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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF02929 alignment
(22 sequences with 333 aa)


Q9ZBF6_STRCO/1015-1288 EVT.GRGFSVTVDKRTGTISSYE.AKGTRLITS-.GPVPNFWRAPTDNDKGNGQHTRN------QT............WRDAGARRKVTGV----IVRAL.------.--.-.-GDRAVEIKVTGTLPTSV-E-STYGTTYTVFGNGEIKVDNTLHPGAAN-..LPY-IPEVGTMLFLPRGLD.RVHWYGRGPEENHWDRNDGTDVGRYSGTVAEQWTPYIRPQENGNKTDVRWIALTDRHG-------.VGLLASGE-.-PLLEANAS.YFTPEDLSAgVRHDYQLTPRDEVVLRLNHRQMGVGGDNSWGAHTHDEFKLFADRDYAYTYRLR
BGAL_BACME/763-1032 TVT.GTNFTAIFDKRKGQFISYN.YERTELLAS-.GFRPNFWRAVTDNDLGNKLHERC------QT............WRQASLEQHVKKV----TVQPQ.------.--.-.-VDF-VIISVELALDNSL---ASCYVTYTLYNDGEMKIEQSLAPSET--..MPE-IPEIGMLFTMNAAFD.SLTWYGRGPHENYWDRKTGAKLALHKGSVKEQVTPYLRPQECGNKTDVRWATITNDQG-------.RGFLIKGL-.-PTVELNAL.PYSPFELEA.YDHFYKLPASDSVTVRVNYKQMGVGGDDSWQAKTHPNYTLYANRSYTNTFTLK
O85250_THENE/715-982 FVR.SKDTELVFSKFTGLLKRIV.YRGRNILTG-.SIVPNFWRVPTDNDVGNKMPERL------SI............WKRASKERKLFKM----FFWKK.------.--.-.-EENSVSVQSVYQVPG---N-SWVYLTYTIFGNGDILVDLSLIPAEG--..VPE-IPRIGLQFAVPGDFR.FVEWYGRGPHETYWDRKESGLFARYRRTVQDMIHRYVRPQETGNRSDVRWFALSDGR--------.VNLFVSGM-.-PVVDFSVW.PFSMEDLEK.ADHVNELPERDFVTVNVDYRQMGLGGDDSWGAQPHLEYRLLP-EPYRFSFRMR
BGAL_THEMA/715-981 TVE.AKDTVYVFSKLTGLLEQIL.HRRKKILKS-.PVVPNFWRVPTDNDIGNRMPQRL------AI............WKRASKERKLFKM-----HWKK.------.--.-.-EENRVSVHSVFQLPG---N-SWVYTTYTVFGNGDVLVDLSLIPAED--..VPE-IPRIGFQFTVPEEFG.TVEWYGRGPHETYWDRKESGLFARYRKAVGEMMHRYVRPQETGNRSDVRWFALSDGE--------.TKLFVSGM-.-PQIDFSVW.PFSMEDLER.VQHISELPERDFVTVNVDFRQMGLGGDDSWGAMPHLEYRLLP-KPYRFSFRMR
BGAM_LACSK/18-317 GLK.GPDFHYLFSYQTGGPESLR.IQGKEWLYR-.SPKPTFWRATTDNDRGNQFPLKS------GM............WLAADQFIACQSITVAIDGQTI.PLPIAPeNNrYsGRETAQEVTVTYTYQTITTPQTTVEVSYTIQASGKIRVAVTYHGQAG--..LPS-LPVFGLRFVMPTPAT.RFIYQGLS-GETYPDRMAGGIAGEYEVT-GLPVTPYLVPQDCGVHMATDWVTIYRQAVLDNCLHEpVETGLKFKMvDQPFAFSCL.PYTAEELEN.ATHHSELPAPHRTVLNLLGAVRGVGGIDSWGSDVEVAYQIDATQDRHFEFEIS
