLEAMF--.............................-----SRIQYAPKDRDYN---........................-FIFNADQNPDRYEQAR-HDHQTEP----------LPDMFDPVKHMSLH-NFKISVFNTNMVINTKITCWSL--AGTFESIIDIPR-LTNNFVMKKFSVKEPSFTVSVFYSDNLCN.GAAINVNISGDMLHFMFAMGNLRCFLPVKHIF-PVSIANWNSTLDLHGLENQYIVRRGRRDVFWTTNFPSVVSSKDGCNVSWFKAATATISKIYGRPLLKKLSDELNPILSVPYARIDQVKNTIFTTLETRNKAQIQTLHKRFIECLVECCSF------LRLDLGALNRAARLGTFDFSKRIISHTKSKHECAILGYKKCNLIPKIYVRSKKIRLDELGRNAN---FMSFIATTG---HAFSNLKPQVIRHTIRRLGLHWR |
| O40924_HHV8/198-728 | ALLESLKHLSFSIMPPAS.PDAQLHFLKFNISSFMATWGWHGELVSLRRAIAHNVERLPTVLKNLSKQSKHQDVKVNGRDLVGFQLALNQ-LVSRLHVKIQRKDPGPKTYRVVVSTPDCT--..........--YYLVYPGTPAIYRLVMCMAVADCIGH--------.---------SCSGLHPCANFLGTHETPRLLAATL--.............................-----SRIRYAPKDRRAA---........................-MKGNLQACFQRYAATDARTLGSST----------VSDMLEPTKHVSLE-NFKITIFNTNMVINTKISCHVP--NTLQKTILNIPR-LTNNFVIRKYSVKEPSFTISVFFSDNMCQ.GTAININISGDMLHFLFAMGTLKCFLPIRHIF-PVSIANWNSTLDLHGLENQYMVRMGRKNVFWTTNFPSVVSSKDGLNVSWFKAATATISKVYGQPLVEQIRHELAPILTDQHARIDGNKNRIFSLLEHRNRSQIQTLHKRFLECLVECCSF------LRLDVACIRRAAARGLFDFSKKIISHTKSKHECAVLGYKKCNLIPKIYARNKKTRLDELGRNAN---FISFVATTG---HRFAALKPQIVRHAIRKLGLHWR |
| UL87_SHV21/195-720 | RLVSALKTLPSTVLATPN.PPDQLEFFKFSILSFMQEWSLNSLLNTTKKKIIAAVHSHPHIVIKLCSQNAFKEIKITDANFIEMQQTVNH-VMPNFHAEITKRDPGSRPLKVSVLLPDGV--..........--KWVIYPPSLPIYRVTMCLASVAAV----------.---------SSDTITSDKQDIR---TASALVSIF--.............................-----RKINYAPKDKKKD---........................-MVLNSKVALDIFRNYIAQKYTEED----------EFMTYRPIHRLGIN-NFKVNVFNTNMVINTKIFTHSV--PWTYKSLMDIPR-LTKNFVFKKYSVKEPSFTVSVFYCENMCN.GAAININISGDLLTFLHAMGNMKCYMPIKNIL-PVSLSNWNSTLDLHGLENQSIVRTGRRDVFWTTNFPSAVSTKLGFNVSWFKAATATISKIYGTSLTSHVTKEVSPIISNNSARLSLLKNNLFSVLESRNRSQIQTLHKRMLECLVALCSF------LRLDSHTVRRLAQKGMFDFSKKTISHAKNKHDCALLGYKKCNMIPKVLSFNKKTRLDEHGRNAN---FLAFISATG---FHVPKIRAKLIKHVLRTLGLHWR |
| O41942_MHV68/188-717 | KLTECFKNVALTKLPVVD.ATFHLEYIKFNIKCFLDQWNDCPDLWVLRRTISANLS-KKHLLATIGRLMSVCEIQLRNPLAYHDHLTMMK-TFPQVTISAQKKPTTCLNQKLEIVMSGTES-..........--MWLVYTPASSMFRIMLCAAYISDIYYNN------.--------TVQQAIYDVTHDKP--SNGEMLMNLY--.............................-----RRIDYLPKDSVET---........................---I-ARVCSTPWENPLIERPPTMY------------HEYCPIKNLSIN-SFKVTIFNTNMVINTKISCKKI--TPRFRSFLDIPR-LTNNFVVKKYSVKEPSFTISVFYSDDLCK.SGAININISGTLIHFLFAMGCLKCFMPIKTIN-PVLISNWNSTFDLQGLENQEIVRTGRHDVFWTTNFPSAVSTKRGYNISWFKAATATVSKIHGGALLDQVRGEISQILLSSDAIINTNKNCIYTTLEKRNRFQIQTLHKRFLECLFESCVA------SKLNYHTVKRLCSTGIFDFSRHIISHSKNKHECALYGYRKCNLVPKILTGTKKTRLDELGRNSN---YLSFNKSPLHHKKDASDFKKRLCLNRRRSNPCQPD |
