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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF02779 phylogeny
for nucleotide alignment


 
(((((((((((((((((((ODBB_BACSU/2-178,((Q9RPS4_ENTFA/2-179,O84344_CHLTR/349-529),(((Q46143_9CLOT/2-180,((Q9Z8N3_CHLPN/7-183,((Q9ZQY3_MAIZE/37-215,(ODPB_SCHPO/36-214,ODPB_YEAST/37-215)),(((ODPB_RHIME/136-314,ODPB_ZYMMO/137-315),((O16144_ASCSU/30-206,ODPB_ASCSU/34-210),P79932_XENLA/12-188)),ODPB_RICPR/1-179))),(O24458_ARATH/84-262,(ODPB_PORPU/2-180,Q9TLS3_CYACA/2-180)))),(ODPB_ACHLA/2-180,(ODPB_MYCPN/5-183,Q49109_MYCCA/2-180))),((ODBB_HUMAN/69-245,Q93619_CAEEL/43-219),Q9SAV3_ARATH/30-206)))),Q9RYC0_DEIRA/22-198),((ACOB_ALCEU/2-189,Q52015_PSEPU/3-190),((ACOB_BACSU/2-192,Q48430_KLEPN/2-194),Q57041_PELCA/3-193))),((ODPB_BACST/2-179,Q9Y8I6_HALVO/4-182),(Q9XA61_STRCO/4-181,(Q9XA48_STRCO/7-184,O06160_MYCTU/24-201)))),Q9YBC3_AERPE/2-178),Q50851_MYXXA/1-172),ODBB_PSEPU/4-180),(Q9RXM3_DEIRA/590-790,((Q50992_NEIGO/232-432,((((Q23629_CAEEL/557-765,Q9VA02_DROME/568-774),ODO1_RICPR/583-779),(((O61199_CAEEL/649-868,(Q9ULD0_HUMAN/637-853,Q9VVC5_DROME/642-858)),(Q9ZRQ2_ARATH/639-855,(O74378_SCHPO/642-855,ODO1_YEAST/644-857))),(Q9Z8G5_CHLPN/567-763,ODO1_BACSU/590-789))),ODO1_COXBU/589-785)),((ODO1_ALCEU/595-795,((O50463_MYCTU/862-1063,P96746_CORGL/911-1109),(P94324_BRAJA/630-826,Q59736_RHOCA/631-827))),(ODO1_ECOLI/589-785,O85487_PSEPU/597-793))))),(O52571_AMYMD/6-172,FAS3_RHOFA/15-177)),(Y4MN_RHISN/34-201,(((((TKT_AQUAE/375-548,(((((TKT_MYCGE/340-511,((TKT2_ECOLI/352-524,TKT_HAEIN/353-527),(TKT_SCHPO/358-536,((TKT1_YEAST/353-532,TKT2_YEAST/354-533),(TKT_PICST/351-530,TKT1_CANAL/351-530))))),(TKT_STRPN/349-522,O84755_CHLTR/355-527)),TKT_BACSU/352-525),TKT_TREPA/353-526),((((TKTC_CRAPL/207-381,Q9SMH7_CYAPA/458-632),P73282_SYNY3/357-533),(Q9RS71_DEIRA/356-529,((TKT_XANFL/355-528,(Q60103_XANFL/374-546,TKTC_ALCEU/359-531)),((TKT_RHOCA/356-529,TKT2_RHIME/356-529),TKT_RHOSH/349-522)))),(TKT_MYCLE/373-557,Q9Z475_CORGL/352-534)))),Q9ZM85_HELPJ/342-510),(DAS_PICAN/364-548,DAS_CANBO/361-545)),(Q9YEJ5_AERPE/8-175,(Q9V1I1_PYRAB/1-167,TKTC_METJA/7-174))),(Q9ZC16_STRCO/303-468,(TKT_HUMAN/313-479,(TKT2_HUMAN/231-397,((O17759_CAEEL/311-477,O96074_ASCSS/318-484),Q9VHN7_DROME/317-483))))))),((O50408_MYCTU/210-376,DXS_MYCLE/312-479),DXS1_STRCO/314-481)),DXS_DEIRA/320-485),((DXS_ARATH/397-563,O81954_CHLRE/402-568),DXS_RHOCA/319-485)),DXS_SYNLE/317-482),DXS_BACSU/314-480),DXS_TREPA/315-479),(((O96694_PLAFA/826-994,DXS_HELPJ/307-473),DXS_THEMA/297-464),DXS_AQUAE/316-481)),DXS_HAEIN/318-483),DXS_CHLPN/323-487,DXS_CHLTR/319-483);
