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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF03029 alignment
(33 sequences with 321 aa)


Q9RJ74_STRCO/2-169 --GGFGVGKTTMVGSVSEIRPLT-----------------------TEETMTQAGIGVDDNYGSASKTATTVAMD...........................FGRISI----.--TDEL.........-..............--.--.-V...LYLFGTPGQERFWFLWNGLF----------EGALGAVVLVDTRRLEVSFDVMGRLEE----------RGVPFVVAVNTFPD-A--------------------------------....---PRYPVAELRTALDLPEEIPILDCDVRRRASSRDVLMTLMRLLHSL
Q9X833_STRCO/5-174 IAGGFGVGKTTMVGSVSEIAPLR-----------------------TEEPLTAAGLDVDDLAGIEEKRATTVALD...........................FGRITI----.--GRDV.........-..............--.--.-V...LYLFGTPGQQRFWFMWNDLA----------IGALGAVVLVDVRRPESSFAAIDFFER----------RGIPFVVAVNGFHG-R--------------------------------....---HPYPAAEIREALALPEHVQVLLCDARERTSSRDVLIALIDQLIDA
Q9RJQ5_STRCO/2-170 --GGFGVGKTTLVRSVSEIRPLN-----------------------TEEVMTQAGVGVDETGGVTSKTTTTVAFD...........................FGRISL----.--NDRM.........-..............--.--.-V...LYLFGAPGQERFWFLWDRLF----------SGTLGAVVLVDTRRMDDSWYAIDRLEH----------HRTPFVVAVNRFDDDT--------------------------------....---ARHSLDEIRLALALPDHVPLIDCDARVRTSGKHVLVTLVDHLYQL
Q9L140_STRCO/2-170 VVGGFGVGKTTMVRSVSEIRPLN-----------------------TEETMTQAGEAVDDISEVRGKSATTVAFD...........................FGRISL----.--DARN.........-..............--.--.-V...LYLFGAPGQERFWFLWDRLF----------SGTLGAVVLVDTRRIDDSWYAIDRLEH----------HGTPFIVACNDFGG----------------------------------....---PEHSPEAVREALDLDPRVPLVSCDARSRQSSKQVLITLVEHLQAH
Q9KZN3_STRCO/22-191 VAGGFGVGKTTLVGAVSEIRPLR-----------------------TEELLTEAGRPVDDVSGVEGKHTTTVAMD...........................FGRITL----.--REDL.........-..............--.--.-V...LYLFGTPGQERFWFMWDELS----------EGALGAVVLADTRRLEDCFAAIDYFER----------RSIPFVVGVNCFEG-S--------------------------------....---ARYPGETVRQALDLDEDVPLVMCDARDRESVKEVLIGVVQHAMTQ
Q9KZI8_STRCO/25-194 VAGGFGVGKTTLVGAVSEIRPLR-----------------------TEELLSEAGRLVDDTDGIDRKVTTTVAMD...........................FGRITI----.--RSGL.........-..............--.--.-S...LYLFGTPGQDRFWFLWDELA----------QGALGAVVLADTRRLADCFPAVDYFEH----------RHIPFVVAVNCFTG-A--------------------------------....---RRHDEYSVLRALDLDPGTPVVLCDARDRDSGKEVLIRLVEYAGRM
