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PANDIT Protein and Associated NucleotideDomains with Inferred Trees |
PF02867 alignment |
| RIR1_ECOLI/222-736 | FSSCVLIECG--DSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGG-VRGGAATLFYPMWHLEVESLLVLKNNRG--.VEGNRVRHMDYGVQINKLMYTRLLK------GEDITLFSPSDVPG.LYDAFFADQEE.......-FERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNT-HSPFDPAIAPVRQSNLCLEIALPTKP----LNDVNDENGEIALCTLSAFNLGAINN---------------LDELEELAILAVRA...........LDALLDYQDYP-IPAAKRGAMG........RRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQG---ACPWFNETTYAKG------------ILPIDTYKKDLDTIANE.PLHYDWEALRESIKT................HGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDG----------------ILRQVVPDYEHLHD----------AYELLWEMP--------GNDG--YLQLVGIMQKFIDQSISANTNYDPSRFpsGKVPMQQLLKDLLTAYKFGVKT-LYYQNTRD |
| RIR1_BPT4/219-732 | FSSCVVIEAG--DSLKSINKASASIVEYISKRAGIGINVGMIRAEGSKIGMGEVRHTGVIPFWKHFQTAVKSCSQGG-IRGGAATAYYPIWHLEVENLLVLKNNKG--.VEENRIRHMDYGVQLNDLMMERFGK------NDYITLFSPHEMGGeLYYSYFKDQDR.......-FRELYEAAEKDPNIRKKRIKARELFELLMTERSGTARIYVQFIDNTNN-YTPFIREKAPIRQSNLCCEIAIPTN-------DVNSPDAEIGLCTLSAFVLDNFDWQ-------------DQDKINELAEVQVRA...........LDNLLDYQGYP-VPEAEKAKK-........RRNLGVGVTNYAAWLASNFASYED--ANDLTHELFERLQYGLIKASIKLAKEKG---PSEYYSDTRWSRG------------ELPIDWYNKKIDQIAAP.KYVCDWSALREDLKL................FGIRNSTLSALMPCESSSQVSNSTNGYEPPRGPVSVKESKEG----------------SFNQVVPNIEHNID----------LYDYTWKLAKK------GNKP--YLTQVAIMLKWVCQSASANTYYDPQIFpkGKVPMSIMIDDMLYGWYYGIKN-FYYHNTRD |
| RIR1_YEAST/215-747 | MSSCFLVAMKE-DSIEGIYDTLKECALISKTAGGIGLHIHNIRSTGSYIAGTNGTSNGLIPMIRVFNNTARYVDQGGNKRPGAFALYLEPWHADIFDFIDIRKNHG--.KEEIRARDLFPALWIPDLFMKRVEE------NGTWTLFSPTSAPG.-LSDCYGD---.......EFEALYTRYEKEGRGK-T-IKAQKLWYSILEAQTETGTPFVVYKDACNR--KSNQKNLGVIKSSNLCCEIVEYSAP----------D--ETAVCNLASVALPAFIETS--ED--GKTSTYNFKKLHEIAKVVTRN...........LNRVIDRNYYP-VEEARKSNMR........HRPIALGVQGLADTFMLLRLPFDSEEARLLNIQIFETIYHASMEASCELAQKD---GPYETFQGSPASQG-----------------ILQFDMWDQKP-.YGMWDWDTLRKDIMK................HGVRNSLTMAPMPTASTSQILGYNECFEPVTSNMYSRRVLSGEFQVVNPYLLRDLVDLGIWDEGMKQYLITQ----NGSIQGLPNVPQELKDL-YKTVWEISQKTIINMAADRSVYIDQSHSLNLFLRAPT-..----MGKLTSMHFYGWKKGLKTGMYYLRTQA |
