EMBL-EBI > Goldman Group

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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF03000 alignment
(13 sequences with 1068 bp)


Q9SA69_ARATH/204-479 TTAGACTGGTGGGGGAAGTCACTAGCTGTTCTGAACCTCGATTTCTTTCAGAGGGTTATCTCTGCGGTTAAGTCTAAAGGG---...TTAATACAAGACGTGATCAGCAAGATTCTGATAAGCTACACGAATAAGTCTCTTCAAgggctcATTGTTCGCGATCCGAAACTGGAGAAAGAAAGG.................................gtt................................................CTTGATTCAGAAGGTAAG------------...---------.............................................---...---...------...------------------AAGAAACAGCGATTGATTGTGGAAACAATTGTGAGGTTACTTCCTACACAAGGAAGAAGAAGCTCT---GTTCCAATGGCGTTTCTTTCAAGTCTTCTCAAAATGGTCATCGCAACATCGTCATCTGCTTCTacaggatcaTGTAGATCAGATCTAGAACGAAGAATCGGTCTGCAATTAGACCAAGCCATCCTCGAAGATGTCTTGATTCCGATAAATCTCAATGGAACAAACAACACCATGTACGACATCGATTCAATCTTGAGAATCTTCTCTATATTCTTGAACCTCGATGAAGACGACGAA---------------------GAAGAAGAACATCATCATCTTCAATTTAGAGATGAAACAGAGATG---------ATCTACGATTTTGACAGCCCCGGGTCTCCAAAACAGAGCTCTATCTTGAAAGTATCGAAGCTAATGGATAACTATCTAGCTGAGATAGCTATGGATCCG---AATCTCACAACCTCAAAGTTCATAGCTTTAGCAGAACTCTTACCAGATCATGCTCGTATCATCAGT.........GATGGACTCTATCGAGCCGTTGACATTTACCTCAAAGTTCATCCGAATATAAAGGATTCAGAGCGTTATCGTCTCTGTAAGACGATAGACTCACAAAAACTATCACAAGAAGCTTGT
O82253_ARATH/205-470 TGTGACTGGTGGGGTCGCTCTCTTCCCATCCTCAAGCTTGATTTCTTCCAGAGAGTTCTCTCCGCCATGAAATCCAAAGGT---...CTCAATCACGACATTATCAGTGACATCCTTATGAGCTACGCTCGCAAATCACTGCAG......ATCATCAGAGAACCGAATCTCGTCAAATCA---....................................................................................---GATTCCGATCTTCAG------------...---------.............................................---...---...------...------------------AGGAAACAGCGAATCGTCCTTGAAGCGGTCGTCGGGCTCCTCCCAACGCAAGCGAACAAAAGCTCG---ATTCCGATCTCGTTCCTCTCTAGCTTGTTGAAGACCGCTATAGGATCTGGCACCTCCGTCTCT.........TGCAGATCCGATCTGGAGAGACGGATCAGCCACCTGCTCGACCAGGCCATCCTTGAAGACATCCTTATTCCGGCGAACATCGGC------------GCCATGTACGACACCGACTCGGTGCAGAGGATTTTCTCAATGTTCTTGAACCTTGACGAGTGCGAGTACAGA------------------GATGATGATGACGACGAGGAGGACGCGGTGGACGAGAGCGAGATG------GCCATGTACGATTTCGAGGGGGCTGAGTCACCGAAACAGAGCTCCATCTTCAAGGTGTCGAAGCTGATGGATAGTTATCTCGCTGAGGTGGCTCTGGACTCG---AGCCTTCCTCCCTCCAAGTTTATAGCACTCGCAGAGCTTCTCCCTGACCATGCTCGCGTCGTCTGC.........GATGGCCTCTACCGAGCCGTTGATATCTTCCTCAAGGTTCACCCCCACATGAAAGATTCGGAACGTTACCGTCTCTGCAAGACAGTCAGCTGTAAGAAACTGTCGCAGGACGCAAGC
