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Protein and Associated NucleotideDomains with Inferred Trees
(View raw data for PF02926 - THUMP)
THUMP domain
(Pfam reference: accession no. PF02926)
(Interpro reference: accession no. IPR004114)


sequences alignment phylogeny
amino acids
(Pfam-A seed alignment)
50 sequences @ 128 aa
(ave. pairwise identity: 0.20)
(view Jalview alignment from Pfam)
New Hampshire format
(total tree length: 46.86)
nucleotides
(available for above)
49 sequences @ 384 bp
(ave. pairwise identity: 0.37)
New Hampshire format
(total tree length: 29.37)
amino acids, restricted set
(corresp. to available nt seqs)
49 sequences @ 128 aa
(ave. pairwise identity: 0.20)
New Hampshire format
(total tree length: 46.30)