Q9L235_STRCO/2-170 -AGGFGVGKTTFVGAVSEIAPLS-----------------------TEELLTTVSAATDNLDGIENKLETTVAMD...........................FGRLTL----.--DPEH.........-..............--.--.-V...LYLFGTPGQERFWFMWDELC----------EGALGAVIIADTRRLEESFAAVDFFEE----------RGLGFVVAINEFDG-S--------------------------------....---YRYDPEEVRAAMDLHPEIPIVRCDARISSSGVQTLLTLVRHLIAH
O86519_STRCO/2-171 VAGGFGVGKTTFVGAVSEINPLR-----------------------TEAVMTSASAGIDDLTHTGDKTTTTVAMD...........................FGRITL----.--DQDL.........-..............--.--.-I...LYLFGTPGQDRFWFMWDDLV----------RGAIGAIVLVDTRRLADCFPAVDYFEN----------SGLPFVIALNGFDG-Q--------------------------------....---QPYNPDEVREALQIGPDTPIITTDARHRADAKSALITLVEHALMA
Q9XAE1_STRCO/19-188 VAGGFGVGKTTLVTAVSEITPLQ-----------------------TEALMTEASEETDDLTATPGKLTTTVAMD...........................FGRITL----.--DDDL.........-..............--.--.-V...LYLFGTPGQQRFWFMWDDLV----------RGAIGAVVLADTRRLKDCWPALDYFES----------CGLPYVVAVNHFDG-S--------------------------------....---ELFEAEDVREALTIPAHIPVMIMDARRRISAIETLLSLVGHALDE
O50391_MYCTU/18-187 IAGGFGSGKTTFVGAVSEIMPLR-----------------------TEAMVTDASAGVDMLEATPDKRSTTVAMD...........................FGRITL----.--GEDL.........-..............--.--.-V...LYLFGTPGQRRFWFMWDDLV----------RGAIGAIVLVDCRRLQDSFAAVDFFEH----------RNLPFLIAINEFDS-A--------------------------------....---PRYPVSAVRDALTLPAHIPVINVDARNRRSATDALIAVSEYALAT
Q9KYK1_STRCO/2-174 IAGGFGAGKTTAVGAVSEITPLS-----------------------TEEYLTEASADVDSLAGLASKRTTTVAFD...........................FGRLSL----.--PDAP.........-..............--.--.-MpleLFLFGTPGQDRFVDLWYDLS----------RGAVGAVVLVDTRRLESSFTPVSFFED----------IGLPFVVAVNRFDG-A--------------------------------....---HRYHPEQVRAALELPAAVPVVTCDAREPNHVAGVLLALVDHAVNC
Q9KZR9_STRCO/2-172 VAGGFGVGKTTLIGSVSEVRPLR-----------------------MEEPITQASAGVDDLRGTPHKTTTTVAMD...........................FGRIHMA---.--GGRL.........-..............--.--.-A...LYLFGLPGQSRFQPLWEDLA----------EGALGCLVLADTRDLDASHDALGLLDG----------AGIPYAVAINTFPG-S--------------------------------....---PSYPEAELREALALEPATPLTYCDARDRTSSLHALITLTEYLSEH
Q9ADJ3_STRCO/5-174 VVGHFAVGKTTLIGSISEIEPLS-----------------------TEETMTQAAESVDDLKGVQGKTTTTVAMD...........................FGRLTI----.--SDRV.........-..............--.--.-V...LYLFGTPGQQRFVQMWEDMA----------RGALGALVLVDPERLADSFPVIDLIEH----------YGLDYAIAVNHFDG-A--------------------------------....---PLRDQRALREALDLLDDTPVVTCDARDEKSSAAALTTLVRYLLDR