(((((((((((((((((((ODBB_BACSU/2-178:0.17386,((Q9RPS4_ENTFA/2-179:0.30053,O84344_CHLTR/349-529:0.30114):0.08243,(((Q46143_9CLOT/2-180:0.34482,((Q9Z8N3_CHLPN/7-183:0.26057,((Q9ZQY3_MAIZE/37-215:0.21434,(ODPB_SCHPO/36-214:0.15088,ODPB_YEAST/37-215:0.21348):0.07310):0.04640,(((ODPB_RHIME/136-314:0.23252,ODPB_ZYMMO/137-315:0.16638):0.10128,((O16144_ASCSU/30-206:0.22135,ODPB_ASCSU/34-210:0.24090):0.07333,P79932_XENLA/12-188:0.20958):0.07720):0.07766,ODPB_RICPR/1-179:0.20112):0.04425):0.12026):0.07514,(O24458_ARATH/84-262:0.25565,(ODPB_PORPU/2-180:0.14482,Q9TLS3_CYACA/2-180:0.16427):0.05525):0.14850):0.09555):0.11342,(ODPB_ACHLA/2-180:0.26306,(ODPB_MYCPN/5-183:0.32826,Q49109_MYCCA/2-180:0.21179):0.08818):0.07817):0.04731,((ODBB_HUMAN/69-245:0.19751,Q93619_CAEEL/43-219:0.16907):0.07514,Q9SAV3_ARATH/30-206:0.20581):0.22490):0.05761):0.16452):0.23958,Q9RYC0_DEIRA/22-198:0.16854):0.06103,((ACOB_ALCEU/2-189:0.11165,Q52015_PSEPU/3-190:0.17946):0.06024,((ACOB_BACSU/2-192:0.33575,Q48430_KLEPN/2-194:0.24465):0.05738,Q57041_PELCA/3-193:0.23943):0.07125):0.18206):0.05408,((ODPB_BACST/2-179:0.29800,Q9Y8I6_HALVO/4-182:0.16826):0.10166,(Q9XA61_STRCO/4-181:0.17094,(Q9XA48_STRCO/7-184:0.16433,O06160_MYCTU/24-201:0.29805):0.06811):0.05671):0.03752):0.01186,Q9YBC3_AERPE/2-178:0.38332):0.04406,Q50851_MYXXA/1-172:0.38098):0.02221,ODBB_PSEPU/4-180:0.25073):0.15846,(Q9RXM3_DEIRA/590-790:0.14880,((Q50992_NEIGO/232-432:0.20806,((((Q23629_CAEEL/557-765:0.23739,Q9VA02_DROME/568-774:0.26587):0.09851,ODO1_RICPR/583-779:0.33644):0.09361,(((O61199_CAEEL/649-868:0.13420,(Q9ULD0_HUMAN/637-853:0.15606,Q9VVC5_DROME/642-858:0.13872):0.13999):0.13607,(Q9ZRQ2_ARATH/639-855:0.19982,(O74378_SCHPO/642-855:0.22370,ODO1_YEAST/644-857:0.20795):0.12521):0.07342):0.08155,(Q9Z8G5_CHLPN/567-763:0.37248,ODO1_BACSU/590-789:0.30465):0.13650):0.04834):0.09545,ODO1_COXBU/589-785:0.25471):0.10459):0.10968,((ODO1_ALCEU/595-795:0.13868,((O50463_MYCTU/862-1063:0.13482,P96746_CORGL/911-1109:0.21861