BGAM_LEULA/18-318 GLQ.GANFHYLFSYERGGLESLV.VNDKEWLYR-.TPTPMFWRATTDNDHGSGFSVKS------AQ............WYAADKFSTCQDIELTVDDQPVtPLPIAPlNNkYtDHEIATKVSLAYHFVTTTVPSTIVTVTYTVTADGQINIATHYSGQSD--..LPE-LPAFGLRFIMPTTAT.GFDYTGLS-GETYPDRLAGATHGQFHVD-SLPVTPYLVPQECGMHMQTEQVTVTRSTTQNNADHDnTPFSLTFSQtDAPFAFSCL.PYTAAELEN.ATHMEELPLARRTVLSIYGAVRGVGGIDSWGTDVEAPYHILANQDIDFSFNIH
BGAM_LACAC/17-316 GIT.GKNFHYLFSYERGGLESLN.INNKEWLYR-.VPTPTFWRATTDNDRGNGFNLKA------SQ............WLGADMFTKCTKIELKVDDRQFdELPIAPiNNqFsNHEYADHVQIAFWYQTLTNPATDVKIIYNIDNTGCINIVMHYFGKKG--..LPP-LPVIGMRFIMPTAAT.GFDYEGLS-GETYPDRMAGAKEGKFHVD-GLPVTKYLVPQENGMHMQTKALKITRSSTLNNADQE.SEFSLKLKQdKQPFNFSCL.PYTAEELEN.ATHLEELPLARRTVLVIAGAVRGVGGIDSWGADVEKQYHINPEKDYEFSFNLN
Q9X6Y5_BIFLO/747-1021 GVR.GAGREVLLSRTQGGMVSYT.FAGNEFVLR-.RPAITTFRPLTDNDRGAGHGFER------VQ............WLGAGRYARCVDN----VLEQI.------.--.-.-DDSTLKGTYTYELATAQ-R-TKVTVSYTAHTDGRVNLHVEYPGEQGD-..LPT-IPAFGIEWTLPVQYT.NLRFFGTGPAETYLDRKH-AKLGVWSTNAFADHAPYLMPQETGNHEDVRWAEITDDHG-------.HGMRVSRADgAAPFAVSLL.PYSSFMLEE.AQHQDELPKPKHMFLRVLAAQMGVGGDDSWMSPVHPQYHIPADKPISLDVDLE
BGAL_LACDE/733-1001 GLK.GNNFQILFSKVKGWPVSLK.YAGREYLKR-.LPEFTFWRALTDNDRGAGYGYDL------AR............WENAGKYARLKDI----SCEVK.------.--.-.-EDS-VLVKTAFTLPVAL-K-GDLTVTYEVDGRGKIAVTADFPGAEE--..AGL-LPAFGLNLALPKELT.DYRYYGLGPNESYPDRLEGNYLGIYQGAVKKNFSPY-RPQETGNRSKVRWYQLFDEK--------.GGLEFTANG.-ADLNLSAL.PYSAAQIEA.ADHAFELT-NNYTWVRALSAQMGVGGDDSWGQKVHPEFCLDAQKARQLRLVIQ
BGAL_STRTR/752-1023 GIQ.GQNFSILLSRAQNTLVSAK.YNGVEFIEK-.GPKLSFTRAYTDNDRGAGYPFEM------AG............WKVAGNYSKVTDT----QIQIE.------.--.-.-DDS-VKVTYVHELPGLS-D-VEVKVTYQVDYKGRIFVTANYDGKAG--..LPN-FPEFGLEFAIGSQFT.NLSYYGYGAEESYRDKLPGAYLGRYETSVEKTFAPYLMPQESGNHYGTREFTVSDDNH-------.NGLKFTALN.-KAFEFSAL.RNSTEQIEN.ARHQYELQESDATWIKVLAAQMGVGGDDTWGAPVHDEFLLSSADSYQLSFMIE
BGAL_ARTSB/730-1013 ELG.----PATFD--AGSLVTLA.----GLPVA-.GPRLELWRAPTDNDKGQGFGAYGPEDPWINSgrgvpapssavvWQQAGLDRLTRRVEDVAALPQG.------.--.-.-----LRVRSRYAAANSEHD-VAVEENWQLSGD-ELWLRIDIAPSAG--..WDLVFPRIGVRLDLPSEVD.GASWFGAGPRESYPDSLHSAVVGTHGGSLEELNVNYARPQETGHHSDVRWVELSRDGAPW-----.LRIEADPDAlGRRPGFSLA.KNTAQEVAL.APHPHELPESQHSYLYLDAAQHGLGS-RACGPDVWPDFALRP-EARTLVLRIR