Q9RSE3_DEIRA/8-169 VSGPVGAGKTTFVQTLSETPVVS----------------------------TEADASED-----IGKATTTVAFD...........................FGTLIL----.--DGTE.........-..............--.--.--...LHLYGTPGQDRFDFMWDVLC----------EGALGLVLLVAGNRPQD------FLHARHILEFITSRNPVPFVVGVTRQDLED--------------------------------....----VWSPQDIASYFDLPTEQ-VIGLQATEPDSARQVLIHLLESQLTP
Q9JR11_NEIMA/8-175 FTGPVGVGKTTAIAAISD-----------------------------EALVQTDASASD--MTLDRKRNTTVAMD...........................YGAISL----.--DEDT.........-..............--.--.-K...VHLYGTPGQERFNFMWEILS----------QGSMGLVLLLDNARTNPLKDLEFFLHS-----FRGLLEKAPVVVGITKMDIRS--------------------------------....---QPGIDVYHKYLAKHNLNVPVFEIDARKEDDVKQLVSAMLFSIDPG
Q9V3R3_DROME/28-268 VLGMAGSGKTTFTQKLIQHAQ-EKFNPYVVNLDPACREVPYAAHVDIRDTVNYREVMKQ--YQLGPNGGIVTALN...........................MFTTKM-AQF.--AELV.........R..............RAgERgHK...WCVIDTPGQIEVFNWSASGSIITEGLAT--MFPTIVVYVMDVERSAC---PTTFMSNMLYACSILYKTRLPFLVALNKIDLKD-----CGFVMDWMTDFEAFQEAQEEE------....HSFVSNLTRTMSLTLDTFYENLRTCGVSAKTGVGFTQLLTKILESVDE
GOP2_CAEEL/35-276 VLGMAGSGKTTFVQRLTAFLHARKTPPYVINLDPAVSKVPYPVNVDIRDTVKYKEVMKE--FGMGPNGAIMTCLN...........................LMCTRF-DKV.--IELI.........N..............KRsSD.FS...VCLLDTPGQIEAFTWSASGSIITDSLAS--SHPTVVMYIVDSARATN---PTTFMSNMLYACSILYRTKLPFIVVFNKADIVK-----PTFALKWMQDFERFDEALEDAR-----....SSYMNDLSRSLSLVLDEFYCGLKTVCVSSATGEGFEDVMTAIDESVEA
O42906_SCHPO/13-262 VVGMAGSGKTTFMQQLNAHLHSKNKPPYILNLDPAVRNLPYEANIDIRDTINYKEVMKQ--YNLGPNGGIMTSLN...........................LFVTKF-DQV.--LKIL.........E..............KRaPT.VD...HILIDTPGQIEIFQWSASGSIICDTLAS--SWPTCIAYVVDTPRATS---TSTWMSSMLYACSMLYKAKLPLIIVYNKCDVQD-----SEFAKKWMTDFEEFQQAVTKDEGMSSEg.atSGYMGSLVNSMSLMLEEFYRHLDFVSCSSVTGEGMDDFLEAVKAKVKE
YJ42_YEAST/8-258 CIGMAGSGKTTFMQRLNSHLRAEKTPPYVINLDPAVLRVPYGANIDIRDSIKYKKVMEN--YQLGPNGAIVTSLN...........................LFSTKI-DQV.--IRLV.........E..............QKkDK.FQ...NCIIDTPGQIECFVWSASGAIITESFAS--SFPTVIAYIVDTPRNSS---PTTFMSNMLYACSILYKTKLPMIVVFNKTDVCK-----ADFAKEWMTDFESFQAAIKEDQDLNGDnglgSGYMSSLVNSMSLMLEEFYSQLDVVGVSSFTGDGFDEFMQCVDKKVDE
O49703_ARATH/22-280 VVGMAGSGKTSFLHRLVCHTFDSKSHGYVVNLDPAVMSLPFGANIDIRDTVKYKEVMKQ--YNLGPNGGILTSLN...........................LFATKF-DEVnIPLELV.........QmitdffshcvvsviEKrADqLD...YVLVDTPGQIEIFTWSASGAIITEAFAS--TFPTVVTYVVDTPRSSS---PITFMSNMLYACSILYKTRLPLVLAFNKTDVAD-----HKFALEWMEDFEVFQAAIQSD------....NSYTATLANSLSLSLYEFYRNIRSVGVSAISGAGMDGFFKAIEASAEE