| RIR1_SCHPO/215-742 | LSSCFLVTMKD-DSIEGIYDTLKMCAMISKTAGGIGINIHNIRATGSYIAGTNGTSNGIVPMIRVYNNTARYVDQGGNKRPGAFAAYLEPWHADVMDFLELRKTHG--.NEDFRAREMFYALWIPDLFMQRVER------NEQWTFFCPNEAPG.-LADVWGD---.......EFVALYEKYEKENRGRRS-LPAQKVWYAILQSQVETGNPFMLYKDSCNR--KSNQKNVGTIRCSNLCTEIVEYSSP----------D--EVAVCNLASVALPTFIKDG--K--------YNFQKLHDVVKVVTRN...........LNKIIDVNYYP-VPEARRSNMR........HRPVGLGVQGLADAFFALRLPFESAGAKKLNIQIFETIYHAALEASCEIAQVE---GTYESYEGSPASQG-----------------ILQYDMWNVNP-.TDLWDWAELKEKIAK................HGIRNSLLVAPMPTASTSQILGFNECFEPYTSNMYQRRVLSGEFQIVNPWLLKDLVERDLWNEDMKNKLVML----DGSIQAIPEIPQDLKDL-YKTVWEISQKTVIDYAADRGPFIDQSQSLNIHLKDPS-..----YGKITSMHFYGWKKGLKTGMYYLRTMA |
| RIR1_VACCC/215-741 | MSSCFLLNMID-DSIEGIYDTLKRCALISKMAGGIGLSISNIRASGSYISGTNGISNGIIPMLRVYNNTARYIDQGGNKRPGVMAIYLEPWHSDIMAFLDLKKNTG--.NEEHRTRDLFIALWIPDLFMKRVKD------DGEWSLMCPDECPG.-LDNVWGD---.......EFERLYTLYERERRYKSI-IKARVVWKAIIESQIETGTPFILYKDACNK--KSNQQNLGTIKCSNLCTEIIQYADA----------N--EVAVCNLASVALNMFVIDG----------RFDFLKLKDVVKVIVRN...........LNKIIDINYYP-IPEAEISNKR........HRPIGIGVQGLADAFILLNYPFDSLEAQDLNKKIFETIYYGALEASCELAEKE---GPYDTYVGSYASNG-----------------ILQYDLWNVVP-.SDLWNWEPLKDKIRT................YGLRNSLLVAPMPTASTAQILGNNESVEPYTSNIYTRRVLSGEFQVVNPHLLRVLTERKLWNDEIKNRIMAD----GGSIQNT-NLPEDIKRV-YKTIWEIPQKTIIKMAADRGAFIDQSQSMNIHIADPS-..----YSKLTSMHFYGWSLGLKTGMYYLRTKP |
| RIR1_HUMAN/215-743 | LSSCFLLSMKD-DSIEGIYDTLKQCALISKSAGGIGVAVSCIRATGSYIAGTNGNSNGLVPMLRVYNNTARYVDQGGNKRPGAFAIYLEPWHLDIFEFLDLKKNTG--.KEEQRARDLFFALWIPDLFMKRVET------NQDWSLMCPNECPG.-LDEVWGE---.......EFEKLYASYEKQGRVRKV-VKAQQLWYAIIESQTETGTPYMLYKDSCNR--KSNQQNLGTIKCSNLCTEIVEYTSK----------D--EVAVCNLASLALNMYVTSE--H-------TYDFKKLAEVTKVVVRN...........LNKIIDINYYP-VPEACLSNKR........HRPIGIGVQGLADAFILMRYPFESAEAQLLNKQIFETIYYGALEASCDLAKEQ---GPYETYEGSPVSKG-----------------ILQYDMWNVTP-.TDLWDWKVLKEKIAK................YGIRNSLLIAPMPTASTAQILGNNESIEPYTSNIYTRRVLSGEFQIVNPHLLKDLTERGLWHEEMKNQIIAC----NGSIQSIPEIPDDLKQL-YKTVWEISQKTVLKMAAERGAFIDQSQSLNIHIAEPN-..----YGKLTSMHFYGWKQGLKTGMYYLRTRP |
| RIR1_CAEEL/221-749 | MSSCFLLTMSE-DSILGIYDTLKQCALISKSAGGIGLNVHKIRATGSVIAGTNGTSNGLIPMLRVYNNTARYVDQGGNKRPGAFAIYLEPWHADIFEFVSLRKNTG--.PEEERARDLFLALWIPDLFMKRVEK------DQEWSLMCPCECPG.-LDDCWGE---.......EFEALYAKYEAEGRVRKT-VKARKLWEHIVSNQIETGLPYITYKDAANR--KSNQQNLGTIKCSNLCTEIIEYSAP----------D--EIAVCNLASIALNRYVTPE--K-------KFDFVKLAEVTKVITRN...........LNKIIDVNYYP-VEEARNSNMR........HRPIGLGVQGLADCFMLMRYPFTSAEARDLNKRIFETIYYAALEASCELAELN---GPYSTYEGSPVSKG-----------------QLQFDMWGVTP-.TDQCDWATLRKKIAK................HGIRNSLLMAPMPTASTAQILGNNESIEPYTSNIYSRRVLSGDFQIVNPHMLKDLVERGLWTDEMKNRLIAN----NGSIQNIDGIPSDIKEL-YRTVWEISQKDIIEMAADRGAYIDQSQSLNIHMAKPS-..----YAGITSMHFYGWKKGLKTGMYYLRTKP |