Q9SN21_ARATH/148-396 GTTGACTGGTGGGCTGACGATTTAGCTGTTCTAAAGATTGATATGTTTCGACGTGTCTTGGTCGCGATGATCGCTAGAGGG---...TTTAAGAGATACTCACTTGGTCCAGTACTTAAACTCTATGCCGAAAAA---------......------GCTCTTAGAGGGTTGGTGAGATTCTTGaat...........................................................................tttttaACAGAACAATGTGACATTTTTGGGAAAGAGgcaAAGAAG---.............................................---...---...------...ATGGAGGCAGAACAAGAACATGAGAAAAGGTTGATCCTTGAAACAATAGTGAGTCTTCTTCCGAGGGAGAGAAACTCAGTGTCA---------GTTAGTTTTCTTTCGATACTTTTAAGAGCTGCGATATACCTCGAAACCACGGTAGCT.........TGCAGGCTTGATTTGGAGAAGAGAATGGGATTGCAATTAAGACAAGCTGTTATTGATGATCTCTTGATTCCTTATTATTCATTCAATGGAGACAACACAATGTTAGATGTTGATACTGTTCAACGTATCCTCATGAACTATCTTGAGTTT---------------------------------------------------------------GAAGTTGAAGGAAAC------------------------------------------TCTGCTGATTTTGCTAGTGATATTGGTGAATTAATGGAGACTTATCTGGCTGAAATCGCTTCTGATAGA---AACATAAACTTCGCGAAGTTCATCGGTTTTGCTGAATGTATTCCGAAACAGTCTAGG---------.........------ATGTATCGAGCCATTGACATCTTCCTCAAGACACATCCGAATATAAGTGAAGTGGAGAAGAAGAAAGTTTGTAGCTTAATGGACTGTAAAAAGCTATCGCGAGATGTGTAT
Q9SVL5_ARATH/191-433 ACAGAGCTTTGGTTCGAAGATCTAACGGAGTTGAGTTTTCCAATCTTCAGACGTGTGATCTTATCCATGAAGTCGAGTGTC---...CTGAGTCCTGAGATTGTAGAGAGATCTCTACTTACTTACGCGAAGAAA---------......------CACATTCCAGGAATCTCGCGTTCATCGtca..............................................................................gcaTCTTCATCTTCTTCTTCTTCTTCCACCACCataGCTTCCGAG.............................................---...---...------...------------------AATCAACAAAGAGAATTATTAGAGACGATAACTTCAGATCTTCCATTAACTGCGACGACTACGAGA---------------TCTCTCTTCGGTTTGTTACGAGCCGCGATCATTCTCAACGCCTCCGAGAAT.........TGCAGGAAGTTTCTAGAGAAAAAAATCGGATCGAATCTTGAGAAAGCTACGCTTGATGATCTTCTCATTCCAAGT---TACTCGTATCTCAACGAAACGTTATACGATATTGATTTGGTGGAGAGACTCTTACGTCGTTTTCTCGAAAAC---------------------------------------------------------------GTCGCCGTGTCG------------------------------------------------TCGTCGTCATTGACGGTGGTTGGGAGATTGATCGACGGAGTTCTCGGTGAAATTGCATCGGACGCT---AATCTTAAACCGGAACAGTTTTATAATCTGGCGGTTTTGCTTCCGGTTCAAGCACGGGTTTACGAT.........GATGGACTATACAGAGCCGTCGATATATATTTCAAGACTCATTCATGGATATTGGAGGAAGAGAAGGAGAAGATTTGTAGCGTGATGGATTGTAGAAAACTGACTGTTGAAGGATGC
