EMBL-EBI > Goldman Group

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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF02753 alignment
(19 sequences with 321 bp)


ECPD_ECOLI/156-244 TCTGAAGCCCCGTTAGCCCTGAAGTGGTTCTGGTCAGGTTCAGAAggtaaggcgTCATTACGAGTGACCAATCCAACCCCTTACTACGTCTCTTTTAGCAGTGGTGATTTAGAAGCTAGC---......------GGTAAACGCTATCCG...............ATTGATGTGAAAATGATTGCACCATTTAGTGATGAGGTCATGAAAGTCAATGGCCTTAATGGCAAAGCGAAT...---TCTGCAAAAGTGCATTTTTACGCCATTAATGAC..................TTTGGTGGCGCAATTGAAGGTAATGCC
YRAI_ECOLI/149-227 AACGATGCGTGGAAATCACTGGAATTTAAACGTAGTGACCATTCA.........---CTCAATATATATAACCCAACTGAATATTACGTCGTATTTGCCGGACTGGCAGTCGATAAAACC---......---GATCTCACAAGCAAAATT...............---------GAATATATCGCGCCCGGAGAACATAAACAGTTACCACTTCCTGCATCTGGCGGA---------...------AAGAACGTGAAATGGGCTGCGATCAATGAT..................TATGGCGGCAGTTCCGGGACAGAAACT
FIMB_BORPE/159-240 CTGACGGCCGCCGCCGACCTGACCTTCAAGCGCAAGCCCAACGGC.........GTGCTGGAGGTGCACAACCCGACGCCGTACTACGTGAACCTGCAAAAGCTGGAGGTGGGCGAGAACGGC......GCGCACGGCAGCAAGACGCCG...............---------TGGATGCTGGCGCCGCTTTCCTCGGACGAGCTGCGCCTGAAAGGGACGGGGGCC---------...------AAGTCGGTGCAGTACTGGGCCATCGACGAC..................TTCGGCGGCGTGACGCCATATCAGGCG
FIMC_SALTY/150-226 GAAGACGCGCCGACCTTGCTGAAATTTTCCCGTGTCGGCAACCAT.........---CTCAAGATAACCAACCCATCTGCTTATTACCTCACGCTGGTCAATATCAGCGTGGGCGCGAAA---......---AAGATTGATAACGTGATG...............------------ATCGCGCCAAAAAGC---GACATGCAAATTCCCTTACCG---------ACTGGCGCGCAG...------GGCAACGTGACATTTCAGTCCGTCAATGAT..................TACGGCGCATTGACGTCGGCGACAACG
FIMC_ECOLI/161-237 GATCAGGCCGCAGAAAAATTAAGATTTCGTCGTAGCGCGAATTCT.........---CTGACGCTGATTAACCCGACACCCTATTACCTGACGGTAACAGAGTTGAATGCCGGAACCCGG---......---GTTCTTGAAAATGCATTG...............------------GTGCCTCCAATGGGC---GAAAGCACGGTTAAATTGCCT---------TCTGATGCAGGA...------AGCAATATTACTTACCGAACAATAAATGAT..................TATGGCGCACTTACCCCCAAAATGACG
PSAB_YERPS/178-269 ACGGATAGTGCGGATTCATTAACTTGGAGATATAAAGGTAACTAC.........---TTGGAAGTTAATAATCCAACGCCATTCTACATGAATTTTTATTCACTCCGTATTGGTGATGAAAAA......ATAAATTTATCTGATTTAGGTtcaaaggatgaaataAAAAATGGCAGCTATGTTCCGCCATTCTCTTCTAGGGATTTTATTATTCCGGTAAAAAATAAAGGTAAGGCA...------ACAGAGGTTTTTTGGCAAGTGATTAATGAT..................AATGGTGGTGTGAGCCGGGAATTTAAA
