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Protein and Associated NucleotideDomains with Inferred Trees
(View raw data for PF02991 - MAP1_LC3)
Microtubule associated protein 1A/1B, light chain 3
(Pfam reference: accession no. PF02991)
(Interpro reference: accession no. IPR004241)


sequences alignment phylogeny
amino acids
(Pfam-A seed alignment)
10 sequences @ 117 aa
(ave. pairwise identity: 0.52)
(view Jalview alignment from Pfam)
New Hampshire format
(total tree length: 3.60)
nucleotides
(available for above)
9 sequences @ 351 bp
(ave. pairwise identity: 0.55)
New Hampshire format
(total tree length: 3.15)
amino acids, restricted set
(corresp. to available nt seqs)
9 sequences @ 117 aa
(ave. pairwise identity: 0.50)
New Hampshire format
(total tree length: 3.46)