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Protein and Associated NucleotideDomains with Inferred Trees
(View raw data for PF02931 - Neur_chan_LBD)
Neurotransmitter-gated ion-channel ligand binding domain
(Pfam reference: accession no. PF02931)
(Interpro reference: accession no. IPR006202)


sequences alignment phylogeny
amino acids
(Pfam-A seed alignment)
115 sequences @ 320 aa
(ave. pairwise identity: 0.28)
(view Jalview alignment from Pfam)
New Hampshire format
(total tree length: 62.06)
nucleotides
(available for above)
109 sequences @ 960 bp
(ave. pairwise identity: 0.41)
New Hampshire format
(total tree length: 45.17)
amino acids, restricted set
(corresp. to available nt seqs)
109 sequences @ 320 aa
(ave. pairwise identity: 0.28)
New Hampshire format
(total tree length: 58.91)