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Pfam
pandit
PANDIT
P
rotein and
A
ssociated
N
ucleotide
D
omains with
I
nferred
T
rees
(View raw data for PF02896 - PEP-utilizers_C)
PEP-utilising enzyme, TIM barrel domain
(
Pfam
reference: accession no.
PF02896
)
(
Interpro
reference: accession no.
IPR000121
)
sequences
alignment
phylogeny
amino acids
(Pfam-A seed alignment)
17 sequences @ 381 aa
(ave. pairwise identity: 0.38)
(view Jalview alignment from Pfam)
New Hampshire format
(total tree length: 8.85)
nucleotides
(available for above)
16 sequences @ 1143 bp
(ave. pairwise identity: 0.47)
New Hampshire format
(total tree length: 6.52)
amino acids, restricted set
(corresp. to available nt seqs)
16 sequences @ 381 aa
(ave. pairwise identity: 0.38)
New Hampshire format
(total tree length: 8.46)