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Protein and Associated NucleotideDomains with Inferred Trees
(View raw data for PF02809 - UIM)
Ubiquitin interaction motif
(Pfam reference: accession no. PF02809)
(Interpro reference: accession no. IPR003903)


sequences alignment phylogeny
amino acids
(Pfam-A seed alignment)
47 sequences @ 18 aa
(ave. pairwise identity: 0.38)
(view Jalview alignment from Pfam)
New Hampshire format
(total tree length: 19.86)
nucleotides
(available for above)
41 sequences @ 54 bp
(ave. pairwise identity: 0.47)
New Hampshire format
(total tree length: 13.67)
amino acids, restricted set
(corresp. to available nt seqs)
41 sequences @ 18 aa
(ave. pairwise identity: 0.38)
New Hampshire format
(total tree length: 18.14)