Q9YDX8_AERPE/15-258 VTGTAGAGKSSLVGALADRITSLGANVATLNLDPAAEKLPYDPSVDARDYVSVAELMDK---GLGPNGALVAAVD...........................----SLINHVlDIREEI.........-..............DYySP.-D...YVVVDTPGQLELFAYRVGGPLVLRGIMG--DYNGVNIFLIDSIFIDN---AISLVSALLLASSVAVRLGLPQVNAVSKADMLLPEV--REEVIPRLGEPGFLEFLLEKDKTYEGA....---GKALAEELARAIETTGFIGEVLQASVLEPETVTLLAAKAQQILAG
O58345_PYRHO/9-247 FVGTAGSGKTSLTGAFGEYLEEN-YKVAYVNLDTGVKELPYKPDIDVREFVTVEEIMKE---GYGPNGAIVESYD...........................----RLMNKFdYYLKEI.........-..............LElESkKD...YVLIDTPGQMETFLFHEFGVKLMENLPY-----PLVVYLSDPEILRK---PTDYCFVRFFALLIDLRLGATTVPALNKVDLLKEEQ--LEKHRKYFEDLDYLMGRLKFDPSMQGL....------MAYKMCSIMMEVLPPIRVLYLSAKTREGFEDLETLAYEHYCT
O28074_ARCFU/8-245 FTGTAGSGKTYMTKALADWFDLKKLDYLTVNLDPGADFLPYSADIDVREWFTLEDIMGR--YNVGPNGAQIIGAD...........................-LVSTLIDDI.--RDEI.........-..............QLsSS.-E...YVLIDTPGQLELFTLRESSRVLVNALN---PERSVMVYLFDPVVSKT---PSGFLSMLFMASSAVFRLEIPQVLVLSKSDILSERE--LERIVEWSEDPETLYDSLNLE------....---RKTLNLELFLLLKEAGLFRPLIPASALTGYGMEDIYDAIQEIFYG
O29711_ARCFU/5-228 VLGCAGSGKSTFVRSFSEFLQERGYSVKCVNLDPASD-PAYRADKNVREFVKTENVMVE--YGLGVNGALIKSVE...........................IASEH-----.--AEEL.........-..............--.KAeGD...FVLYDTPGQLELFIYSEAGRKFVRELS---GSFSCSLFLVDLTTVTD---PESLLSAIMQDVIVSLRLSLPTLTAFTKSDVADVDVRSLLGEIKHREGV----------------....---LAELMEKLVDFIELTTIPYRPIKISNIKKTGYEELFSALYELFCA
Q06543_YEAST/8-255 VLGPAGAGKSTFCNSIISHMQTVGRRAHIVNLDPAAEATKYEFTIDIRDLISLDDVMEE--MDLGPNGALIYCFE...........................YLLKNL-DWL.--DEEI.........G..............DF.ND.-E...YLIFDCPGQIELYTHIPVLPNIVRHLTQQLNFNLCATYLLEAPFVID---SSKFFSGALSAMSAMILLELPHINVLSKLDLIKG--DINKKKLKRFLNPDAMLLMETEGMNQASN....-PKFLRLNQCIANLVDDFGMV-QFLPLESNNPDSIETILSYVDDITQW
O14443_SCHPO/8-255 VCGVASSGKSTFCGALMSYMKSVGRSCHLVNLDPAAENFEWEPTVDIRDLISIDDVMEE--LDYGPNGGLIYCFE...........................FLMENL-DWL.--NEEI.........G..............DY.DE.-D...YLIFDMPGQIELYTHVPILPALIRHLQVTLNFRPCAVYLLESQFLVD---RTKFFAGVLSAMSAMVMMEVPHINLLSKMDLLKDNNNITKAELKRFLNTDPLLL--TGEINETTN....-PKFHELNRCIVQLIDDFNMV-NFLPLESGNEESVSRVLSYIDDATQW
