EMBL-EBI > Goldman Group

PANDIT Home | Browse PANDIT | Help on PANDIT | Release notes | Pfam



PANDIT Homepage
pan•dit
PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF02956 alignment
(5 sequences with 2373 bp)


Q9WT88_9VIRU/1-760 ATGGCCTAC---TGGTTCAGAAGGTGGGGCTGGAGGCCGAGGCGCCGGTGGAGAAGGTGG...CGCCGCCGTCGAAGGAGACTACCGAGAAGAAGAACTAGACGAGCTGTTCGCGGCCTTGGAAGAAGACGCAAACCAAGGGTAAGGAGGCGCCGCAGAACTCGCAGACGTACCTACAGACGGGGGTGGAGACGCAGGAGGTACATAAGACGGGGGCGA---------CGCAAAAAGAAACTCATACTGACTCAGTGGAACCCGGCAATAGTTAAGAGGTGCAACATTAAGGGCGGACTTCCAATAATTATATGCGGAGAGCCCAGGGCAGCCTTTAACTATGGCTACCACATGGAGGAC---TACACTCCTCAACCTTTCCCCTTCGGAGGGGGAATGAGCACAGTGACTTTCTCTCTGAAAGCCTTGTATGACCAGTACCTAAAACACCAAAACAGGTGGACTTTCTCAAACGACCAGCTAGACCTCGCCAGATACAGGGGCTGTAAACTAAGGTTCTACAGAAGCCCCGTCTGTGACTTTATAGTACACTACAACCTAATACCTCCACTAAAAATGAACCAGTTCACAAGTCCCAACACGCACCCGGGACTACTCATGCTCAGCAAACACAAGATAATAATTCCCAGCTTTCAAACAAGACCTGGGGGCAGACGCTTTGTTAAAATAAGACTTAATCCCCCCAAACTATTTGAAGACAAGTGGTACACTCAGCAAGACCTGTGCAAGGTTCCGCTCGTTAGTATTACAGCAACTGCGGCTGACTTGCGGTATCCGTTCTGCTCACCACAAACGAACAACCCTTGCACCACCTTCCAGGTACTGCGCAAGAACTACAATACAGTTATAGGAACTTCCGTAAAAGACCAAGAGTCCACACAAGACTTTGAAAATTGGCTTTATAAAACAGACTCACACTATCAAACATTTGCC---ACAGAGGCTCAACTAGGCAGAATTCCTGCATTTAATCCTGATGGCACTAAAAACACTaaaCAGCAGTCGTGGCAAGATAACTGGAGCAAAAAAaattcaCCATGGACAGGTAACTCAGGTACATACCCAcaaACAACCAGTGAAATGTACAAAATTCCATATGACAGTAACTTCGGCTTTCCCACATAC------AGAGCCCAAAAAGACTACATTTTAgaaAGAAGACAGTGCAACTTTAACTATGAAGTTAATAAT---CCA------GTTAGCAAAAAAGTATGGCCACAACCTAGTACAACAACACCCACAGTAGACTACTATGAATACCACTGTGGA------TGGTTCAGCAACATATTCATAGGCCCCAACAGATACAACCTACAGTTTCAAACAGCATATGTAGACACCACATACAACCCACTAATGGACAAGGGCAAAGGCAACAAAATATGGTTTCAATATCTGTCTAAAAAGGGCACAGACTACAATGAAAAA------CAATGCTACTGCACCCTAGAAGACATGCCCCTATGGGCAATATGCTTTGGATACACTGACTATGTAGAGACTCAACTAGGACCCAATGTGGACCATGAAACAGCAGGCTTAATAATTATGATCTGTCCATACACTCAACCACCTATGTATGACAAAAACAGACCTAACTGGGGATACGTAGTCTATGACACAAACTTTGGCAATGGA---AAAATGCCCTCAGGAAGTGGCCAAGTCCCAGTATACTGGCAATGCCGATGGAGGCCCATGCTGTGGTTCCAACAACAAGTACTCAATGACATCTCAAAGACTGGACCGTACGCCTACAGAGACGAA---TATAAAAATGTACAACTGACTCTCTACTACAACTTTATTTTTAACTGGGGGGGCGACATGTATTACCCACAGGTCGTTAAAAACCCCTGTGGAGACTCCGGAATCGTTCCCGGTTCCGGTAGATTCACTCGAGAAGTACAAGTCGTTAGCCCGCTTTCCATGGGACCGGCCTACATCTTCCACTACTTCGACTCCAGACGCGGGTTCTTTAGTGAAAAAGCTCTTAAAAGAATGCAACAACAACAAGAATTTGATGAATCTTTTACATTCAAACCTAAGAGACCCAAACTTTCT------------ACAGCAGCCGCAGAAATCCTCCAGCTCGAAGAAGACTCGACTTCAGGGGAAGGAAAATCGCCA------------------CTACAG---------CAAGAAGAGAAAGAAGTCGAAGTCCTCCAAACGCCGACAGTACAGCTCCAGCTCCAGCGAAACATCCAGGAGCAGCTCGCAATCAAGCAGCAGCTCCAATTCCTCTTGCTCCAACTCCTCAAAACCCAATCCAATTTGCATTTAAACCCACAATTTTTAAGCCCT
Q9QUE1_9VIRU/1-754 ATGGCCTATGGGTGGTGGAGGAGACGCCGCAGAAGG---TGGAAGAGATGGAGGAGAAGGcccAGGTGGAGACGCCCATGGAGGACCCGCAGACGC------AGACCTGCTAGACGCCGTGGACGCCGCAGAACAGTAAGGAGACGGAGGCGCGGGAGGTGGAGGAGGCGC---TATAGGAGG---TGGAGGAGA---------------AAGGGCAGA---CGCGGGAGAAAAAAGAAACTTATAATAAAACAATGGCAGCCAAACTATACCAGAGAGTGCAACATAGTAGGCTACATGCCAGTAATCATGTGTGGAGAGAACACTCTAATAAGAAACTATGCCACACACGCAGACGACTGCTACTGGCCGGGA------CCCTTTGGGGGCGGCATGGCCACCCAGAAATTCACACTCAGAATCCTGTACGATGACTACAAGAGGTTTATGAACTACTGGACCTCCTCAAACGAGGACCTAGACCTCTGTAGATACAGGGGAGTCACCCTGTACTTTTTCAGAAACCCAGATGTAGACTTTATCATCCTCATAAACACCACACCTCCGTTCGTAGATACAGAGATCACAGGACCCAGCATACATCCGGGCATGATGGCCCTCAACAAAAGAGCCAGGTTCATCCCCAGCCTAAAAACTAGACCTGGCAGAAGACACATAGTAAAGATTAAAGTGGGGGCCCCCAAACTGTACGAGGACAAGTGGTACCCCCAGTCAGAACTCTGTGACATGCCCCTACTAACCGTCTACGCCACCGCAGCGGATATGCAATATCCGTTCGGCTCACCACTAACTGACACTCCTGTTGTAACCTTCCAAGTGTTGCGCAGCATGTACAACGACGCCCTTAGCATACTTCCCTCTAACTTTCAAAGCCCAGACAGTCCAGGCCAAAAACTTTACGAACAAATATCTAAGTATTTACCATACTACAACACCACAGAAACAATGGCACAACTAAAGAGATATATAGAAAATACAGAAAAAAATACCacaTCG---------CCAAACCCATGGCAAACAAAA......TATGTAAACACTACTGCCTTCACCACTCCAcaaACTGTTACAACTCAACAG------------------------CCATACACCAGCTTCTCAGACAGCTGGTACAGGGGCACAGTATACacaAACGAAATCACTAAGGTGCCACTTGCCGCAGCAAAA------GTGTATGAAACTCAAACAAAAAACCTGCTGTCTACAACATTTACAGGAGGGTCAGAGTACCTAGAATACCATGGAGGC------CTGTACAGCTCCATATGGCTATCAGCAGGCCGATCCTACTTTGAAACAAAGGGAGCATACACAGACATCTGCTACAACCCCTACACAGACAGAGGAGAGGGCAACATGGTGTGGATAGACTGGCTATCAAAAACAGACTCCAGATATGACAAAACC------CGCAGCAAATGCCTTATAGAAAAGCTACCCCTATGGGCAGCAGTATACGGGTACGCAGAATACTGTGCCAAGAGCACCGGA---GACTCAAACATAGACATGAACGCCAGAGTAGTAATTAGGTGCCCCTACACCACCCCCCAGATGATAGACACCAGCGACGAACTAAGGGGCTTCATAGTATACAGCTTTAACTTTGGCAGGGGC---AAAATGCCCGGAGGCAGCAGCGAGGTACCCATTAGAATGAGAGCCAAGTGGTACCCCTGCCTACTTCACCAAAAAGGAGTTCTAGAAGCCTTAGGACAGTCAGGCCCCTTCGCCTACCACCGCGAC---CAAAAAAAAGCAGTGCTAGGTCTAAAATACAGATTTCACTGGATATGGGGCGGAAACCCCGTGTTTCCACAGGTTGTTAGAAACCCCTGCAAAGACACACACGGT---TCCTCGGGCCCTAGAAAGCCTCGCTCAATACAAATCATTGACCCGAAGTACAACACACCAGAGCTCACAATCCACGCGTGGGATTTCAGACGTGGCTTCTTTGGCCCAAAAGCTATTAAGAGAATGCAACAACAACCAACAGATGCTGAACTTCTTCCACCAGGCCGCAAGAGGAGCAGGCGAGACACCGAAGCCCTCCAAAGCAGCCAAGAAAAGCAG---AAAGAAAGCTTACTTTTCAAACAGCTCCAGCTCCGGCGACGAGTACCCCCGTGGGAAAGCTCGCAGGCCTCGCAGACAGAGGCAGAGAGCGAAAAAGAGCAAGAGGACAGTCTCTCCCAGCAGCTCCGAGAGCAGCTTCACCAGCAAAAGCTCCTCGGCAAGCAGCTCAGGGAAATGTTCCTACAACTCCACAAAATCCAACAAAATCAACACGTCAACCCTACCCTATTGCCAAAA
Q9QUD8_9VIRU/1-755 ATGGCCTATCGGTGGTGGTGGAGGCGACGGAGGCGCCCGTGGAGGAGGAGGAGATGGCGC...CGCTGGAGACGTCGCCGGAGACCCCGCAGACGC------CGACCTCGTCGCCGCTATCGACGCCGCAGAACAGTAAGGAGACGCGGCAGGGGGAGGTGGACTAGGAGA---TATAGACGA---TGGCGCCGC---------------AAGGGCAAA---CGCAGAGGCAAAAAAAAGATTATTATAAAACAGTGGCAGCCCAACTACACTCGGAGATGCAACATAGTGGGCTACCTACCTCTGCTAATCTGTGGAGAAAATACTGTTGCTACAAACTATGCCACCCACTCAGACGACAGCTACTACCCCGGA------CCCTTTGGGGGGGGAATGACTACAGACAAATTTACTCTAAGAATACTGTATGATGAGTACAAGAGGTTTATGAACTACTGGACCGCCTCAAACGAGGACCTAGACCTCTGTAGATACCTAGGACTTACTCTATATGTGTTTAGACACCCAGAAGTAGACTTTATACTAACTATAAATACCTCCCCTCCATTTCTAGACACAGAAATAACAGGGCCTAGCATACATCCAGGTATGATGGCCCTCAACAAAAGAGCCAGGTGGATACCTAGCTTAAAAAACAGACCAGGCAGAAAGCACTATGTAAAGATTAAAGTGGGAGCCCCCCGAATGTTCACAGATAAGTGGTACCCCCAGACAGACCTCTGTGACATGACACTCCTAACGATCTTTGCCAGTGCGGCGGATATGCAATATCCGTTCGGCTCACCACTAACTGACACTATAGTTGTGTCATTCCAAGTTCTGCAATCCATGTACAACGACTGCCTGAGCATACTTCCTGATAATTTTGTAGAACACACAGGCAAAGGCACCCAGCTACATAAAAAAATAATACAACATTTACCCTACTACAACACCACACAAACACAAGCACAATTTAAAAGAGTTGTAGAAAACATGTCAGCA---ACCaatGGA---------AACAATGTATGGGCAAAC---......TACATAAATACTATAAAGTTCACAGACACAcaaACTCCTGAAAATGATTCAGGC------------ATAGGAGGCCCTTACACCAATTATTCAGACTCATGGTACAAAGGCACAGTATACaatAATAAAATTAAAGATATACCTGAAAAAGCAAGTAAA------TTATACTACGACCAAACCAAACAACTAATTGGCATTACATTTACAGGATCCACACACAGACTACACTACTGTGGAGGC------CTATACTCTTCCGTATGGCTATCAGCAGGTAGATCCTACTTTGAAACGAAAGGCCCATACACAGACATCACTTACAACCCCTTTTCAGACAGAGGAGAGGGTAATATGCTATGGATAGACTGGCTAACTAAAAATGACTCATCCTACTCAAAAACA------AGTAGCAAGTGCCTCATAGAAAACTTACCCCTGTGGGCCTCAGTATACGGATACAAAGAGTACTGCAGCAAAGTAACAGGA---GATACAAACATAGAACATAACTGCAGATGTGTTATCAGAAGCCCCTACACAGTACCACAGCTGTTAGACCACAACAATCCCCTCAGAGGTTACGTGCCTTATAGCCTCAACTTTGGAAATGGT---AAAATGCCAGGCGGTAGCAGCCTAGTACCCATTAGAATGAGAGCCAAGTGGTACCCCACTCTGTTCCACCAAAAAGAAGTACTAGAGGCCATAGCACAGGCGGGTCCCTTTGCATACCACTCAGAC---ATTAAGAAAGTATCCCTGGGCATAAAGTACAGATTTAAGTGGGTGTGGGGTGGCAACCCCGTGTCCCAACAGGTTGTTAGAAACCCCTGCAAGACCACCCAAGGT---TCCTCGGGCAATAGAGTGCCTCGATCAATACAAGTCGTTGACCCGCGGTACAACACGCCAGAGCTCACCATACACGCGTGGGACTTCAGACATGGGTTCTTTGGCAGAAAAGCTATTAAGAGAATGCAAGAACAACCAATACCTCATGACACTTTTTCAGCAGGGTTCAGGCGCAGTCGCCGAGATACAGAAGCACTCCAATGCAGCCAAGAAGAGCAACAAAAAGAAAACTTACTTTTCCCAGTCCAGCAGCTCAAGCGA---GTCCCCCCGTGGGAGACCTCGCAAGAGAGCCAAAGCGAGGAAGAAAACTCGCAAAAACAGGAG---ACCCTCTCCCAGCAACTCAGAGACCAGCTGCACAAGCAGCGGCTCATGGGAGAGCAACTCCGATCGCTCCTCTACCAAATGCAGAGGGTTCAACAAAATCAACACATAAACCCTATGTTATTGCCAAAG
Q9WQH0_9VIRU/1-757 ATGGCCTATGGGTGGTGGAGGAGACGCCGGAGGCGC---TGGCGCAGGTGGAGACGCCGA...CCATGGAGGCGCCGCTGGAGGACCCGCAGACGC------AGACCTGCTAGACGCCGTGGCCGCCGCAGAAACGTAAGGAGACGGCGCAGAGGGAGGTGGAGAAGGAGG---TACAGGAGG---TGGAAAAGA---------------AAGGGCAGA---CGTAGAAGAAAAGCAAAAATAATAATAAGACAGTGGCAGCCAAACTACAGAAGAAGATGTAATATAGTGGGCTACCTCCCTATACTTATCTGTGGTGGAAATACTGTTTCTAGAAACTATGCCACACACTCAGACGATACTAACTATCCAGGA------CCCTTTGGGGGAGGCATGACCACAGACAAATTCAGCCTTAGAATACTATATGATGAATACAAAAGATTTATGAACTACTGGACAGCCTCAAATGAGGACCTAGATCTCTGTAGATATCTAGGATGCACTTTTTACTTCTTTAGACACCCTGAAGTAGACTTTATTATAAAAATAAACACCATGCCCCCATTCTTAGATACAACCATAACAGCACCTAGCATACACCCAGGCCTCATGGCCCTAGACAAAAGAGCCAGATGGATTCCTTCTCTTAAAAATAGACCAGGTAAAAAACACTATATAAAAATTAGAGTAGGGGCTCCTAAAATGTTCACAGATAAATGGTACCCTCAAACAGACCTCTGTGACATGACACTGCTAACTATCTATGCAACCGCAGCGGATATGCAATATCCGTTCGGCTCACCACTAACTGACACTGTGGTTGTTAACTCCCAAGTTCTGCAATCCATGTATGATGAAACAATTAGCATATTACCTGATGAAAAAACTAAAAGAAATAGC------------CTTCTTACTTCTATAAGAAGCTACATACCTTTTTATAATACTACACAAACAATAGCTCAATTAAAACCATTTGTAGATGCAGGAGGACACACAACAggcTCA---------ACAACAACTACATGGGGACAA......CTATTAAACACAACTAAATTTACCACTACCacaACAACCACATACACATACCCTGGCACCACAAATACAGCAGTAACATTTATAACAGCCAATGATACCTGGTACAGGGGAACAGCATATaaaGATAACATTAAAGATGTACCACAAAAAGCAGCACAA------TTATACTTTCAAACAACACAAAAACTACTAGGAAACACATTCCATGGCTCAGATGAAACACTTGAATACCATGCAGGC------CTATACAGCTCTATCTGGCTATCACCAGGTAGATCCTACTTTGAAACACCAGGTGCATACACAGACATTAAATATAACCCTTTTACAGACAGAGGAGAAGGCAACATGCTGTGGATAGACTGGCTAAGTAAAAAAAACATGAAATATGACAAAGTG------CAAAGTAAGTGCCTAGTAGCAGACCTACCACTGTGGGCAGCAGCATATGGTTATGTAGAATTCTGCTCTAAAAGCACAGGA---GACACAAACATACACATGAATGCCAGACTACTAATAAGAAGTCCTTTTACAGACCCCCAGCTAATAGTACACACAGACCCCACTAAAGGCTTTGTACCCTATTCTTTAAACTTTGGAAATGGT---AAAATGCCAGGAGGTAGCAGCAATGTTCCCATAAGAATGAGAGCTAAGTGGTACCCCACTTTATCCCACCAACAAGAAGTTCTAGAGGCCTTAGCACAGTCAGGACCCTTTGCTTATCACTCAGAC---ATTAAAAAAGTATCTCTAGGCATAAAATACCGTTTTAAGTGGATCTGGGGTGGAAACCCCGTTCGCCAACAGGTTGTTAGAAATCCCTGCAAGGAACCCCAC------TCCTCGGGCAATAGAGTCCCTAGAAGCATACAAATCGTTGACCCGAGATACAACTCACCGGAACTTACCATCCATGCCTGGGACTTCAGACGTGGCTTCTTTGGCCCGAAAGCTATTCAAAGAATGCAACAACAACCAACTGCTACTGAATTTTTTTCAGCAGGCCGCAAGAGACCCAGAAGGGACACAGAAGTGTATCAGTCCGACCAAGAAAAGGAGCAAAAAGAAAGCTCGCTTTTCCCCCCAGTCAAGCTCCTCCGAAGAGTCCCCCCGTGGGAGGACTCGGAACAGGAGCAAAGCGGGTCGCAAAGCTCAGAGGAAGAGACGGCGACCCTCTCCCAGCAGCTCAAACAGCAGCTGCAGCAGCAGCGAGTCTTGGGAGTCAAACTCAGACTCCTGTTCAACCAAGTCCAAAAAATCCAACAAAATCAAGATATCAACCCTACCTTGTTACCAAGG
Q9QU33_9VIRU/1-663 ATGCCTCCCTTCTACTACCGAAGACGCTGGTACCCA------AACCGGTGGAGACGC---...ACAAGACTACGATTTAGAAGAAGGAGATTTAGA------CGCCCTATTCGCAAACGATTTCGAAGAAGA------------------CGATGGGTAAGAAGACGCCGC---TTTTTTAGA---------------------------TTTAAAAGA---------AAACTAAAAAAAATAAGAATAGACCAATGGCAACCAGAGACTATTAGAAAATGCCATATAAAAGGAAACTTATGCTTATTAACCTGTGGTAGAGGAAATATTAACCATAACTATATACTAACATCAGAAAGC---TATGTACCTACATCAGAACCGGGAGGGGGATCATGGTCAATTTTACAAATCACAACAAGAGTATTATACGATGAATACAGAGCAGCTAGAAATTGGTGGACAAAATCAAACTCATTACTACCACTAACAAAATACATTAGATGTAAGCTAAAATTTTATAGAAGTGACCAAACAGATTACATAGTAACGATACAAAGAACAGGCCCATTTGAAGTTACATTAGACTCATACTTAAGCACACAACCTAGTAGACACTTAATGAACCACAGAGCATTTATAGTACCAAAACTAGGAAGAGGTCCAAACAAAAAAACATACATAAAAAAAATTGTTAAACCACCAGCACTATTCCAAAGTAAGTGGTACTTTTCACAAGACATATACAACACACCACTGTTTATGCTTACAGTATCATCCTGTTCACTAGACCAAATGTTCGCTCCACAAGACCAAATTAGCACAAATATATCACTATTTTCACTTAATACTAATGTTTTTCAAATAAGCAACTGGCACAAACAACCATACACAACAAAAGCATCA---GGA------------ACTCTAGAAACATACTTATACTGTTATCACAATGGTCACCAAGAAGAAGGACAAAAAAAA------------------------------...---------------------TGGGAAAAC---......------------------------------...------ATTGTTTTACTAGGT---------------------AACATGACAAACTACACTGATGGAATAAAATCAACAAAAACACAAataACGAAACCAATAGATTTATTTAAACAAGAAAATAAA------------------ACAAACTGGGGCAATGTTTTTACTAACCTAAACCAAGACCACGATGTAATAATATACTATGGAGGAAAACCTAAAGAAACCGACACATGGCAAAAT---AATGCACCTATTTTACCAATAACAAGTTTATATGTAGAATGCAGATACAATCCTTTTAAAGATAAAGGAACAGGAAACAAAGTTTATTTAGTACCAACAGACTCAGGATTAGGAACATTTTTAACATTACCAACAAAACCAGAATTAATAATACAAGACCTACCATTATGGTTAATAACATGGGGATGGATAGAATGGCTAAAAAAAAGTAGACCA---GTAGCTCACATTCAAGAAGAATACCAAGTAGTAATACAAAGTAAATATATACATCCACAATTACCA------------------TGC---TATGTATTTATAGACAAATACTTTAGACACCCACCAGAAGGACAATTATACAAAACAGAACTATCAGAAACAGACAAAGTACACTGGCACCCAAAATATTCAATGCAAACAGAACAATTAGAACTTATATCAGAAACAGGACCAGCAGCACCAAAAATAAACAACACAAAACAAATAGAGGCACACCTTAACTATGACTTTTTATTCAAGTGGGGAGGAAGCCCAGCTCCAATGGAAGCAATTACAGACCCAGCAGAACAGGAAAAATTCCCCTCGCCCAGTAACCAGCTCCAAGGA---CTTCAGATCGAGAGTCCAGGG---AAACCAAAACAATACTATCTTTACACATTTGACGAAAAACGCAGCGAACTCACAATGCCTGCTGCAAAAAGACTTAAAAAAGACTTTACAACTCCAACATTTTTTACA---------------------------------------GACTTTGGAGCAAAAGACATCCCCCTCAAAACACAAGAGGAAACGGAG------------------------------------------------CAAACATCGGAGGAGGAAGAAATCGAAACATCACTCCCGACAGAAGACCACCTCAAGCAGCAGCTCCAGCGAGCGAGAATCTAC---------TACCGAGAGCGAATCCGAAAGCTCCTAAAAACA---------------------AAAAAATTATTCCCCCCT