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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF02753 alignment
(19 sequences with 107 aa)


ECPD_ECOLI/156-244 SEAPLALKWFWSGSEgkaSLRVTNPTPYYVSFSSGDLEAS-..--GKRYP.....IDVKMIAPFSDEVMKVNGLNGKAN.-SAKVHFYAIND......FGGAIEGNA
YRAI_ECOLI/149-227 NDAWKSLEFKRSDHS...-LNIYNPTEYYVVFAGLAVDKT-..-DLTSKI.....---EYIAPGEHKQLPLPASGG---.--KNVKWAAIND......YGGSSGTET
FIMB_BORPE/159-240 LTAAADLTFKRKPNG...VLEVHNPTPYYVNLQKLEVGENG..AHGSKTP.....---WMLAPLSSDELRLKGTGA---.--KSVQYWAIDD......FGGVTPYQA
FIMC_SALTY/150-226 EDAPTLLKFSRVGNH...-LKITNPSAYYLTLVNISVGAK-..-KIDNVM.....----IAPKS-DMQIPLP---TGAQ.--GNVTFQSVND......YGALTSATT
FIMC_ECOLI/161-237 DQAAEKLRFRRSANS...-LTLINPTPYYLTVTELNAGTR-..-VLENAL.....----VPPMG-ESTVKLP---SDAG.--SNITYRTIND......YGALTPKMT
PSAB_YERPS/178-269 TDSADSLTWRYKGNY...-LEVNNPTPFYMNFYSLRIGDEK..INLSDLGskdeiKNGSYVPPFSSRDFIIPVKNKGKA.--TEVFWQVIND......NGGVSREFK
MYFB_YEREN/179-264 EEMAGKLIWHRNGQQ...-LQVNNPTPFYMNFKSVSLGNKN..IKLSSAG.....-NENYVAPFAERSFSLPVDMAERP.--AEINWQIIND......LGSESQVFK
AGGD_ECOLI/170-247 DDVAGKIKWQKVGNK...-LKGVNPTPFYMDIAELRVGEK-..-EITETH.....----YIAPFSSYEYPMPVNGG---.--GDVRWKVVTD......YGGISKTFE
CAF1M_YERPE/175-253 IQFAENLSWKVDGGK...-LIAENPSPFYMNIGELTFGGK-..---SIPS.....---HYIPPKSTWAFDLPKGLAGA-.--RNVSWRIIND......QGGLDRLYS
LPFB_SALTY/148-228 MDGWNKLQFTSAGAN...QIKVENPSAFNLTFNKFYANGR-..-DIEKTG.....----MVPAKGSLNIELPAGTG---.KVSEVKYNIIND......FGTAGDMLT
YEHC_ECOLI/161-239 KATFKKLLVNRSGNG...-LVIKNDSANWVTISDVKANN--..VKVNYET.....---IMIAPLESQSVNVKSNNAN--.---NWHLTIIDD......HGNYISDKI
SEFB_SALEN/170-246 MEIADKLKLERKGNS...-IVIKNPTSSYVNIANIKSGN--..LSFNIPN.....---GYIEPFGYAQLPGGVH-----.--SKITLTILDD......NGAEIIRDY
MRKB_KLEPN/149-230 DAAAEKLALSANGSS...-LSVSNPTPFYITVSRISRNGGK..-ALNSKT.....---VMFAPQSSQTIALSSAVSKG-.--ETLTVNNIND......YGADVAVKV
FANE_ECOLI/141-224 DEAENNIKLINSGTD...-SCLENTTPYYFAISDVKINGKS..IDLNSDA....kNKMGVFSPFSKVCLGNVNTSG---.---NITVTAFND......YGVATSYTV
CS31_ECOLI/159-238 INSEGQIEWGIRDGN...-LVAKNKTPYYFTIVNASFNGK-..-ALKTPG.....----TLGPYEQKLYTLPSKISVS-.--GLVKWEIIGD......LGESSETKK
HIFB1_HAEIN/160-238 FDAMKKVVFKATPKG...-VLVDNQTPYYMNYIGLLHQN--..----KPA.....KNVKMVAPFSQAVFEAKGVRS---.--GDKLKWVLVN.....dYGADQEGDA
CLPE_ECOLI/155-253 KGAEEGISLQSRPDG...RTMLVNTTPYIFAIGSLLDGNGKriATDNETA.....QKLLMFMPGDEVQVKGNVVKVDSLnDYGELQTWTINQkktptsSGQKASDSL
YHCA_ECOLI/139-220 RETWKFLEWRKNGDQ...-IEISNPSNYVVRMTLQFKTLPS..GKTGAIN.....--KTYFLPHTSTTTALTNATD---.--TKVEFYPASR......YGYRGNKYV
PAPD_ECOLI/146-234 NEVWQDQLILNKVSG...GYRIENPTPYYVTVIGLGGSE--..KQAEEGE.....FETVMLSPRSEQTVKSANYNTPYLsYINDYGGRPVLS......FICNGSRCS