| RIR1_ASFB7/190-753 | LSSCFLLNVN--DNLENLYDMVKTAGIISGGGGGIGLCLSGIRAKNSFISGSGLRSNGIQNYIMLQNASQCYANQGG-LRPGAYAVYLELWHQDIFTFLQMPRLKGQMaEQRLNAPNLKYGLWVPDLFMEILEDQIHNRGDGTWYLFSPDQAPN.-LHKVFDLERSqhenahrEFKKLYYQYVAEKRYTGV-TTAKEIIKEWFKTVIQVGNPYIGFKDAINR--KSNLSHVGTITNSNLCIEVTIPCWEG---------DKAEQGVCNLAAVNLAAFIREN----------GYDYRGLIEASGNVTEN...........LDNIIDNGYYP-TEATRRSNMR........HRPIGIGVFGLADVFASLKMKFGSPEAIAMDEAIHAALYYGAMRRSIELAKEK---GSHPSFPGSAASKG-----------------LLQPDLWVRCG-.DLSSSWEERVAQTTQgvltrkswwqlrlaamQGVRNGYLTALMPTATSSNSTGKNECFEPFTSNLYTRRTLSGEFIVLNKYLIDDLKEIDLWTEAIQQQLLNA----GGSIQHILDIPAEIRDR-YKTSREMNQKILTKHAAARNPFVSQSMSLNYYFYEPE-..----LSQVLTVLVLGWKKGLTTGSYYCHFSP |
| RIR1_VZVD/213-756 | TASCYLMDPESITVGRAVRAITGDVGTVLQSRGGVGISLQSLNLIPTEN-----QTKGLLAVLKLLDCMVMAINSDC-ERPTGVCVYIEPWHVDLQTVLATRGMLVR-.DEIFRCDNIFCCLWTPDLFFERYLSYLKGASNVQWTLFD-NRADI.-LRTLHGE---.......AFTSTYLRLEREGLGVSS-VPIQDIAFTIIRSAAVTGSPFLMFKDACNRNYHMNTQG-NAITGSNLCTEIVQKADA----------H--QHGVCNLASINLTTCLSKG--P------VSFNLNDLQLTARTTVIF...........LNGVLAAGNFP-CKKSCKGVKN........NRSLGIGIQGLHTTCLRLGFDLTSQPARRLNVQIAELMLYETMKTSMEMCKIGG-LAPFKGFTESKYAKG-----------------WLHQDGFSTIS-.YLDLPWCTLRDDICA................YGLYNSQFLALMPTVSSAQVTECSEGFSPIYNNMFSKVTTSGELLRPNLDLMDELRDMYSCEEKRLEVINILEKNQWSVIRSFGCLSNSHPLLKYKTAFEYEQEDLVDMCAERAPFIDQSQSMTLFIEERPD..GTIPASKIMNLLIRAYKAGLKTGMYYCKIRK |
| RIR1_EHV1B/221-771 | LASCYLLNPRVTDMNSAMLALMEEAGPILCNRGGIGLSLQRFNTPPKEG-----CSRGVMALLKLIDSMTMAINSDG-ERPTGVCVYFEPWHADIRAILNMRGMLAR-.DETVRCDNIFACMWTPDLFFDRYQRYLDGESGVMWTLFD-DTASH.-LCHMYGK---.......EFEEEYERLEQCGFGVDS-IPIQDMAFIIVRSAVMTGSPFLMFKDACNKHYHFDLRRKGAIMGSNLCTEIIQHADE----------T--QNGVCNLASINLPKCLAIP--PPHTAGVPYFDFAALGRAAATATIF...........VNSMMRAGTYP-TVKSQRGVDE........NRSLGLGIQGLHTAFLMLDLDMASPEARQLNKQIAERLLLNSMKASATLCRLG--MKPFKGFEDSKYSLG-----------------ELPFDSYPGVTL.ANRNAWRRLRTEIKQ................HGLYNSQFVAYMPTVSSSQVTESSEGFSPVYTNLFSKVTATGEVLRPNLLLMRTIRSIFPRECARLQALSTLEMAQWSVVGAFGDLPVGHPLSKFKTAFEYDQRTLIDMCADRAPFVDQSQSMSLFITEPAD..GKLPASKIMSLLVHAYKRGLKTGMYYCKIKK |
