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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF02646 alignment
(22 sequences with 332 aa)


RMUC_CHLPN/93-384 SKSFQSILSPIQTTLT-TFKQSLETFETKHAEDRGRLKEQISQLLAVE---KKLEHETHVLTDILK--HPGSRGRWGEIQLERILELAGMLKYCDYDSQTT-...---SAQGAFRADIIIRLPQDR-...----CLIIDAKAPISD--SYFSVEEIDK--------GDLVDKIKEHIKTLKSKSYWEKF......---HQSPEYVILFLPGESLFNDAIRLAPELMEIGASSNVILSSPLTLLALLKTIAYMWKQENLQKQIQEVSLLGKELHRRLQVVFTHFQKIGKNLNQTVQSYNDMTSSFQYRVLPTLRKFEGLETSSSHQIEEPTPI
RMUC_CHLTR/100-392 TQAITSVLAPVHNTLS-AFKQNLENFETKQAEDRGALKEQLSQLLTAE---QKLERETQALTNILK--HPGSRGRWGEIQLERILEISGMLKYCDYSTQTV-...--DSSESSSRADIVIRLPQNR-...----SLVIDAKTPFSE-EYLTDNHADPT---------DLVKKIKDHIKTLKTKSYWDKF......---EQSPEFVILFLPGESLFNDAIRCAPELMDYAGQSNVILSSPVTLMALLKTVTHVWKQENLQNQIREIGQLGKDLYQRMHKLFDHFHKVGKHLGQAVHSYNDMSSSLSARVLPILRTFDKLELSSSHNKIEALSQ
RMUC_ZYMMO/136-437 EAKLELLLQPVKDSLKR-YEASVKEAEQLRQTEYGSLTALVSTMREGQ---EAVKNEANKLVNALR-TAPKARGCWGEQPLRNVLESCGLSEYVDFETEVSV...--NSEKGRLRPDAIIRIPNGS-...----ILVVDSKVSLNAYQDAYDAVDEDKR---QLYLQAHSKAIKAHIDGLSQKNYWDQF......---KEAPDYVIMFIPGEHFLSAALEQDHNLWEYAFQKRVLLATPTNLIAIARTVAAVWRQEDIAHNARKIGELGKELYERIAKVDAHMRALGNSLENSVKNYNKFVGSFESRVLVTARKFRELNIETKEQEIKEAPI
Q9ABF6_CAUCR/98-401 EARLEAQLKPVAETLA-KFEAQVTAVEKARAEETGGLKAQITALLEAS---TATQAEARKLSAALRR-GAGVQGRWGEQTLRNVLEAAGLNSRFDFQEQFSV...--DSEEGRRRPDVKVTLPGGG-...----VFVIDAKCSLNAFLEAQDATDEVLR---EAAMARHAQSVRTHMQGLSSKAYWDQF......-AGEGSPDFVAMFVPGDGFLAAALDRLPELMAEAMDRRVVLVTPTTLFALCKAVAYGWRAEDQAKNAARIVEVGRELYKRVSVMGAHAGAMGKALESAVGKYNQFVGSLESQVLTQARRFEDLSVDHEGKEIPEPPM
RMUC_VIBCH/183-486 RQSLEGLLTPLKEQLE-GFKKQVNDSFNHEAKERHTLVHELRNLQRLN---EQMAKEAVNLTQALKG-DNKQQGNWGEVVLARVLAESGLREGHEYQTQVSL...-QNEAGKRYQPDVIVHLPQNK-...----QVVIDSKMALVAYERYFHAETDSER---DSALREHLLALRNHIRGLGQKDYHQ--......LKGIQSLDYVLMFIPVEPAFQVAIQADPSLVNDAMEQNIILVSPTTLLVALRTIDNLWRNERQNQNAQLIAERASKLYDKLRLFVEDMEGLGGALDKANQSYQGAMNKLVTGRGNAIRQAESFKQLGVEIKRSIPQP