Q9SU07_ARATH/7-261 VIGPAGSGKSTYCSSLYEHCETIGRTMHVVNLDPAAEIFNYPVAMDIRELISLEDVMED--LKLGPNGALMYCMEyplfwlhwqlenvtsfvksgleklltlYLEDSLHDWV.--DEEL.........E..............NYrDD.-D...YLIFDCPGQIELFTHVPVLKNFVEHLKQK-NFNVCVVYLLDSQFITD---VTKFISGCMSSLAAMIQLELPHVNILSKMDLLQDKSNIDEYGFLFFP------------------....------LFFSVAVSVGEYGMV-NFIPINLRKEKSIQYVLSQIDVCIQF
Q9UHW5_HUMAN/8-254 VMGPAHAKRSTYCATMVQHCEALNRSVQVVNLDPAAEHFNYSVMADIRELIEVDDVMEDDSLRFGPNGGLVFCME...........................YFANNF-DWL.--ENCL.........G..............HV.ED.-D...YILFDCPGQIELYTHLPVMKQLVQQLEQW-EFRVCGVFLVDSQFMVE---SFKFISGILAALSAMISLEIPQVNIMTKMDLLSKK---AKKEIEKFLDPDMYSLLEDSTSDLR-S....-KKFKKLTKAICGLIDDYSMV-RFLPYDQSDEESMNIVLQHIDFAIQY
Q9VI70_DROME/7-263 IVGPAGSGKSTYCSLMQQYAMDCKRNVQVVNLDPAAEHFTYNPLTDIRDLIHLDDAMEDEELHYGPNGGLIFCLE...........................FLIENQ-EWL.--KEQLcggenelmvG..............EP.DD.-D...YILFDMPGQIELFTHLKMGRQLVELLESW-NFRTCVVFCLDSQFMVD---GAKFISGTMAALSVMANMEQPHINVLTKVDLLSSD---ARKQLEMYLEPDAHSLMGELTIGTGFG....-EKYAKLTQAIGALIEDFSLV-RFFPLDSQDEESVGDLLLQIDSILQY
Q9XW68_CAEEL/7-252 VMGPAGSGKSTYCSVMYNHCLSTGRTLRMVNLDPACEVFNYPAVVDVRDLISVNDVQEDEELILGPNGALVFCME...........................YLVQNL-EWL.--HDEL.........D..............EG.ED.-D...YFVIDCPGQIELYSHLPVMRQIVDALKSW-DFNVCSVFLIDTNFVLD---AEKFISGALTALSAMVAIETPAINVLTKMDLLSER---NKQLVDEFLETDTRSIVDQ--DETVWN....-SKHRKLTRTIAQVLEDYSIV-KFVPLNCEDEESIDQLLLTIDTTIQY
Q08726_YEAST/7-261 VIGPPGSGKSTYCNGCSQFFNAIGRHSQVVNMDPANDALPYPCAVDIRDFITLEEIMQE--QQLGPNGGLMYAVE...........................SLDNSI-DLFiLQIKSL.........V..............EE.EK.-A...YLVFDCPGQVELFTHHSSLFNIFKKMEKELDIRFCVVNLIDCFYMTS---PSQYISILLLALRSMLMMDLPHINVFSKIDMLKSYGE-LPFRLDYYTEVQDLDYLEPYIEKEGSSv..lGKKYSKLTETIKELVSDFNLV-SFEVLSVDDKESMINLQGVIDKANGY
Q9UTL7_SCHPO/7-255 VVGPPGSGKSTYCFGMYQLLSAIGRSSIIVNLDPANDFIKYPCAIDIRKVLDVEMIQKD--YDLGPNGALIYAME...........................AIEYHV-EWL.--LKEL.........K..............KH.RD.-S...YVIFDCPGQVELFTNHNSLQKIIKTLEKELDYRPVSVQLVDAYCCTN---PSAYVSALLVCLKGMLQLDMPHVNILSKADLLCTYGT-LPMKLDFFTEVQDLSYLAPLLDRDKRL....-QRYSDLNKAICELVEDFNLV-SFEVVAVENKASMLRVLRKIDQAGGY
Q9VU67_DROME/20-271 IIGPPGSGKTTYCGEALKFYRELGRQVGVVNLDPANENMSYEPVLSVMELITVEDCMEH--LKLGPNGALMHCAE...........................YLADHLEDWL.--LPAL.........R..............KL.SAtYN...YFLFDCPGQVELYTHHNAMARIFERLERE-RYSLVTVNLIDSHYCSE---PAKFIATLLMALNTMLRMSLPHVNVLSKADLLKKHETKLHFNVDYYTDVLDLKYLLDKLDDDPAM....-RKYRKLNAAICSMVEDYALV-SFQLLDVFSTDSMLRLRNHIDKANGY