| RIR1_HHV11/579-1117 | TSSCYLVNPQATTNKATLRAITSNVSAILARNGGIGLCVQAFNDSGPG-------TASVMPALKVLDSLVAAHNKES-ARPTGACVYLEPWHTDVRAVLRMKGVLAG-.EEAQRCDNIFSALWMPDLFFKRLIRHLDGEKNVTWTLFDRDTSMS.-LADFHGE---.......EFEKLYQHLEVMGFGEQ--IPIQELAYGIVRSAATTGSPFVMFKDAVNRHYIYDTQG-AAIAGSNLCTEIVHPASK----------R--SSGVCNLGSVNLARCVSR----------QTFDFGRLRDAVQACVLM...........VNIMIDSTLQP-TPQCTRGNDN........LRSMGIGMQGLHTACLKLGLDLESAEFQDLNKHIAEVMLLSAMKTSNALCVRG--ARPFNHFKRSMYRAG-----------------RFHWERFPDARP.RYEGEWEMLRQSMMK................HGLRNSQFVALMPTAASAQISDVSEGFAPLFTNLFSKVTRDGETLRPNTLLLKELERTFS-GKRLLEVMDSLDAKQWSVAQALPCLEPTHPLRRFKTAFDYDQKLLIDLCADRAPYVDHSQSMTLYVTEKAD..GTLPASTLVRLLVHAYKRGLKTGMYYCKVRK |
| RIR1_SHV21/189-715 | LSSCFIIAPTLDTEKSTISSIFGELAPLLASRSGVGVDVTKFSFGGKN----------IHSCLKLINAQVEFFNDKS-VRPVSVATYIEVWHCQIHEFLSAKLPEN--.PD--RCNSIFQGVCVPSLFFKMYES----DPNGLWYLFDPQDAPN.-LTRLYGL---.......EFEEEYLRLVSEKKYKQS-VTLKSLMFSLINTIIKTGSPYVISKEAMNK-HHWYETQGEAINCSNLCAEIVQQPKQ-------------FTSTCNLANVCLPKCLNSSNFPYTCSNTAQFDFSKLEYAVQAAVFI...........INACILSPSPT--S-SATVGQR........ERSMGIGCHGLADVFSEMGYGYLDLESECLDRDIFETMYYTAVKTSSEICSVGK-GQPFAGFRKSKLAHG-----------------VFHWATWDAMPQrVPMKQWIHLQDNIKK................FGVFNSQFIALMPTAGTSQLTGYTDSFYPYFANMSSKVSNKEEIMKPN--------ITFLKNVKPQDLCTVR---FYGGDVSMMPEDVSTRYKHFLTAFDYCPEAQMRRASIRAPYVDQSQSLTLFLTEEN-..-VQSAKYLKDLLLLGFRLGLKTIMYYCRVKK |
| RIR1_EBV/184-731 | LASCILTTPDLSSEWDVTQALYRHLGRYLFQRAGVGVGVTGAGQDGKHIS--------LLMRMINS--HVEYHNYGC-KRPVSVAAYMEPWHSQIFKFLETKLPEN--.--HERCPGIFTGLFVPELFFKLFRDTP----WSDWYLFDPKDAGD.-LERLYGE---.......EFEREYYRLVTAGKFCGR-VSIKSLMFSIVNCAVKAGSPFILLKEACNAHFWRDLQG-EAMNAANLCAEVLQPSRK-------------SVATCNLANICLPRCLVNAPLAVRAQRADTQGDELLLALPRLSVTLpgegavgdgfsLARLRDATQCATFVVACSILQGsptydsrdMASMGLGVQGLADVFADLGWQYTDPPSRSLNKEIFEHMYFTALCTSSLIGLHTR--KIFPGFKQSKYAGG-----------------WFHWHDWAGTDLsIPREIWSRLSERIVR................DGLFNSQFIALMPTSGCAQVTGCSDAFYPFYANASTKVTNKEEALRPN--------RSFWRHVRLDDREALN---LVGGRVSCLPEALRQRYLRFQTAFDYNQEDLIQMSRDRAPFVDQSQSHSLFLREED-..-AARASTLANLLVRSYELGLKTIMYYCRIEK |
| RIR3_SALTY/174-697 | LVSCFLLRIE--DNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLG-ARQGAGAVYLHAHHPDILRFLDTKRENA--.DEKIRIKTLSLGVVIPDITFRLAKE------NAQMALFSPYDIQR.RYGKPFGDIA-.......-ISERYDELIADPHVRKTYINARDFFQTLAEIQFESGYPYIMFEDTVNR-ANPIAGRIN---MSNLCSEILQVNSASRYDDNLDYTHIGHDISCNLGSLNIAHVMD---------------SPDIGRTVETAIRG...........LTAVSDMSHIRSVPSIAAGNAA........SHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYTITWHAVHTSMRLARERGK--TFAGFAQSRYASGDYFTQYLQDDWQPKTAKVRALFARSGITL.PTREMWLKLRDDVMR................YGIYNQNLQAVPPTGSISYINHATSSIHPIVAKIEIRKEGK-----------------TGRVYYPAPFMTNE----------NLDMYQDAYDI------GPEK--IIDTYAEATRHVDQGLSLTLFFPDT--..--ATTRDINKAQIYAWRKGIKS-LYYIRLRQ |