RMUC_YERPE/146-449 KQSLDRLLLPLREQLD-GFRRQVQDSFGQEARERHTLTHEIRNLQQLN---AQMAREALNLTKALKG-DNKTQGNWGEVVLAKVLEASGLREGHEYQTQVSV...-KIDQTSRMQPDVIVRLPQGK-...----DVVIDAKMSLVAYERYFNSEDDAER---EVALNEHLSSLRGHIRMLGRKDYQQ--......LPGLRSLDYVLMFIPVEPAFLVAIDRQPELINEALQHNIMLVSPTTLLVALRTITNLWRYEHQSQNAQRIAERAARLYDKVRLFVDDMASLGQSLDKAQLSYHQAMNKLSQGRGNLVGQVESFRTLGVEVKRPISPL
RMUC_ECOLI/135-438 RQSLNSLLSPLREQLD-GFRRQVQDSFGKEAQERHTLTHEIRNLQQLN---AQMAQEAINLTRALKG-DNKTQGNWGEVVLTRVLEASGLREGYEYETQVSI...-ENDARSRMQPDVIVRLPQGK-...----DVVIDAKMTLVAYERYFNAEDDYTR---ESALQEHIASVRNHIRLLGRKDYQQ--......LPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINPD
RMUC_NEIMA/262-570 REQLHQVLNPLNERIQ-GFGELVKQTYDKESRERLTLENELKRLQGLN---AQLHSEAKALTNALTGTQNKVQGNWGEMILETVLENSGLQKGREYVVQAASvrkEEDGGTRRLQPDVLVNLPDNK-...----QIVIDSKVSLTAYVRYTQAADADTA---ARELAAHVASIRAHMKGLSLKDYTD--......LEGVNTLDFVFMFIPVEPAYLLALQNDAGLFQECFDKRIMLVGPSTLLATLRTVANIWRNEQQNQNALAIADEGGKLYDKFVGFVQTLESVGKGIDQAQNSFQTAFKQLAEGRGNLVGRAEKLRLLGVKANKQLARD
RMUC_PSEAE/135-437 QQRLGQMLDPLKERIQ-AFEKRVEESYQQEARERFSLSKELERLQQLN---LRLGEEATNLTRALK--GQKTQGNWGELVLERVLEHAGLEKGREYETQVSL...-KGAEGERFQPDVLIRLPGDK-...----QVVVDAKVSLTAYQQYIAADDDLLR---QQALKQHVTSLRNHVKGLSGKDYRR--......LEGLHSLDFVLLFMPIEAAFSTALQAEPNLFQDAFAQNIVIVSPTTLLATLRVIDSLWRQERQNQNAREIAERAGSLYDKFVLFVQDLDEVGSRLQQLDKAYAAARNKLTEGRGNLISRSEQLKLLGARASKSLPTD
Q8KDA5_CHLTE/116-419 RQRLDGLLEPFRLQLDS-FRQRIDEVHRSDTELSARLLEQVRQLQELN---HQVSDEANNLARAIKG-ESKKQGDWGELIIERLFEASGLVKGREYTVQES-...DRTDDGRLVRPDFMVHLPGEK-...----AVIVDAKVSLTAYERWCNEEHEARR---SEALREHVQSVRRHVAELERKDYAA--......LRGNRTLDFVIMCIPLEPAYQAAMQADPSLFYELAGKNVVVTGPATLMITLRLIAQIWRRENENRNAELIADKAGRIYDQVVLVAEAMIEARKKLAGVSDTFELAMKRLTEGRGNLAGRAEEIRKLGAKVSKKLPPE
RMUC_RICCN/105-406 SKQLIEIHKMENTAARELAEKNIATASGKFNSEFERL---ITMVGALNKDIEQSKGTVDLIKQSLL--SPIGAGLLAEITLENILKSSGLRPNLDFIMQYGL...-TTLDSGKLRPDALIFLPSGN-...----LMVIDSKAS--KF--LVDKQDNN---------MSLNKTMNYHLKSLANKEYAANIltnlnkKDQSFNNVMTLMFLPTEQAVEKVIAADPEFLQKAWGCNIFPVGPSGLMNMLSFAKFQITDHRRSENYKVIIEEVRKLLSSIGTMADYSQKIGNNLHNMVTNYDKFAASFNRNFMSRVKNIQKLGIDSGNKAMPATLE
