EMBL-EBI > Goldman Group

PANDIT Home | Browse PANDIT | Help on PANDIT | Release notes | Pfam



PANDIT Homepage
pan•dit
PANDIT
Protein and Associated NucleotideDomains with Inferred Trees
(View raw data for PF02961 - BAF)
Barrier to autointegration factor
(Pfam reference: accession no. PF02961)
(Interpro reference: accession no. IPR004122)


sequences alignment phylogeny
amino acids
(Pfam-A seed alignment)
3 sequences @ 89 aa
(ave. pairwise identity: 0.62)
(view Jalview alignment from Pfam)
New Hampshire format
(total tree length: 0.84)
nucleotides
(available for above)
3 sequences @ 267 bp
(ave. pairwise identity: 0.60)
New Hampshire format
(total tree length: 0.89)
amino acids, restricted set
(corresp. to available nt seqs)
3 sequences @ 89 aa
(ave. pairwise identity: 0.62)
New Hampshire format
(total tree length: 0.84)