MYFB_YEREN/179-264 GAAGAGATGGCAGGAAAATTAATCTGGCACCGTAATGGACAACAG.........---TTGCAGGTTAATAATCCCACTCCATTTTATATGAATTTTAAATCTGTAAGTTTGGGCAACAAAAAT......ATCAAGTTATCTTCTGCCGGA...............---AATGAAAATTATGTCGCGCCTTTCGCGGAAAGAAGTTTTTCATTACCGGTTGATATGGCAGAGCGTCCC...------GCAGAAATCAATTGGCAAATCATTAATGAT..................TTGGGGAGCGAGAGTCAGGTATTTAAA
AGGD_ECOLI/170-247 GATGATGTAGCAGGAAAAATCAAGTGGCAAAAAGTCGGAAATAAA.........---TTAAAAGGAGTAAACCCAACGCCATTCTATATGGACATTGCTGAGTTGAGAGTAGGTGAAAAA---......---GAAATAACTGAAACCCAT...............------------TATATAGCTCCTTTTTCTTCTTACGAATATCCGATGCCTGTAAATGGGGGG---------...------GGGGACGTCCGATGGAAAGTGGTAACTGAT..................TACGGTGGTATTAGTAAAACATTTGAA
CAF1M_YERPE/175-253 ATACAGTTTGCTGAAAACTTAAGCTGGAAAGTTGATGGGGGGAAG.........---CTAATTGCTGAAAACCCCTCACCTTTCTACATGAACATAGGTGAATTAACATTTGGAGGGAAA---......---------AGTATTCCTTCT...............---------CACTATATTCCACCTAAATCGACGTGGGCTTTTGATTTGCCAAAAGGACTAGCGGGAGCA---...------CGTAATGTTTCGTGGAGAATAATTAATGAT..................CAGGGAGGGTTGGATCGTTTGTATTCC
LPFB_SALTY/148-228 ATGGACGGCTGGAACAAACTGCAGTTCACCAGCGCAGGGGCTAAC.........CAGATCAAAGTGGAAAACCCATCTGCCTTTAACCTGACGTTTAATAAATTTTATGCCAACGGCCGT---......---GATATTGAAAAAACGGGA...............------------ATGGTTCCGGCAAAAGGCTCATTGAATATTGAACTGCCAGCCGGCACCGGC---------...AAGGTAAGCGAAGTTAAATACAACATTATTAATGAC..................TTTGGCACTGCTGGCGACATGTTGACA
YEHC_ECOLI/161-239 AAAGCGACATTTAAAAAATTGCTGGTAAATCGCAGTGGCAATGGT.........---TTGGTGATAAAAAATGACTCAGCTAATTGGGTGACGATTTCGGATGTCAAAGCTAATAAT------......GTCAAAGTCAATTATGAAACT...............---------ATTATGATTGCCCCCTTAGAAAGTCAGAGTGTTAATGTCAAAAGTAATAATGCAAAT------...---------AACTGGCATCTGACCATTATCGATGAC..................CATGGCAACTATATTAGTGACAAAATT
SEFB_SALEN/170-246 ATGGAGATTGCAGATAAATTAAAGTTAGAGAGAAAAGGAAATAGT.........---ATAGTTATAAAGAATCCAACATCATCATATGTGAATATTGCAAATATTAAATCTGGTAAT------......TTAAGTTTTAATATTCCAAAT...............---------GGATATATTGAGCCATTTGGATATGCTCAATTACCTGGTGGAGTACAT---------------...------AGTAAAATAACTTTGACTATTTTGGATGAT..................AACGGCGCTGAAATTATAAGAGATTAT