Q9SPB4_ARATH/248-580 CCAGATTGGTGGTTCGAAGATGTCTCCATCTTAAGAATCGATCATTTCGTTCGTGTAATCACTGCAATCAAGGTGAAAGGT---...ATGAGATTTGAACTACTCGGAGCTGTAATAATGCATTACGCCGGAAAA---------......------TGGCTTCCGGGTTTGATCAAAGAAGGAggagttgcaatagctccagcaatgtcctccgccattggaggaggattaggtttaggaggagacgaaatgagtataagctgcggaAGCAACAGCAGCGGAGGAAGCTCCGGACCAgatTGGAAAGGCggtcttcatatggttctctccgccggaaaaacaaacggacatcaaGATtccGTCgctTGTCTCgccGGACTAGGAATCAGTCCAAAAGACCAACGAATGATCGTCGAATCTTTAATCAGCATAATCCCTCCACAGAAAGATTCCGTCACT---------TGTAGCTTTCTCCTCCGTCTTCTTAGAGCAGCAAACATGCTCAAAGTAGCTCCGGCG.........TTGATCACGGAGCTCGAGAAACGCGTAGGGATGCAATTCGAACAAGCGACGCTTCAAGATCTTTTGATTCCTGGT---TATAACAATAAAGGAGAGACAATGTACGATGTTGATCTTGTTCAGAGATTGTTGGAACATTTTCTTGTGCAAGAACAGACGGAAGGATCGAGTCCGAGTCGAATGTCGCCGTCGCCGTCGCAGTCTATGTACGCCGATATCCCGAGAGGGAAT---------AACAACAATGGTGGTGGTGGTGGTGGTAATAATCAGAATGCGAAAATGAGAGTGGCGAGGCTTGTGGATAGTTATCTCACCGAAGTTGCTAGAGATCGG---AATTTGCCGTTGACAAAGTTTCAGGTTTTGGCTGAGGCGTTACCGGAATCTGCTAGGACTTGTGAC.........GATGGACTATACAGAGCCATTGATTCATATCTCAAGGCGCATCCGACATTATCGGAGCATGAGAGGAAACGGCTATGCCGAGTGATGGATTGTCAAAAACTATCAATGGACGCATGT
Q9S9Q9_ARATH/210-481 TCAGACTGGTGGTACGAGGATGCATCGATGCTAAGTTTTCCCCTTTTTAAGAGACTTATCACGGTGATGGAGTCCCGCGGC---...ATTAGAGAAGACATCATCGCTGGCTCCCTAACCTATTACACACGAAAA---------......------CACTTGCCTGGCTTAAAAAGACGACGTggt..............................................................................ggaCCTGAATCTAGTGGTCGTTTCAGCACACCTttgGGCTCAGGG.............................................AAT...---...------...------GTACTGTCCGAGGAAGAGCAGAAGAACTTGCTTGAAGAGATCCAGGAGCTTCTTCGTATGCAAAAAGGTTTAGTTCCA---------ACCAAGTTTTTCGTTGACATGCTTCGAATCGCCAAGATTTTAAAAGCAAGTCCGGAT.........TGCATAGCCAATTTGGAGAAGAGGATAGGGATGCAGCTTGACCAGGCTGCGTTGGAAGATCTTGTAATGCCTAGC---TTTTCTCATACTATGGAGACCCTATACGATGTTGACTCTGTGCAAAGGATCTTGGACCATTTTCTTGGGACAGATCAGATTATGCCTGGT---------------------GGGGTTGGCTCTCCTTGTTCTTCAGTAGATGACGGGAATTTAATCGGA------------------------TCCCCACAGTCAATAACACCAATGACAGCGGTTGCAAAGCTGATTGATGGGTATCTTGCTGAAGTTGCTCCTGATGTC---AATCTTAAGCTTCCAAAGTTCCAAGCTTTAGCTGCTTCTATTCCTGAATACGCCAGACTCTTAGAT.........GACGGACTCTATCGTGCAATAGACATTTATCTAAAGCATCATCCATGGTTGGCGGAAACAGAAAGAGAGAATCTGTGCCGGTTGTTAGATTGTCAGAAACTCTCTTTAGAAGCTTGT
O04344_ARATH/8-267 CCAAATTGGTGGACAGAGGAACTCTGTATCTTAGACGTCGACTTCTTCTCCGATGTCGTATCTTCAATGAAGCAGAGAGGT---...GTCAAACCTTCTTCCTTAGCCTCTGCAATCATCACCTACACAGAGAAA---------......------TCCTTAAGAGATCTCGTCAGAGACCATtca............ggcagagga...................................................gtcaaatatTCCGATCCCGGAGATAACGAATCCGACGAA...AGA------.............................................---...---...------...