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pan•dit 		PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF02637 phylogeny
for nucleotide alignment


 
((((((((((GATB2_CLOAB/329-476,(GATB_CLOTE/326-473,GATB1_CLOAB/326-473)),((((GATB_STRMU/327-474,GATB_STRR6/327-474),((Q71YR4_LISMF/326-473,Q73EK7_BACC1/325-472),((GATB_LACJO/326-473,GATB_LACPL/325-471),GATB_ENTFA/326-473))),GATB_OCEIH/326-473),GATB_STASP/325-472)),GATB_THETN/326-473),((GATB_AERPE/333-478,Q6MDF6_PARUW/341-490),((GATB_CHLTR/336-485,GATB_CHLCV/336-485),GATB_CHLPN/336-485))),(((GATB_WOLPM/326-472,((Q6SGF1_9BACT/328-475,((GATB_COXBU/328-477,(((GATB_GEOSL/330-477,(((((GATB_RHOPA/346-492,GATB_BRAJA/344-490),GATB_AGRT5/351-496),GATB_CAUCR/350-495),(((((SYQ_DEIRA/710-851,Q72H75_THET2/319-466),GATB_HALN1/346-492),(((GATB_TROW8/356-501,GATB_CORDI/353-500),GATB_BIFLO/350-497),(GATB_MYCLE/359-506,GATB_STRAW/353-500))),(GATB_GLOVI/343-490,Q72AV5_DESVH/328-475)),(GATB_RHOBA/349-494,GATB_CHLTE/326-473))),(((GATB_PSESM/328-479,GATB_NITEU/327-476),GATB_NEIMA/327-475),((GATB_BORPE/332-483,GATB_RALSO/333-485),GATB_CHRVO/327-474)))),GATB_BDEBA/328-476),(((GATB_SYNEL/349-496,GATB_ANASP/345-489),(GATB_PROMM/346-493,(GATB_PROMP/341-488,GATB_PROMA/342-489))),Q9FV81_ARATH/399-546))),GATB_MORCA/339-488)),((GATB_HELHP/328-473,GATB_WOLSU/326-471),GATB_CAMJE/324-471))),Q7PAU2_RICSI/335-481),(GATB_FUSNN/329-480,(Q72VS5_LEPIC/332-479,(GATB_BORBU/335-482,(GATB_TREPA/359-506,GATB_TREDE/344-491)))))),(Q6KHR6_MYCMO/323-468,((GATB_MYCGE/324-469,GATB_MYCPE/328-477),(GATB_MYCGA/329-477,GATB_UREPA/330-475)))),((((Q12032_YEAST/31-181,((((Q88VR6_LACPL/6-146,Q831T4_ENTFA/6-146),Q74IY6_LACJO/6-146),(Q8EPX0_OCEIH/6-147,((YQEY_BACSU/6-147,(Q7ANY6_LISIN/6-147,Q9KD64_BACHD/6-146)),Q730M7_BACC1/6-146))),((((((((Q7MWM2_PORGI/6-148,(Q82EN2_STRAW/7-152,(Q744H8_MYCPA/7-154,(Q6NJU6_CORDI/7-153,(Q8NTM9_CORGL/7-149,Q8FTV7_COREF/7-153))))),(Q6NAA7_RHOPA/5-149,((Q8FZJ9_BRUSU/8-149,(Q8UDF8_AGRT5/5-149,Q92N96_RHIME/4-148)),Q98IA8_RHILO/4-148))),(Q50854_MYXXA/30-171,((Q7VWK1_BORPE/9-152,Q9I5V9_PSEAE/7-147),(((Q83BB8_COXBU/8-148,((P71480_LEGPN/6-145,((Q7MP01_VIBVY/6-146,Q6LV12_PHOPR/6-146),Q8EHD8_SHEON/6-146)),Q82XN0_NITEU/6-146)),((Q87B15_XYLFT/6-146,Q8P493_XANCP/6-146),Q9JW82_NEIMA/6-146)),(Q7NRL6_CHRVO/6-146,Q8XX99_RALSO/6-146))))),(Q72B47_DESVH/6-146,Q748B5_GEOSL/5-145)),Q8KES5_CHLTE/6-150),Q6MR59_BDEBA/6-147),Q72RP2_LEPIC/6-147),(Q9WZF4_THEMA/6-146,((Q8RB58