EMBL-EBI > Goldman Group

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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF02933 alignment
(18 sequences with 333 bp)


Y1156_METJA/91-168 GAAGCTAAAAAGGTTGTTTTAGCACCAACT...---------CAACCAATTAGATTCGGCCCAGGATTTGAGGACTTTGTTAAAAGGAAGATATTGGGACAAGTGTTAAGTAAAGGTTCAAAAGTT------------------------------------------------------------------ACTATTGGAGTTTTAGGA............ACTGCTTTAACATTTGTTGTTGTTAGTACAACACCAGCTGGACCT---GTTAGAGTAACTGACTTCACACACGTT---GAGTTAAAAGAAGAGCCAGTCAGTGAA---ATC
SAV_SULAC/125-203 CCAGCAAGTAAAGTAGTGTTAGCACCTACA...---------CAACCAATTAGATTTGACAATAGTTTTGTAGAATATGTAAAAGATACACTAATGGACAAACCATTAGCTAAAGGAGAGACACTT------------------------------------------------------------------CCAATACCAATCTATACG............GGAACCTTAGAACTGACAGTTGTGAATACACAACCCTCAAATTAC---GTTTATGTTACAGGTAGTACAAATATT---GAAATAAGAGAAGAACCAGTAAAAGAGAGCTCA
Q9YC86_AERPE/95-172 CCAGCATCGAAGGTTGTTCTCGCGCCTACA...---------GAGCCTATTAGGTTTGGGAGAGACTTTGTGGAGTACGTTAAGGAGTTTCTCCTGAGGAAGCCTATTAGCAGGGGGGAGACCATA------------------------------------------------------------------ATCGTACCTGTTCTC---............GAAGGCCTTCCCCTGGTCGTCGTCTCCACCCAGCCAGCCCACTTC---GTCTATGTGACGGAGGCTACCGAGGTT---GAGATCAGGGAGAAGCCTGTTAGGGAAGAGATA
Q9V1N2_PYRAB/94-171 GAAGCTAAGAAGGTCACGCTAGCCCCAACA...---------GAGCCCATAAGGTTCGGAAGGGACTTCGTTGAATGGCTCCACGAGAGGCTAGTTGGAAGGCCAGTAGTTAGAGGAGACTACATT------------------------------------------------------------------AAGGTCGGAGTTCTTGGG............CAAGAGCTAACCTTCGTTGTCACGGCAACCCAGCCGAGTGGTGTT---GTCCAGATAACGGAATTCACTGACTTC---AACATCAGCGAGAAGCCAGTGAAGGAA---GTA
Y1297_ARCFU/96-172 CCAGCAGAGAAAGTTACACTCGCTCCAACA...---------GAGCCGGTAAGGCTGATGGGTGGC---GAGGCGTATCTGCTGAGGCTGCTTGAAGGCAGACCGGTCATCAAAGGTCAGAAAATC------------------------------------------------------------------AGGGTTGAGGTTTTCGGT............CACACTCTGACGTTCGTAATAACCGCCACCAGGCCCTCAGGAGTC---GTCGTTGTCACGAGAAACACTGCGATC---GAGCTTAAGGAGAAGCCGGCCGAGGAG---GTA
VAT_THEAC/94-181 ATCGCCAAGAAGGTCACGCTTGCACCGATAataAGAAAGGATCAGAGGCTGAAATTTGGTGAAGGCATTGAAGAATATGTGCAGCGCGCACTCATCAGAAGGCCAATGCTGGAGCAGGACAACATA------------------------------------------------------------------AGTGTACCCGGCCTAACTctagccggccagACAGGTCTGCTCTTCAAGGTCGTCAAGACGCTCCCCAGCAAGGTTCCGGTTGAGATAGGCGAGGAGACAAAGATC---GAGATAAGGGAGGAACCGGCCTCTGAGGTTCTC