MRKB_KLEPN/149-230 GACGCTGCGGCAGAAAAACTGGCGCTCTCCGCTAACGGCAGCAGC.........---CTGTCCGTCAGTAACCCAACGCCCTTTTATATCACCGTAAGCCGTATCTCCCGTAACGGCGGCAAA......---GCGCTCAACAGCAAAACG...............---------GTCATGTTTGCCCCGCAGTCCAGCCAGACCATCGCCCTCTCTTCAGCGGTGAGCAAAGGC---...------GAGACCCTGACCGTTAACAACATTAATGAT..................TATGGTGCAGATGTCGCAGTGAAAGTT
FANE_ECOLI/141-224 GATGAGGCAGAAAATAATATTAAGCTGATTAACTCGGGCACGGAT.........---TCTTGCCTTGAAAATACAACGCCATATTACTTTGCAATTAGTGATGTTAAAATTAATGGCAAATCA......ATTGATTTAAATTCTGATGCA............aaaAATAAGATGGGAGTATTCTCCCCATTCTCGAAAGTTTGTCTGGGAAATGTAAATACTAGTGGA---------...---------AACATCACGGTAACAGCATTTAATGAC..................TATGGCGTTGCAACCAGCTACACTGTT
CS31_ECOLI/159-238 ATTAATTCCGAAGGGCAGATAGAATGGGGGATAAGGGATGGTAAT.........---TTAGTAGCAAAGAATAAAACACCTTACTATTTTACTATAGTAAATGCATCGTTTAATGGAAAG---......---GCACTCAAAACACCGGGG...............------------ACGCTAGGGCCGTATGAGCAAAAACTTTACACGCTACCTAGTAAAATTTCTGTATCT---...------GGACTGGTAAAGTGGGAAATTATTGGTGAT..................CTAGGTGAGAGCAGTGAAACAAAGAAA
HIFB1_HAEIN/160-238 TTCGATGCGATGAAAAAAGTGGTGTTTAAAGCCACGCCTAAAGGT.........---GTGCTGGTAGATAATCAAACACCTTATTATATGAACTATATTGGTTTGTTACATCAAAAT------......------------AAACCTGCG...............AAAAATGTCAAAATGGTTGCGCCTTTTTCTCAAGCGGTATTTGAAGCCAAAGGCGTGCGTTCT---------...------GGCGATAAATTGAAATGGGTATTGGTTAAT...............gatTACGGTGCCGACCAAGAGGGCGATGCC
CLPE_ECOLI/155-253 AAAGGGGCAGAAGAAGGCATCAGCCTGCAGAGCCGCCCGGATGGC.........AGGACCATGCTGGTGAACACCACGCCGTACATTTTTGCGATTGGCAGCCTGCTGGACGGAAACGGGAAGagaattGCCACGGATAACGAGACAGCA...............CAGAAACTGCTGATGTTCATGCCGGGGGATGAAGTACAGGTGAAGGGAAATGTGGTGAAAGTGGATTCTCTGaatGATTACGGTGAACTGCAGACCTGGACGATTAATCAGaaaaaaacgccaacgtctTCCGGGCAGAAGGCATCTGATTCGCTG
YHCA_ECOLI/139-220 CGAGAGACCTGGAAATTCCTGGAATGGCGTAAAAATGGCGACCAA.........---ATTGAGATTAGCAACCCCAGTAATTATGTCGTTCGTATGACCTTACAATTTAAAACGCTCCCTTCA......GGAAAAACGGGGGCTATAAAT...............------AAGACCTATTTTCTACCACACACCAGTACAACTACTGCATTAACAAACGCTACGGAT---------...------ACAAAAGTCGAGTTTTACCCAGCCAGCCGA..................TATGGTTATCGCGGTAATAAATATGTC
PAPD_ECOLI/146-234 AATGAAGTATGGCAGGACCAGTTAATTCTGAACAAAGTCAGCGGT.........GGGTATCGTATTGAAAACCCAACGCCCTATTATGTCACTGTTATTGGTCTGGGAGGAAGTGAA------......AAGCAGGCAGAGGAAGGTGAG...............TTTGAAACCGTGATGCTGTCTCCCCGTTCAGAGCAGACAGTAAAATCGGCAAATTATAATACCCCTTATCTGtctTATATTAATGACTATGGTGGTCGCCCGGTACTGTCG..................TTTATCTGTAATGGTAGCCGTTGCTCT