EMBL-EBI > Goldman Group

PANDIT Home | Browse PANDIT | Help on PANDIT | Release notes | Pfam



PANDIT Homepage
pan•dit
PANDIT
Protein and Associated NucleotideDomains with Inferred Trees
(View raw data for PF02737 - 3HCDH_N)
3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
(Pfam reference: accession no. PF02737)
(Interpro reference: accession no. IPR006176)


sequences alignment phylogeny
amino acids
(Pfam-A seed alignment)
77 sequences @ 213 aa
(ave. pairwise identity: 0.33)
(view Jalview alignment from Pfam)
New Hampshire format
(total tree length: 51.31)
nucleotides
(available for above)
77 sequences @ 639 bp
(ave. pairwise identity: 0.45)
New Hampshire format
(total tree length: 34.66)
amino acids, restricted set
(corresp. to available nt seqs)
77 sequences @ 213 aa
(ave. pairwise identity: 0.33)
New Hampshire format
(total tree length: 51.31)