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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF02987 phylogeny
for nucleotide alignment


 
((((((((Q39801_SOYBN/400-469,Q96271_ARATH/37-106),(((Q39871_SOYBN/353-422,Q39681_DAUCA/51-120),((LE76_BRANA/136-209,(Q9T0H6_ARATH/24-97,LEA1_CICAR/81-154)),LE7_GOSHI/37-110)),(((((O23980_HORVU/42-109,P93614_WHEAT/87-156),LEA1_HORVU/105-178),(LEA3_MAIZE/112-185,O04815_SPOST/48-121)),(LEA1_HORVU/32-101,Q9XFD0_WHEAT/10-79)),((Q39871_SOYBN/280-349,((Q9SDV6_WHEAT/67-136,Q40696_ORYSA/28-97),Q40709_ORYSA/28-97)),((Q43478_HORVU/14-83,UB72_DEIRA/48-117),(DRPF_CRAPL/50-119,UB72_DEIRA/128-197)))))),((DRPF_CRAPL/123-192,Q39660_CHLVU/96-169),Q41060_PEA/245-314)),(((((Q96246_ARATH/137-206,(Q9SIN3_ARATH/295-364,Q96246_ARATH/71-135)),LED8_DAUCA/120-185),((LED8_DAUCA/331-400,Q06431_BETVE/244-309),((((LED8_DAUCA/189-257,LED8_DAUCA/258-323),Q39871_SOYBN/130-199),Q06431_BETVE/174-243),(Q96246_ARATH/214-283,Q9ZTY1_SOYBN/164-233)))),Q41154_9MARC/201-271),((Q96246_ARATH/287-359,(O68678_BACME/31-98,O76508_EIMAC/30-106)),Q41154_9MARC/66-131))),(((((Q9ULG6_HUMAN/488-561,Q19790_CAEEL/373-442),(Q42315_ARATH/2-71,Q9SUB2_ARATH/164-232)),((O16527_CAEEL/5-74,Q9ZRT9_ARATH/52-121),(Q9ZRT9_ARATH/216-285,(Q9XTH4_CAEEL/3-72,Q9XTH4_CAEEL/163-232)))),(((O16527_CAEEL/428-501,(O16527_CAEEL/199-268,O16527_CAEEL/272-341)),(O16527_CAEEL/342-413,O16527_CAEEL/502-570)),((((Q39801_SOYBN/199-265,(Q39801_SOYBN/125-191,Q39801_SOYBN/266-327)),Q39873_SOYBN/255-324),(Q9XTH4_CAEEL/323-392,(Q9VA86_DROME/314-379,Q9VA86_DROME/397-470))),((O16527_CAEEL/119-188,(O16527_CAEEL/647-716,Q9XTH4_CAEEL/76-145)),((Q9SPJ6_SOYBN/36-105,((LEA2_CICAR/81-149,Q9SUB2_ARATH/94-163),(Q40929_PSEMZ/10-79,(LEA1_CICAR/8-77,Q96270_ARATH/9-78)))),Q9SDL9_VICFA/80-149))))),(Q9XES7_SOYBN/64-133,Q9ZPW6_ARATH/378-447))),(LED8_DAUCA/51-116,(O23221_ARATH/190-258,((O23221_ARATH/124-189,Q9ZPW6_ARATH/305-374),(Q9ZPW6_ARATH/232-301,(Q9ZPW6_ARATH/159-228,Q9ZPW6_ARATH/82-151)))))),(Q40869_PICGL/124-190,Q9SVQ4_ARATH/90-156)),Q9SI55_ARATH/111-184,Q9ZPQ7_ARATH/107-180);
((((((((Q39801_SOYBN/400-469:0.63572,Q96271_ARATH/37-106:0.36729):0.29029,(((Q39871_SOYBN/353-422:0.44471,Q39681_DAUCA/51-120:0.39147):0.09830,((LE76_BRANA/136-209:0.29922,(Q9T0H6_ARATH/24-97:0.54546,LEA1_CICAR/81-154:0.29805):0.10806):0.12070,LE7_GOSHI/37-110:0.34335):0.09591):0.08765,(((((O23980_HORVU/42-109:0.15489,P93614_WHEAT/87-156:0.14051):0.14529,LEA1_HORVU/105-178:0.07720):0.07506,(LEA3_MAIZE/112-185:0.08685,O04815_SPOST/48-121:0.18112):0.04121):0.15292,(LEA1_HORVU/32-101:0.13172,Q9XFD0_WHEAT/10-79:0.23670):0.11630):0.11734,((Q39871_SOYBN/280-349:0.37262,((Q9SDV6_WHEAT/67-136:0.41058,Q40696_