Q9V2X2_PYRKO/100-199 GAGGCCAAGAAGGTCGTTCTGGCCCCTGCC...---------CAGAAGGGAGTCTTCATCCAGATTCCTGGGGAGATTGTAAAGCAGAACCTCCTCGGAAGGCCCGTCGTCAAGGGCGACCTCGTAGTGGCCGGTGGACAGAACGAGGCGGTTTACTCGCCCTTTGATGAGCTGCTCAGAGGGTTCTTCGAGGCTATGCCGATCGGCTTC............GGTGAGCTGAAGTTCGTTGTGGTAAACACAGTTCCAAAAGGCATC---GTCCAGATAACCTACAACACCGAGGTC---GAGGTGCTCCCGCAGGCCGTCGAAGTC---AAG
O27676_METTH/96-191 GACGCCCAGAAGGTCGTTCTGGCCCCAGTG...------GACCAGGAGGTCATAATAAGGGGGGAC------------ATAAGATCAGCATTCCTCAACAGGGTACTTGTTAAGGGAGACATAATAGTATCAGGTATCAGACAGCATATATCCGGCGGCGGACTCTTCGACGAGTTCTTCAGGGACTTCATGGACATATCACCCCTC---............GGAGAGATCAAACTGGCCGTCGTATCAACAAGTCCCGCAGGTGTT---GTGCGTGTAACACCCTCAACACAGGTC---GAGATGCAGCAAAAACCCGTGGACGTC---AGC
Q9Y910_AERPE/64-140 ACGGCTACAAAGGTGAAGCTAGCCCCCGTC...------AGCTACACAATGACTGTAGACGAGGGGTTCAAGAGGTATGTGAAGAAGAAGCTCCAGGGAGTGCCTATCACCGAGGGCGACGTGGTT------------------------------------------------------------------GTTGTCCCCGTTATAGGC............CAGGCTGTCCAGCTGCAGGTGGTTGACGCTAGGCCGAAGGGTGCG---GTCATAGTTTCTGAGGAGACGATAGTT---GATGTTCTTGAGAAGCCGGTA---------GCG
O28182_ARCFU/94-186 CCCGCAAAAACCGTAATCCTCGCCCCCCTC...AAGAAGATGGATTTGAGGATTTACGGAGTCGATATTGGGGAGTATCTCAAGCACCAGTTTCTGAAAAGACCGGTTGTTGAAGGAGATTTAGTCCCTCTCGTTGGCTCTCCGGCCCTTTCGGGATTTGGAAGGTACAACCAGCAGAAC------------------------------............CAAGCTGTGGTTTTCGTTGCAGTCAAGACCGAGCCCAAGGGCCCT---GTGGTCATCGACGAGACAACCAAGGTC---GTTTACAGGGACAGACCGGCAAAGGGC---TTC
CDCH_HALSA/91-179 AAAGCGGACACGCTCGTCCTCGCACCCCCC...---GAGGAAGCGAGCGTGCAGTTCGGCAGTGACGCCGCCGGCATGGTCAAACGCCAGATCCTCAAGCGGCCGGTCGTCGCCCGCGACATCGTTCCCGTGATGTCCTCGACGAACCACCCG---------------------------------------TTCATGCGATCCCCAGGC............CAGGCGATCCCATTGATCGCCGTCGAAACGGAGCCTGAGGGCGTC---TGCCTGGTGACCGAGGACACCGACGTC---GAGCTGCGCGAGGAGCCGATCAGCGGC---TTC
SEC18_YEAST/120-206 GATATCTCATTCAGAGCTAGAGGTAAGGCG...------GTAAGCACGGTATTCGATCAAGATGAGTTAGCCAAACAATTTGTTCGTTGCTACGAATCTCAAATATTTTCTCCCACCCAGTACCTTATCATGGAGTTCCAAGGCCAT------------------TTCTTTGACTTAAAAATT---------------------------............AGAAATGTCCAAGCAATCGATTTGGGTGATATTGAACCAACCTCC------GCTGTTGCAACTGGGATAGAGACAAAGGGAATTTTGACAAAACAAACACAAATTAATTTT
