EMBL-EBI > Goldman Group

PANDIT Home | Browse PANDIT | Help on PANDIT | Release notes | Pfam



PANDIT Homepage
pan•dit
PANDIT
Protein and Associated NucleotideDomains with Inferred Trees
(View raw data for PF02952 - Fucose_iso_C)
L-fucose isomerase, C-terminal domain
(Pfam reference: accession no. PF02952)
(Interpro reference: accession no. IPR004216)


sequences alignment phylogeny
amino acids
(Pfam-A seed alignment)
8 sequences @ 203 aa
(ave. pairwise identity: 0.27)
(view Jalview alignment from Pfam)
New Hampshire format
(total tree length: 7.11)
nucleotides
(available for above)
7 sequences @ 609 bp
(ave. pairwise identity: 0.41)
New Hampshire format
(total tree length: 4.10)
amino acids, restricted set
(corresp. to available nt seqs)
7 sequences @ 203 aa
(ave. pairwise identity: 0.25)
New Hampshire format
(total tree length: 6.96)