Q8UID2_AGRT5/99-389 NQRLDGMSQRLGETLT----EQTRSTHENLSR----LQERLAVIDAAQGNIQDLAKDVVGLQAILS--NKQTRGAFGQARMETLIADA-LPAG-AFQLQPTL...-----SNGYRPDCIIKMPNNAP...----ALVIDAKFPLEAWNAIKADETPETK---RAAVQQFRRDMEVHIRDVAEK-Y----......LIRGETQDTAFIFVPSESIFADIHQHFEYLVQRAHRARVVIVSPSLLMLSVQVIQSVLKDQRMREQAHLIQGEVALLMDDVRRLDDRTRKLQAHFGLAQKDVDMMLISSDKVLARGQKIEGLDFSPTEKEASHGEIE
Q8YDB5_BRUME/34-324 RERLDGMTHRIGQTMT----EQTRSTHENLAK----LQERLAVIDTAQNNIQSLAGQVVQLQAILA--NKQTRGAFGQSRMEAIIAD-GLPQG-AYEFQATL...-----SNSTRPDCLVRMPNNAP...----SLVIDAKFPLEAWNAMRETEQPEAR---KAAVAQFRRDMEIHIKDVSDK-Y----......LIPGETQDTAFLFVPSESIFADIHEHFEALIQRAHRARVVVVSPSLLMLSIQVIQAILKDARMREQAHVIQGEVIRLMEDVGRLDERVRKLQTHFIQANKDIDDILVSSSKVTKRGAKIEALEFGPPPAEEPSRPQA
Q98D51_RHILO/113-403 GQRLDAMTGRIGQTMT----EQTKSTHESLAK----LQERLAIIDTAQGNIQSLAGQVVQLQAILS--NKQTRGAFGQSRMEAIVAD-GLPHG-AYEFQATL...-----SNGSRPDCLVKMPNGAP...----SLAIDAKFPLEAWNAIRAADGADLQ---KVASQAFRRDIEIHVRDISEK-Y----......LIQGETQDTAFMFVPSESVFAEIHENFEAIVHKAHRARVVIVSPSLLMLSIQVIQAILKDARMREQAHLIQGEVIRLMEDVARVDERVRKLQVHFGQSAKDIDDILVSTSKVTKRGQKIEALEFGAQADGDAGSETP
Q92SH7_RHIME/89-379 SQRIDGMTHRIGASIS----EQTKATHEN----LRRLQERLAVIDNAQNNIQSLAKDMAGLQSILA--NKQTRGAFGQSRMEAIVAD-GLPMG-AFAFQATL...-----SNGARPDCTIRMPNGQP...----PLVIDAKFPLEAWNSMRDAASAERR---QQAAQAFRRDMEVHIRDIAGK-Y----......LLPGETQDTAFLFVPSESIFAEIHEHFEAVVQKAHRQRIVIVSPSLLLLSIQVIQAILKDARMREQAHLIQSEVVRLMEDLSRLDERVRKLQGHFAMTQKDVEDILISSDKLTRRGAKIEALELQAEADPRQGEKPG
RMUC_XYLFA/143-444 AQQLEQIRAIVDEKLQTTLNTRLDSSFKLVSERLEQVQRGL-------GEMQQLATGVGDLKRVLT--HVKSRGTWGEVQLDNILDQTLTQE--QYARGVRV...---CPDASEIVDFAVRLPGRGQ..yEAPVWLPIDVKCPKEDYERLLDAQEQADQELVRTMGVQLERAIKIQAKSIRDK-Y----......IVPPHTTDFAVMFLPTEGLYAETIRRPGLADVLQREYRVVVAGPTTVTALLNSLQMGFRTLAIEQRSSEVWSLLGAVKSEFGKFAGILEKAEKQINTVGKSLGEAGRKTRTIERRLRGVESLSQEQTQVLLDGLDVD