):0.14535,(P94324_BRAJA/630-826:0.09100,Q59736_RHOCA/631-827:0.18202):0.07641):0.05087):0.02998,(ODO1_ECOLI/589-785:0.19470,O85487_PSEPU/597-793:0.10890):0.06484):0.03608):0.00000):0.60921):0.35797,(O52571_AMYMD/6-172:0.15977,FAS3_RHOFA/15-177:0.41325):0.17683):0.18345,(Y4MN_RHISN/34-201:0.44099,(((((TKT_AQUAE/375-548:0.28655,(((((TKT_MYCGE/340-511:0.45933,((TKT2_ECOLI/352-524:0.30848,TKT_HAEIN/353-527:0.18064):0.16640,(TKT_SCHPO/358-536:0.12575,((TKT1_YEAST/353-532:0.12150,TKT2_YEAST/354-533:0.19539):0.02523,(TKT_PICST/351-530:0.10438,TKT1_CANAL/351-530:0.12992):0.04446):0.12876):0.18366):0.10586):0.06918,(TKT_STRPN/349-522:0.24479,O84755_CHLTR/355-527:0.38845):0.06462):0.09534,TKT_BACSU/352-525:0.18178):0.11089,TKT_TREPA/353-526:0.41247):0.11363,((((TKTC_CRAPL/207-381:0.18540,Q9SMH7_CYAPA/458-632:0.20654):0.05777,P73282_SYNY3/357-533:0.31000):0.13347,(Q9RS71_DEIRA/356-529:0.24356,((TKT_XANFL/355-528:0.12313,(Q60103_XANFL/374-546:0.18864,TKTC_ALCEU/359-531:0.18966):0.09142):0.04948,((TKT_RHOCA/356-529:0.17655,TKT2_RHIME/356-529:0.20713):0.05976,TKT_RHOSH/349-522:0.12433):0.09329):0.12263):0.05515):0.04399,(TKT_MYCLE/373-557:0.29817,Q9Z475_CORGL/352-534:0.18144):0.11136):0.06651):0.08036):0.09107,Q9ZM85_HELPJ/342-510:0.51125):0.07955,(DAS_PICAN/364-548:0.14936,DAS_CANBO/361-545:0.40736):0.30603):0.34491,(Q9YEJ5_AERPE/8-175:0.38742,(Q9V1I1_PYRAB/1-167:0.24282,TKTC_METJA/7-174:0.48766):0.13166):0.23281):0.06144,(Q9ZC16_STRCO/303-468:0.20628,(TKT_HUMAN/313-479:0.11594,(TKT2_HUMAN/231-397:0.18317,((O17759_CAEEL/311-477:0.24963,O96074_ASCSS/318-484:0.28934):0.08204,Q9VHN7_DROME/317-483:0.22048):0.08093):0.08305):0.22147):0.17547):0.06891):0.06743):0.14313,((O50408_MYCTU/210-376:0.31162,DXS_MYCLE/312-479:0.24096):0.10449,DXS1_STRCO/314-481:0.18013):0.20692):0.05803,DXS_DEIRA/320-485:0.28178):0.06101,((DXS_ARATH/397-563:0.38048,O81954_CHLRE/402-568:0.11836):0.12416,DXS_RHOCA/319-485:0.23871):0.10302):0.09268,DXS_SYNLE/317-482:0.25277):0.07662,DXS_BACSU/314-480:0.32938):0.06531,DXS_TREPA/315-479:0.40198):0.07482,(((O96694_PLAFA/826-994:0.49677,DXS_HELPJ/307-473:0.29250):0.10241,DXS_THEMA/297-464:0.31448):0.08490,DXS_AQUAE/316-481:0.32448):0.06639):0.11310,DXS_HAEIN/318-483:0.20563):0.30334,DXS_CHLPN/323-487:0.16439,DXS_CHLTR/319-483:0.24194);