BGAL_ALTHA/759-1033 SIE.NNTFKLVFNQQSGLIEQWL.QDDTQVISS-.PLVDNFYRAPLDNDIGVSEVDNLDPNAWEAR............WSRAGIGQWQRTCSSINAVQSS.------.--.-.-VDVRITCVFNYEFNGVL-Q-AQTQWLYTLNNTGTISLNVDVNLNDT--..LPP-MPRIGLSTTINKQSDtKVNWLGLGPFENYPDRKSAARFGYYSLSLNELYTPYIFPTDNGLRSDCQLLSI------------.NNLIVTGA-.---FLFAAS.EYSQNMLTQ.AKHTNELIADDCIHVHIDHQHMGVGGDDSWSPSTHKEYLLEQ-KNYNYSLTLT
Q9WXJ2_9GAMM/756-1029 TIS.GDNFTVKMDKQQGVITDWL.VAGEKRLLA-.GPKDNFFRAPLDNDIGTSEANCVDPKAWVSR............WQSAGINDLVCRCLSIEAVTLK.------.--.-.-HQVLINVEFGHYSADKL-I-IATHWQYKIDHHGKVSIAVNVDVAKS--..LPP-LPRIGMELILPKTDK.PVSWFGRGPHENYPDRTLSAHIGRYSCPVEALHTDYIFPSENGLRCDVKEAQV------------.GPLMVTGD-.---FHLAVS.RYQQANIAQ.AKHTNELIDEQQLYLRLDGFHMGVGGDDSWSPSVHQEFLLTK-QHYHYHVVLS
BGAL_KLEPN/759-1032 QIR.AGSQCWTIDRRTGLLSRWS.VGGQEQLLT-.PLRDQFIRAPLDNDIGVSEVERIDPNAWVER............WRSAGLYDLEAHCVQCDAQRLA.------.--.-.-NETLVDCRWHYLRGEEV-V-IVSHWRMHFTADGTLRLAVDGERAET--..LPP-LPRVGLHFQVADQQA.PVSWLGLGPHENYPDRRSSACFARWEQPLAAMTTPYIFPTENGLRCDTQALDW------------.GRWHISGH-.---FHFSVQ.PWSTRQLME.TDHWHKMQAEDGVWITLDGLHMGVGGDDSWTPSVLPQWLLSQ-TRWQYEVSLR
BGAL_ECOLI/748-1021 CIE.LGNKRWQFNRQSGFLSQMW.IGDKKQLLT-.PLRDQFTRAPLDNDIGVSEATRIDPNAWVER............WKAAGHYQAEAALLQCTADTLA.------.--.-.-DAVLITTAHAWQHQGKT-L-FISRKTYRIDGSGQMAITVDVEVASD--..TPH-PARIGLNCQLAQVAE.RVNWLGLGPQENYPDRLTAACFDRWDLPLSDMYTPYVFPSENGLRCGTRELNY------------.GPHQWRGD-.---FQFNIS.RYSQQQLME.TSHRHLLHAEEGTWLNIDGFHMGIGGDDSWSPSVSAEFQLSA-GRYHYQLVWC
BGAL_ENTCL/752-1025 EIA.HRQQRWQFDRASGNLTQWW.RNGVETLLS-.PLTDNVSRAPLDNDIGVSEATKIDPNAWVER............WKAAGMYDLTPRVLHCEAEQHA.------.--.-.-GEVVVTTQHVLEYRGKA-L-FLSRKVWRIDEQGVLHGDIQVDMASD--..IPE-PARIGLSVHLAETPE.NVRWLGLGPHENYPDRKLAAQQGRWTLPLEAMHTPYIFPTENGLRCDTRELVV------------.GMHQLNGH-.---FHFSVS.RYSQQQLRE.TTHHHLLREEPGCWLNLDAFHMGVGGDDSWSPSVSPEFILQT-RQLRYTFSWQ