Q8P363_XANCP/191-491 ASKLELMRATVDEKLQTTLNTRLDASFKLVSERLEQVQRGL-------GEMQQLATGVGDLKRVLT--NVKDRGGWGEVQLENILEQTLTME--QYARSVRV...---KPDSAEAVDFAIRLPGRGD...DTVVWLPVDAKFPREDYERLIDAQEKGDLDAIKSSTAQLERAIRIQAKSISDK-Y----......VCPPHTTDFAVMFLPTEGLYAEVIRRAGLVDLLQREHRVVLAGPTTFTALLNSLQMGFRTLAIEKRSSEVWQVLGAVKSEFGKFAGILEKAERQITTVGKSLGEASRKTRTIERRLRGVETLAGEQSQALLDDAGND
Q8Y0K8_RALSO/145-448 ATKLDEMRRTVDEKLHATLEQRLGESFKLVSDRLEQVHRGL-------GEMQALAQGVGDLKKVLT--NVKTRGTWGEVQLEMLLEQMLTPE--QYDKNVET...---VRGTGARVEFAIRLPGKTDadrEATVWLPIDAKFPKEQYERLLDAQERADAEGAAVASRELEAAVRKEAQTIHEK-Y----......IAPPATTDFAILFLPTEGLYAEVLRRPGLTDELQRKFRVTVAGPTTLTAILNSLQMGFRTLALEKRSSEVWQVLGAVKSEFGKFGDVLAATKKTLERAVSNIEQAEVRTRQMNRKLKAVEALPSDSAQTLLGLETAP
Q9CEC0_LACLA/136-434 DKRLSQIQETVDEKLQETLNRRISQSFEQVTLHLKNVEEGL-------GEMRNLASDVDSLQKVMT--GVKTRGIVGEIQLGRILEQ--MFTSSQYREQVNI...-----QGGNAVDYALILPGKSD...DSELLLPIDSKFPMEDYQRLQMALESNDSLEIDKTRKALFNAVKAQAKSISEK-Y----......IVPPKTTDFAIMFLPTEGLFMEVVNNPELYEQISRDYKVNVTGPTTMTAVLNSLQMGFKTLQIEQKSAEVYELLGAVKTEFGKFEGSLKKVQERLQQSEKEISNLITTRTNVMNRKLRNINEIDNSKSSELLGIDNE
Q8K8N2_STRP3/116-416 EKRLEEMRQIVEEKLEETLKNRLHASFDSVSKQLESVNKGL-------GEMRSVAQDVGTLNKVLS--NTKTRGILGELQLGQIIEDI--MTSSQYEREFVT...---VSGSSERVEYAIKLPGNGQ...GGYIYLPIDSKFPLEDYYRLEDAYEVGDKLAIEASRKALLAAIKRFAKDIHKK-Y----......LNPPETTNFGVMFLPTEGLYSEVVRNAAFFDSLRREENIVVAGPSTLSALLNSLSVGFKTLNIQKNADDISKILGNVKLEFDKFGGLLAKAQKQMNTANNTLDQLISTRTNAIVRALNTVETYQDQATKSLLNMPLL
Q97NN9_STRPN/112-412 EQRLEQMRQTVEEKLEKTLQTRLQASFETVSKQLESVNRGL-------GEMQTVARDVGALNKVLS--GTKTRGILGELQLGQIIEDI--MTPAQYEREYAT...---VENSSERVEYAIKLPGQGD...QEYVYLPIDSKFPLADYYRLEEAYETGDKDEIERCRKSLLASVKRFARDIRNK-Y----......IAPPRTTNFGVLFVPTEGLYSEIVRNPVFFDDLRREEQIIVAGPSTLSALLNSLSVGFKTLNIQKSADHISKTLASVKTEFGKFGGILVKAQKHLQHASGNIDELLNRRTIAIERTLRHIELSEGEPALDLLHFQEN
Q98QA2_MYCPU/145-436 IKQIDLIKGTLDDELSKKLVQKIETSFEQAITTVQKLTENV-------NIIGALNKNILDMKAIFD--NNKKFGTLGETLLEQILENYLPNANLVYSKQYKI...-----KGETRVDFAIKV-LNQR...GNEVLLPIDSKFPATVFREYNENPSVEN-------LKKLENSITERFKE--TKKY----......VVEDKTTTHAFLFFPSEAMYYFFITSPFRQKIMDKYKEVLPVSPSNVILYINHFNLFAKTHLIEKHLKEVKELFVSILKHHQSIQTKYENSKKQQKKSLESLEELGNEVKTINNQISDKANKIGFASEALKLESNSD