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Protein and Associated NucleotideDomains with Inferred Trees
(View raw data for PF02806 - Alpha-amylase_C)
Alpha amylase, C-terminal all-beta domain
(Pfam reference: accession no. PF02806)
(Interpro reference: accession no. IPR006048)


sequences alignment phylogeny
amino acids
(Pfam-A seed alignment)
44 sequences @ 97 aa
(ave. pairwise identity: 0.42)
(view Jalview alignment from Pfam)
New Hampshire format
(total tree length: 16.97)
nucleotides
(available for above)
42 sequences @ 291 bp
(ave. pairwise identity: 0.48)
New Hampshire format
(total tree length: 14.12)
amino acids, restricted set
(corresp. to available nt seqs)
42 sequences @ 97 aa
(ave. pairwise identity: 0.42)
New Hampshire format
(total tree length: 16.59)