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Protein and Associated NucleotideDomains with Inferred Trees
(View raw data for PF02900 - LigB)
Catalytic LigB subunit of aromatic ring-opening dioxygenase
(Pfam reference: accession no. PF02900)
(Interpro reference: accession no. IPR004183)


sequences alignment phylogeny
amino acids
(Pfam-A seed alignment)
48 sequences @ 422 aa
(ave. pairwise identity: 0.23)
(view Jalview alignment from Pfam)
New Hampshire format
(total tree length: 29.83)
nucleotides
(available for above)
48 sequences @ 1266 bp
(ave. pairwise identity: 0.38)
New Hampshire format
(total tree length: 21.33)
amino acids, restricted set
(corresp. to available nt seqs)
48 sequences @ 422 aa
(ave. pairwise identity: 0.23)
New Hampshire format
(total tree length: 29.83)