| O36374_9GAMA/198-722 | LLTYHLKNPSLQRWPHSS.KTVGKTSEEFLLINFLLHWPSSTCLAQLRAKVLKGVKQFPGILQYLSALPVSKAVTVQGLEILKYIECIGL-LFPQWAPVLLKRTPKKFTCVITVVNNHTNSS..........--IWLQFPESGAMLRTALCMAVAKHICR--------.---------EKELISPGKQQLS---LARALVANF--.............................-----EKMQYAPKDFPII---........................------LYPTEIYRPMPVDDQPASD----------IKNSFNALTHISIN-SFKVNVFNTNMVINTNITCLQA--PCCYSQIVNVPK-LVNNFVIKKYSVKEPAFTVSIFYSEDFNL.KAAINVNISGDIINFLLAMNTLKCFLPVTDIF-PASMANWNSTFDLHGLENQHLVRSGRRDVFWTTNFPSVVSSNEGYNVSWFKAATATVSKIHGSDLTKQVQGEIRRLIGHRHARISFCKNKLFATLESRNCAQIQAAHKRFLECLYECCSW------FRANTNALTQLVQCGAFDFSKRIIAHSKSRHECALCGYKVCNSIPKVIINHKKTRLDDCGRNAN---FLSYLHRGA---PHMINTKAKLFKHICRRASLRSY |
| UL87_HHV6U/215-756 | SLLGPKVAQRVIIHFKLL.FGFRHKPHIGTVDSWFWENFFMLELHKLWLTVVKHNRVTTDFFNVVYEKIQNYKQYAIKTLRMSSKAVPAIQRLCLAKFKQQLLYLNIKVTVKKNKREMCL--..........--NGFVYGKTLYVVESSQLIFRNLLLLY--------.---------YDYSLPDECKTN----EENVLTAHY--.............................-----IRVISRLSFKRSRSAL........................PPGVRPDFIFVAQQPKR-KELPNVP----------GGIDFAEITSVRHG-AVTLNAFNTNKVMNLKATIS----KRANFVYHRIPKTMTHSFVMYKHTFKEPAFTVSTFVSNDDLD.MSSLNINIRGPYCDFLYALGVYKMHVSIRDLFLPAFVCNSNNSVDLQGLENQDVVRNRKKKVYWITNFPCMISNANKVNVGWFKAGTGIIPRVSGEDLQNVLLQELNNVREIPGLVFDMDLHQLLVLLEQRNLHQIPFLVKQFLIFLRLGLLMGYGHSRRNKVHDIMLHLISNGLFDFNKNSVANTKIKHGCALVGTRLANNVPKIIARQKKMKLDHMGRNANSLAVLRFIVKSGE-QKNKTVFIKLLEYLAETSTAINTR |
| UL87_HHV7J/214-747 | AFLGPKTSQRIIIHYKLL.FGFRSKPMNFTVS--LLEQVFTLEIQKLYYSVSKHNSTTADFFNVITAKFAEDKYFVLRTFKLSAQITPGIQSFCSLKFKLQTLYLNLKI--MKNTKLSIS--..........--NSFYHGKTLYTLDEKQLVWRNLLLIY--------.---------YGYNLKDNVKQTQ---EESLLSMHY--.............................-----IRILERLSLKSFR---........................--EINQQFSFEIPSYQE-KTLQFIP----------GGNDFAEITSVTHG-ETTVNAFNTNRVMNVKAALS----GEIHCVLHRIPKSMTHSFVMYKRTFKEPSLTVSTFISNDDFT.TSSLNINIRGPYCDFLYALGVYRLHVNIQDFFLPAFVCNSNNSMDLHGLENQGIVRKRKKKVYWITNFPCMISNSEKVNVGWFKAGTGIIPKVSGTDLKNVLLKELISIGEIPNITFDMDLHALLTLLEKRNMHQVPFLIKQFFMFLRLGLLVGYGRKQERKVHHIMLFLIQKGFFDFSKNSVANSKIKHACALVGSRLANNVPKILSKQKKMKLDHLGRNANALTVLRFIVENGY-YKRKTIFRKLLKYLATTSFNAHVQ |
| UL87_HCMVA/229-881 | GYLGEAAAPRIQVHYKLL.FGLNVRPQAPCALD-ATRDFFLLELQKLWLGVEYHHEVTSEFFGRVLAQLHRDRARVMMALRLPEQTVCHLSTFVLSRFKRQVLYFKLQVSYGKCRTGHADRSggggnggnqgHHNLLCYRRLSVTFADTDTVWRNLFYVYYELARDLGsHGTEDRPVSRGYGVSCASRTSRLSPSESTVVSANGHalsstalpttsaghklslprdpaadrvrrYVCIISRLMYARYGERWRKHCqrrsetgeeeeeetlesgetdatpPFDFTGQQLRRAYQEHRRRKHLAVQRYAPCRRKLIGGMEFAEVTGVSLD-RIAVNAFNTNRVINMKAALSSIAASGLGVRAPRLPKNMTHSFVMYKHTFKEPACTVSTFVSNDAVY.INSLNVNIRGSYPEFLYSLGVYRLHVNIDHFFLPAVVCNSNSSLDVHGLEDQAVIRSERSKVYWTTNFPCMISHTNNVNVGWFKAATAIVPRVSGADLEAILLKELSCIKNMRDVCIDYGLHRVFTQLELRNSYQIPFLAKQLVLFLRACLLKLHGREKRLQLDRLVFEAAQRGLFDYSKNLTAHTKIKHTCALIGSRLANNVPKILARNKKVKLDHLGRNANVLTVCRHVEAHKIPRTRLKVLVEVLGALQSISGTPHTR |