------------------TCCCAACAGAGAGATCTTGTTCAATCTATCGTCTCTCTTTTACCTTCAGACAAAGGGCTGTTCCCA---------GTCAATTTCCTCTGTTCTCTCCTCCGTTGCGCGGTCTTCTTAGACACTTCCTTGACC.........TGCAAGAACGAGCTCGAGAAGCGAATCTCAGTCGTTCTAGAACACGTCTCCGTCGACGATCTTTTGATCCCGTCT---TTCACCTACGACGGCGAACGGTTACTAGATCTCGATAGTGTCAGAAGAATCATCTCTGCTTTCGTGGAAAAAGAGAAAAACGTTGGT---------------------------------------------GTTTTCAACGGTGGAGACTTCAAC---------------------------AGAGGAGTCTGCTCTGTTTCACTACAAAGAGTAGCTAAAACAGTTGATTCTTACTTAGCGGAGATCGCTACTTACGGA---GACCTAACAATCTCCAAATTCAACGCGATTGCGAATCTTGTCCCGAAATCCGCTAGAAAATCAGAC.........GACGATCTCTACAGAGCTATAGACATCTTCTTGAAAGCTCATCCGAATCTAGACGAGATCGAAAGGGAAAAAGTGTGTAGCTCAATGGATCCCTTAAAGCTTTCTTACGACGCACGT
O64814_ARATH/206-426 AAAGACTGGTGGGTGGAAGATTTATGCGAGCTTCACATCGATTTGTATAAACAAGCCATCAAAGCAATCAAGAACCGAGGTAAA...GTCCCGAGTAACGTTATTGGAGAAGCATTACATGCTTATGCAATAAGA---------......------AGAATAGCTGGTTTTAGCAAAGAGTCC....................................................................................ATGCAACTCATTGAT---------------...---------.............................................---...---...------...---------------------------AGATCTTTGATTAATACAATCATAGAGCTTCTCCCGGATGAGAAAGGAAACATTTCC---------TCTAGCTTCTTGACCAAGCTACATCGAGCATCGATCTTTCTTGGATGTGAAGAAACC.........GTGAAAGAAAAGTTAAAGAAAAGAGTCAGCGAGCAGCTTGAAGAGACAACAGTGAATGATATCTTAATG---------------------------------TATGATTTGGATATGGTGCAGAGCCTAGTGAAGGAGTTTATGAAC------------------------------------------------------------------CGTGATCCGAAA------------------------------------------------ACTCACTCGAAAGTATCCGTGGCAAAGCTCATTGATGGATACTTAGCTGAGAAATCAAGAGATCCT---AATCTCCCTCTTCAGAACTTCCTCTCTCTCGCTGAGACACTCTCTAGCTTCCCAAGACACTCTCAC.........GACGTGTTATATCGCGCAATTGACATGTTTCTAAAGGAACATTCGGGGATTAGCAAGAGCGAGAAGAAGAGAGTATGCGGGCTAATGGATTGTAGGAAACTATCCGCGGAAGCGTGT
Q9SZF2_ARATH/219-447 AGAGACTGGTGGGTTGAGGATCTTTGTGATCTTCATATCGATTTGTATAAACGAGCTCTCGCTACAATCGAAGCGAGAGGGAAT...GTTTCAGCTGATGTTATCGGAGAAGCATTGCACGCGTATGCGATTAAA---------......------AGGATTCCAGGGTTCAGCAAAAGTAGT.................................tca................................................GTACAGGTCACTGACTTT------------...---------.............................................---...---...------...