SEC18_CANAL/142-230 CTGATTGATTTTAGAGCTAAAGCTAGAGCT...------AATCTGAATCCAATTAATCATGATGAATTGGTGGCTTTATTTTTGAAAAATTATGAAAATCAAATTTTACAACCTACTCAAGTCATTTATATGGAATATACAGGGATT------------------TATTTTCAAATTAGAGTA---------------------------............AACAATGTTCAAATTATTGATGTTAATACTAAAGATCAATTACCAAGTTTCAAAGATTCCGACGATATAAATACCAAAGGGATCTTGATCAAATCTACTGATGTTGGGTTT
Q9U4Y6_MANSE/98-185 GAGGCAGATTTCATGATGAAGAAAACGACA...------TCATTGGAGCCGTACGACTCCGAACAAATGGCACGCGATTTCCTCATTCAGTTTTCGAATCAGGTGTTCACCGTTGGACAGCAATTAGCCTTCTCGTTCCAAGAAAAAAAA---------------GTGTTGTCGTTGATTGTC---------------------------............AAGAATTTGGAAGCTGTGGACGTGCAAGCACTAGCAGCGGGTGTG---AACGCGGTGCCGCGTCGCGTGCGCATG---GGCCGGCTCCTACCGGACGCGTCGGTGCAGTTC
NSF2_DROME/104-190 GAGACGGACTTCCTGCAGAAGAAGACCACC...------ACGCAGGAGCCCTACGACTCCGACGAGATGGCCAAGGAGTTCCTCATGCAGTTCGCCGGAATGCCGCTGACCGTCGGCCAAACGCTCGTCTTTCAGTTCAAAGACAAGAAA---------------TTCCTGGGCCTCGCTGTA---------------------------............AAAACGCTGGAGGCAGTGGATCCCCGAACAGTGGGCGATTCCCTA------CCGAAGACTCGGAACGTACGATTC---GGCCGCATCCTCGGTAACACGGTGGTGCAGTTC
NSF1_DROME/98-185 GAGACGGACTTTCTGCAGAAGAAGACTGTC...------TCCCAGGAACCCTATGACTCCGATCAAATGGCCAAGGAGTTCATCATGCAATTCGCCGGAATGGCACTCACCGTTGGCCAATCACTGGTCTTCAATTTCAAGGACAAGAAA---------------CTTCTCGGCCTGGCCGTC---------------------------............AAATCCCTAGAGGCCATCGATCCCAAGAGCTTGGGCGAGGGCAAG---GACACCGCGATGCGTAATGTCCGCTTC---GGCCGCATCCTTGGCAACACCGTGGTGCAGTTC
O88960_RAT/32-119 GAGATCGACTTCCTGCAGAAAAAGAACATC...------GACTCCAACCCTTACGACACCGACAAGATGGCTGCCGAGTTCATCCAGCAGTTCAACAACCAGGCCTTCTCAGTGGGACAGCAGCTTGTCTTTAGCTTCAATGATAAG------------------CTCTTTGGATTGCTGGTG---------------------------............AAGGACATCGAAGCCATGGATCCCAGCATCCTGAAGGGAGAGCCTGCGTCAGGTAAAAGGCAGAAGATTGAAGTA---GGACTGGTCGTTGGAAACAGTCAAGTTGCATTT
NSF_CAEEL/161-249 ACAGCTGATTTCAATGCCAAAAAGAATGTC...------ACATCTGAACCACTCAACGCCGATTTGATGGCCAGAGAATTCTCGATTCAGTTTGGAGGACAAGCTTTTTCAAAAGGTATGCAAATGGCTTTCCGATTTGAAGATAAAGAGAAGAACAAGACTCACACTCTATCACTTGTTGTC---------------------------............AAATCAATCGAAGGATTTGATATTGGAAAAGCTGCAGCTGCGGCAAGTGGTGCATCCAATACGGACAGTAGTGCC------------------ACCAAACCAAAGCAAATT