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Pfam
pandit
PANDIT
P
rotein and
A
ssociated
N
ucleotide
D
omains with
I
nferred
T
rees
(View raw data for PF02892 - zf-BED)
BED zinc finger
(
Pfam
reference: accession no.
PF02892
)
(
Interpro
reference: accession no.
IPR003656
)
sequences
alignment
phylogeny
amino acids
(Pfam-A seed alignment)
33 sequences @ 65 aa
(ave. pairwise identity: 0.33)
(view Jalview alignment from Pfam)
New Hampshire format
(total tree length: 23.98)
nucleotides
(available for above)
32 sequences @ 195 bp
(ave. pairwise identity: 0.41)
New Hampshire format
(total tree length: 16.46)
amino acids, restricted set
(corresp. to available nt seqs)
32 sequences @ 65 aa
(ave. pairwise identity: 0.33)
New Hampshire format
(total tree length: 23.67)