------------------GCTAAATACAGAGCTTTGGCCGATTCAATCATTGAGTTAATTCCTGATGAGAAACGTAGCGTTTCT---------TCGAGTTTCTTGACTAAGTTGTTACGAGCTTCGATCTTTCTTGGTTGTGATGAAGTA.........GCCGGG------TTAAAGAACAGAGTTGGTGAGCGGTTAGATGAGGCGAATTTGGGCGATGTTTTGCTC---------------------------------TATGATGTTGAGTTGATGCAGAGCTTAGTTGAGGTTTTCTTGAAATCC---------------------------------------------------------------CGAGACCCGAGAGAGGAT---------------------------------------GATGTAACCGCAAAAGCATCAGTTGCGAAACTTGTTGATGGTTATTTAGCTGAGAAATCGAGAGATTCCGATAATTTGCCTCTTCAGAAGTTCCTCTCACTTGCGGAAATGGTCTCGAGCTTTCCTAGACAGTCTCAC.........GATGGAGTTTATCGCGCTATCGACATGTTTCTTAAGGAACATCCAGAGATGAACAAGAGCGAGAAGAAGCGTATCTGCAGGCTAATGGACTGCAGAAAACTATCAGCAGAAGCCTGC
O80970_ARATH/206-464 CATGATTGGTGGGTGGAGGATTTGTGCGAACTAGAGATTGATTATTACAAAAGGGTTATAATGAACATCAAAACCAAATGTATA...CTTGGTGGAGAGGTCATTGGAGAAGCTTTGAAAGCTTATGGCTATAGA---------......------AGATTATCAGGTTTTAACAAGGGAGTG....................................................................................ATGGAGCAAGGAGATTTG------------...---------.............................................---...---...------...------------------GTGAAGCATAAGACAATCATTGAGACACTTGTTTGGTTACTACCAGCTGAGAAAAACAGCGTCTCG---------TGTGGTTTCTTGCTTAAACTGTTAAAAGCAGTGACTATGGTGAACTCTGGAGAGGTG.........GTTAAGGAACAACTTGTAAGAAGAATAGGACAGCAACTGGAGGAAGCTTCTATGGCTGAACTCTTGATAAAATCGCATCAAGGA------AGCGAAACATTGTACGATGTGGACTTAGTGCAGAAGATAGTTATGGAGTTCATGAGAAGAGATAAAAACAGTGAGATAGAGGTTCAAGATGATGAAGATGGGTTCGAAGTTCAAGAGGTAAGGAAATTACCAGGGATTTTG---------------------------------------TCTGAAGCTTCAAAGCTGATGGTGGCAAAAGTTATAGATAGTTACCTTACTGAAATTGCAAAAGATCCA---AATCTTCCTGCATCTAAGTTCATTGATGTTGCTGAGAGTGTTACTAGCATCCCCAGACCAGCACAT.........GATGCACTCTACCGCGCTATTGACATGTTTTTGAAGGAACATCCAGGAATCACAAAGGGAGAAAAGAAAAGAATGTGCAAACTTATGGATTGTCGAAAACTCTCGGTAGAAGCGTGT
Q9SZ49_ARATH/136-371 AAAGATTGGTGGGTCGAAGATGTATGTGAGCTAGAGATTGATATGTTCAAGAGGGTGATAAGTGTTGTGAAATCTAGTGGAAGG...ATGAATAATGGCGTAATTGCTGAAGCTCTTAGATACTATGTTGCAAGG---------......------TGGTTACCAGAATCTATGGAGTCTTTG.................................aca................................................TCAGAAGCTTCTTCA---------------...---------.............................................---...---...------...------------------------AACAAAGATCTCGTTGAGACGGTTGTTTTCTTGTTGCCGAAGGTAAACAGAGCAATGAGCTACTCTTCTTGCAGCTTCTTGCTAAAACTCCTTAAAGTTTCGATCTTGGTTGGAGCTGATGAGACG.........GTGAGAGAAGATTTGGTTGAGAACGTGAGTTTGAAGCTTCATGAAGCGTCCGTTAAAGATTTGCTGATC---------------------------------CATGAAGTCGAATTAGTCCATCGGATTGTTGATCAGTTCATGGCGGATGAGAAACGTGTATCT------------------------------------GAAGATGACCGGTACAAGGAGTTTGTTTTA---------------------------------------GGAAATGGAATTTTGTTGAGTGTAGGAAGATTGATTGATGCTTATCTCGCTCTTAACTCTGAACTTACA------------CTCTCTAGCTTTGTTGAGTTATCTGAGTTAGTCCCGGAATCAGCTAGGCCGATACAC.........GACGGTCTCTACAAAGCCATTGACACTTTCATGAAGGAACATCCCGAACTAACAAAATCCGAAAAGAAGAGGCTTTGTGGGTTAATGGACGTGAGGAAACTGACAAATGAAGCATCA
Q9SRQ5_ARATH/131-366 GATACTAGGTTGCTCCAAGATTTGATTACATTACCACTTCGGTTATATGAACCATTGATTCTAGAAGTGAGTAAGCACAAT---...GTCTCGTTAGAAAACCTTGTGGCCTCTGTCTGCAATTACGCGAATAGA---------......------------TGGGTTTTCGAGAAAGATTCG....................................................................................GGAGACGGAAGCGTTTCA------------...---------.............................................---...---...------...------------------AGAAACAAGAGAGAAGGAATTGAAGCTGTTGAGAGGCTTTTGCCTCACCAAAGAGGAACAATCTCG---------TCTGGATTTCTGTTCAAATCGCTGAAAGAATCGATTTTTCTTGGTGCTTGCTCTGAT.........TGCCGAAAAGGGTTTGAAGTTAGGATAAGTAACCAGCTTGACATGGCTAGAGCAAAAGATCTCCAGATTCTGTCA---------CCAACAGAAGATGGATCTTATGACATCGAGCTCTTGAAAACCATTCTCAAGAGCTTCTATAGTAACGAT------------------------------------------------------------AGTGTCCCGGAT------------------------------------------------CTTTCGCGGTTTGTGAGTGTAGCGAGAATGTTGGAAGAGTTTCTGTTGGAGGCTGCTGCGAGTGATGCTGGTTTAAGGGTAGGAACATTCAAGGAACTAGCAGAAATTGCAGTTGCTGCGTCTTGTGATGTGCTGagttactctGATGGAATATACAGAGCGATTGATGTTTACTTGGAGAGGCATAGAGACTTGATTGAATCGGAGAAGATGGAAGCTTGTAGGTTTCTTCATTGTAAGAAACTTTCACCCGAGGCTTGT
Q9SX46_ARATH/166-409 AACGAGTGGTGGTTCGAAGATATGACAAATCTTTCCCCGAAGATCATATTGAAGCTAGTTATGATCATTGGAGCTTACAAAACCaacATAAAAAGCTTAGTCCTAACCAGATTTCTTCTCCATTATCTCAAGACA---------......------AAACTCCAAACCAAATCAAGAACTACC....................................................................................ACTGAGCTTATGAGGAAC------------...---------.............................................---...---...------...---------------AAGCTCGAGTACTCAGATTTAGCTGACACAGCGGTTAGAGGAGTGATTTCCGCAGGGACACGTACGTTTTCT------TGCAGGAAACTCTTCTGGATTCTTCGAGTTTTATCCAGTTTTAGCCTAAGTAGAGAG.........TCAAGAATCGGTTTAGAAACCCTAATAGGAGAAATGCTGGAACAAGCAACACTTGATGATCTTCTGATATCTGCAAGAGGAAGCAGA---GAAAGTGGTTTCTACAATGTTGATCTTGTGATAAGATTACTAAAAGTATTTGTGAAGAACAGAGAA---------------------------------------------------------GAAGAAGAAGAAGAATCA---------------------------------------AGAGAGAGGAATATGAAAGAAATTGGGAAATTGATTGATAAGTATTTGAGAGAAATATCTCCAGATCAG---AATTTGAAAGTCCCCAAGTTTCTTGGTGTTGCAGAGAGCTTGCCGGATTCAGCTAGAGATTGCTTT.........GATGGAGTTTACAGAGCAATTGACATCTATCTACAGGTCAGTTTTTTTTTTTTGTTAAGTTATAAGTTTTACTATTATTTTTTTGTTTTTCTTGAATTTCTTCACCAACTAAATGAT