BGAL_LACLA/719-996 TVR.SAKQKFIFNKSNGNLSRWLdEKGNEKLLH-.ELSEQFTRAPLDNDIGVSEVEHIDPNAWLER............WKGIGFYELKTLLKTMIIQATE.------.--.-.-NEVIISVQTDYEAKGKI-A-FSTIREYHIFRNGELLLKVDFKRNIE--..FPE-PARIGLSLQLAEKAE.NVTYFGLGPDENYPDRRGASLFGQWNLRITDMTTPYIFPSENGLRMETRELNY------------.DRLKVRAMG.-QSFAFNLS.PYSQNQLAK.KGHWHLLEEEAGTWLNIDGFHMGVGGDDSWSPSVAQEYLLTK-GNYHYEVSFK
BGAL_STAXY/723-992 KVSvGKSETYVFNKDNASLESVL.KHNHIVISQ-.NTTNNIWRAPTDNDTNIKND-----------............WAYSGYKDITTRVHDYQIVENE.------.--.-.-TEVSLIFNIAMVNDAVPPV-LFGTVTWHVQRNGTLNVTYDLERDMK--..APY-LPRFGLGLTLPKAFE.QVKYYGKGPFSSYQDKGVANYLDDFGTTVTDNGEIHIRPQETGSHNETTFVEISDGC--------.KKVIVTSD-.-NTFSFNTT.HYSLKQLTE.TTHKDALEPEDQTYLYIDYAQSGIGS-NSCGPELNEAYRLNN-RHIEFSFNLK
BGAL_ACTPL/734-998 NVH.NGQFSYQLDKQKGIFSRIE.KAGKAIIQQ-.PLDFNIWRAPTDNDRLIREA-----------............WQNAGYDKAYTRAYEIQWQQSE.------.--.-.-QAVEFSVKSAIVSISRGRI-LTLDIRYRIFNDGQISVEINAIRPTE--..LPY-LPRFGLRFWLAKAEN.TVEYFGYGEQESYVDKHHLANLGIYHTTAKQNHTDYVKPQENGSHYGCEYLKS------------.ENLFVSAS-.-QPFSFNLS.PYTQEELTE.KKHYYELQESDYSVLCIDYKMSGIGS-NSCGPNLKDQYRLME-SEFKIRFDLI
BGAL_KLULA/750-1023 SVE.SSGLHFILDKLLGKIESLK.VKGKEISSKFeGSSITFWRPPTNNDEPRDFKN----------............WKKYNIDLMKQNIHGVSVEKGS.------.--.-.NGSLAVVTVNSRISPVVFYYGFETVQKYTIFAN-KINLNTSMKLTGEYQ..PPD-FPRVGYEFWLGDSYE.SFEWLGRGPGESYPDKKESQRFGLYDSKDVEEFV-YDYPQENGNHTDTHFLNIKFEGA-------.GKLSIFQKE.-KPFNFKISdEYGVDE---.AAHACDVKRYGRHYLRLDHAIHGVGS-EACGPAVLDQYRLKA-QDFNFEFDLA
Q9ZBD1_9PSEU/972-1248 EVS.APDFTYTFDREAGTLTGMT.ANGQQHLVR-.GPQLDVFRAPIGNEWSDWSGLAPE-----AQ............FRAVGLDRLRTEVTDFTVSQPA.------.--.-.PDQVRVSVRTDVSAPDVPDDGFRSTWVYTVDGTGAITIDHQVDAYGERMraLPW-LPRVGMSMAVPDSFG.QLDWYGRGPGESYPDRKDAQHIGRWSQTVDESWFDFLPPQDNGVKTDTWWAVLSGDR--------.GGLQVSGD-.--RLAIAAD.RFSNAER--.TDFAHQLRRDDFVTLHVSAAVTGLG---DTPVPVQPEYRVAPDQQHSYSVTLR
BGA2_ECOLI/727-998 TVR.GYNFAITFSKMSGKPTSWQ.VNGESLLTR-.EPKINFFKPMIDNHKQEYEGL----------............WQPNHLQIMQEHLRDFAVEQSD.------.--.-.-GEV-LIISRTVIAPPVFDFGMRCTYIWRIAADGQVNVALSGERYGD--..YPHIIPCIGFTMGINGEYD.QVAYYGRGPGENYADSQQANIIDIWRSTVDAMFENYPFPQNNGNRQHVRWTALTNRHG-------.NGLLVVPQ-.-RPINFSAW.HYTQENIHA.AQHCNELQRSDDITLNLDHQLLGLGS-NSWGSEVLDSWRVWF-RDFSYGFTLL