ORYSA/28-97:0.21250):0.10026,Q40709_ORYSA/28-97:0.19581):0.14918):0.06567,((Q43478_HORVU/14-83:0.48320,UB72_DEIRA/48-117:0.57355):0.19593,(DRPF_CRAPL/50-119:0.41653,UB72_DEIRA/128-197:0.44020):0.06276):0.06870):0.04073):0.09360):0.07626):0.07663,((DRPF_CRAPL/123-192:0.31014,Q39660_CHLVU/96-169:0.59691):0.18562,Q41060_PEA/245-314:0.61650):0.06438):0.10536,(((((Q96246_ARATH/137-206:0.15390,(Q9SIN3_ARATH/295-364:0.44949,Q96246_ARATH/71-135:0.38078):0.19769):0.10553,LED8_DAUCA/120-185:0.26626):0.01882,((LED8_DAUCA/331-400:0.22243,Q06431_BETVE/244-309:0.20259):0.11945,((((LED8_DAUCA/189-257:0.32024,LED8_DAUCA/258-323:0.08937):0.13617,Q39871_SOYBN/130-199:0.24366):0.05577,Q06431_BETVE/174-243:0.27046):0.09308,(Q96246_ARATH/214-283:0.24297,Q9ZTY1_SOYBN/164-233:0.21315):0.15148):0.01960):0.07912):0.04737,Q41154_9MARC/201-271:0.59261):0.12057,((Q96246_ARATH/287-359:0.57055,(O68678_BACME/31-98:0.70090,O76508_EIMAC/30-106:0.36159):0.29255):0.04650,Q41154_9MARC/66-131:0.54109):0.06503):0.09614):0.07901,(((((Q9ULG6_HUMAN/488-561:0.62959,Q19790_CAEEL/373-442:0.51146):0.13211,(Q42315_ARATH/2-71:0.26699,Q9SUB2_ARATH/164-232:0.27485):0.23253):0.11767,((O16527_CAEEL/5-74:0.46796,Q9ZRT9_ARATH/52-121:0.54938):0.08831,(Q9ZRT9_ARATH/216-285:0.57487,(Q9XTH4_CAEEL/3-72:0.34001,Q9XTH4_CAEEL/163-232:0.30823):0.24870):0.06179):0.12350):0.10348,(((O16527_CAEEL/428-501:0.47345,(O16527_CAEEL/199-268:0.20753,O16527_CAEEL/272-341:0.22123):0.12087):0.09717,(O16527_CAEEL/342-413:0.29662,O16527_CAEEL/502-570:0.23289):0.17224):0.03969,((((Q39801_SOYBN/199-265:0.17904,(Q39801_SOYBN/125-191:0.19881,Q39801_SOYBN/266-327:0.12577):0.10284):0.28088,Q39873_SOYBN/255-324:0.28636):0.06235,(Q9XTH4_CAEEL/323-392:0.66992,(Q9VA86_DROME/314-379:0.12955,Q9VA86_DROME/397-470:0.19151):0.36011):0.06058):0.15006,((O16527_CAEEL/119-188:0.43399,(O16527_CAEEL/647-716:0.35565,Q9XTH4_CAEEL/76-145:0.30003):0.09912):0.08700,((Q9SPJ6_SOYBN/36-105:0.49692,((LEA2_CICAR/81-149:0.52939,Q9SUB2_ARATH/94-163:0.25855):0.17440,(Q40929_PSEMZ/10-79:0.47979,(LEA1_CICAR/8-77:0.30066,Q96270_ARATH/9-78:0.30206):0.21566):0.13898):0.04697):0.07064,Q9SDL9_VICFA/80-149:0.54089):0.06064):0.02520):0.08565):0.04959):0.04744,(Q9XES7_SOYBN/64-133:0.58542,Q9ZPW6_ARATH/378-447:0.47666):0.22890):0.01371):0.01501,(LED8_DAUCA/51-116:0.57419,(O23221_ARATH/190-258:0.40966,((O23221_ARATH/124-189:0.26752,Q9ZPW6_ARATH/305-374:0.33223):0.05705,(Q9ZPW6_ARATH/232-301:0.19250,(Q9ZPW6_ARATH/159-228:0.21816,Q9ZPW6_ARATH/82-151:0.18672):0.04554):0.10275):0.06377):0.09968):0.07360):0.16670,(Q40869_PICGL/124-190:0.28468,Q9SVQ4_ARATH/90-156:0.47125):0.23231):0.51067,Q9SI55_ARATH/111-184:0.15641,Q9ZPQ7_ARATH/107-180:0.06189);