_THETN/6-146,((Q97JJ1_CLOAB/6-146,Q8XIU1_CLOPE/7-147),Q892R6_CLOTE/12-152)),(Q7MQQ1_WOLSU/7-147,Q9PHU3_CAMJE/6-146)))))),((((((GATE_METTH/475-615,(GATE_METKA/492-634,GATE_HALN1/477-618)),GATE_PYRAE/479-607),GATE_AERPE/492-632),(GATE_ARCFU/471-607,GATE_METMA/480-626)),GATE_PYRHO/487-627),((GATE_METJA/484-627,Q6LXT2_METMP/483-626),(GATE_SULTO/486-627,GATE_SULSO/486-628)))),Q74MN5_NANEQ/304-440),(GATB_SULTO/330-476,((GATB_METMA/328-493,(GATB_METTH/303-449,GATB_METKA/307-457)),(GATB_METMP/314-467,GATB_METJA/321-470))))),(GATB_AQUAE/328-475,GATB_THEMA/332-479)),(Q9VCD0_DROME/361-511,(Q9UT77_SCHPO/374-522,(GATB_EMENI/427-576,GATB_YEAST/373-537)))),GATB_HUMAN/406-555,Q8BW84_MOUSE/406-549);
((((((((((GATB2_CLOAB/329-476:0.42488,(GATB_CLOTE/326-473:0.16730,GATB1_CLOAB/326-473:0.23711):0.07255):0.03934,((((GATB_STRMU/327-474:0.16745,GATB_STRR6/327-474:0.23535):0.21916,((Q71YR4_LISMF/326-473:0.18192,Q73EK7_BACC1/325-472:0.15203):0.05111,((GATB_LACJO/326-473:0.21346,GATB_LACPL/325-471:0.25650):0.10436,GATB_ENTFA/326-473:0.14678):0.06063):0.03189):0.02914,GATB_OCEIH/326-473:0.21692):0.04676,GATB_STASP/325-472:0.20945):0.10591):0.04966,GATB_THETN/326-473:0.38476):0.01325,((GATB_AERPE/333-478:0.80055,Q6MDF6_PARUW/341-490:0.21337):0.18830,((GATB_CHLTR/336-485:0.29255,GATB_CHLCV/336-485:0.16528):0.04288,GATB_CHLPN/336-485:0.21209):0.23577):0.13422):0.01666,(((GATB_WOLPM/326-472:0.33390,((Q6SGF1_9BACT/328-475:0.30362,((GATB_COXBU/328-477:0.29068,(((GATB_GEOSL/330-477:0.19791,(((((GATB_RHOPA/346-492:0.14550,GATB_BRAJA/344-490:0.09674):0.11469,GATB_AGRT5/351-496:0.19348):0.07244,GATB_CAUCR/350-495:0.23388):0.10138,(((((SYQ_DEIRA/710-851:0.50355,Q72H75_THET2/319-466:0.34010):0.07338,GATB_HALN1/346-492:0.31349):0.03876,(((GATB_TROW8/356-501:0.69369,GATB_CORDI/353-500:0.30584):0.11957,GATB_BIFLO/350-497:0.21647):0.06055,(GATB_MYCLE/359-506:0.38374,GATB_STRAW/353-500:0.12767):0.03135):0.21050):0.06393,(GATB_GLOVI/343-490:0.36612,Q72AV5_DESVH/328-475:0.32165):0.11962):0.03711,(GATB_RHOBA/349-494:0.56365,GATB_CHLTE/326-473:0.28155):0.13886):0.03809):0.03218,(((GATB_PSESM/328-479:0.17187,GATB_NITEU/327-476:0.34515):0.05912,GATB_NEIMA/327-475:0.33882):0.08037,((GATB_BORPE/332-483:0.16698,GATB_RALSO/333-485:0.15052):0.04365,GATB_CHRVO/327-474:0.21986):0.01932):0.07938):0.03779):0.10684,GATB_BDEBA/328-476:0.37599):0.06878,(((GATB_SYNEL/349-496:0.19132,GATB_ANASP/345-489:0.43465):0.09530,(GATB_PROMM/346-493:0.24744,(GATB_PROMP/341-488:0.31164,GATB_PROMA/342-489:0.17346):0.14997):0.08939):0.07940,Q9FV81_ARATH/399-546:0.35302):0.16059):0.11543):0.08264,GATB_MORCA/339-488:0.35221):0.05651):0.07880,((GATB_HELHP/328-473:0.19582,GATB_WOLSU/326-471:0.32222):0.11230,GATB_CAMJE/324-471:0.25883):0.16406):0.06508):0.11150,Q7PAU2_RICSI/335-481:0.29903):0.04390,(GATB_FUSNN/329-480:0.32763,(Q72VS5_LEPIC/332-479:0.32614,(GATB_BORBU/335-482:0.32811,(GATB_TREPA/359-506:0.46617,GATB_TREDE/344-491:0.19076):0.17068):0.09575):0.06802):0.04331):0.03686):0.03597,(Q6KHR6_MYCMO/323-468:0.48942,((GATB_MYCGE/324-469:0.46171,GATB_MYCPE/328-477:0.25364):0.10439,(GATB_MYCGA/329-477:0.43950,GATB_UREPA/330-475:0.30680):0.07359):0.06170):0.16098):0.07996,((((Q12032_YEAST/31-181:0.77923,((((Q88VR6_LACPL/6-146:0.30032,Q831T4_ENTFA/6-146:0.22849):0.04634,Q74IY6_LACJO/6-146:0.24765):0.08743,(Q8EPX0_OCEIH/6-147:0.22669,((YQEY_BACSU/6-147:0.23535,(Q7ANY6_LISIN/6-147:0.30239,Q9KD64_BACHD/6-146:0.17759):0.06047):0.03848,Q730M7_BACC1/6-146:0.21494):0.07328):0.06543):0.09835,((((((((Q7MWM2_PORGI/6-148:0.54423,(Q82EN2_STRAW/7-152:0.26008,(Q744H8_MYCPA/7-154:0.22841,(Q6NJU6_CORDI/7-153:0.23018,(Q8NTM9_CORGL/7-149:0.13843,Q8FTV7_COREF/7-153:0.17919):0.09062):0.15262):0.10284):0.08386):0.06113,(Q6NAA7_RHOPA/5-149:0.21375,((Q8FZJ9_BRUSU/8-149:0.26675,(Q8UDF8_AGRT5/5-149:0.20500,Q92N96_RHIME/4-148:0.11103):0.05801):0.09389,Q98IA8_RHILO/4-148:0.16977):0.07551):0.13431):0.04496,(Q50854_MYXXA/30-171:0.33770,((Q7VWK1_BORPE/9-152:0.24559,Q9I5V9_PSEAE/7-147:0.28630):0.04149,(((Q83BB8_COXBU/8-148:0.26097,((P71480_LEGPN/6-145:0.35706,((Q7MP01_VIBVY/6-146:0.12472,Q6LV12_PHOPR/6-146:0.24553):0.08068,Q8EHD8_SHEON/6-146:0.32784):0.09232):0.09206,Q82XN0_NITEU/6-146:0.30142):0.07519):0.11983,((Q87B15_XYLFT/6-146:0.26022,Q8P493_XANCP/6-146:0.08854):0.14104,Q9JW82_NEIMA/6-146:0.27261):0.06225):0.03468,(Q7NRL6_CHRVO/6-146:0.15596,Q8XX99_RALSO/6-146:0.14544):0.03419):0.05654):0.06841):0.04606):0.07290,(Q72B47_DESVH/6-146:0.35147,Q748B5_GEOSL/5-145:0.33467):0.06155):0.08369,Q8KES5_CHLTE/6-150:0.32657):0.21220,Q6MR59_BDEBA/6-147:0.29441):0.10121,Q72RP2_LEPIC/6-147:0.45871):0.14306,(Q9WZF4_THEMA/6-146:0.35821,((Q8RB58_THETN/6-146:0.26419,((Q97JJ1_CLOAB/6-146:0.22238,Q8XIU1_CLOPE/7-147:0.21345):0.08690,Q892R6_CLOTE/12-152:0.12874):0.14884):0.08789,(Q7MQQ1_WOLSU/7-147:0.31541,Q9PHU3_CAMJE/6-146:0.38716):0.14416):0.04088):0.06857):0.03377):0.02186):0.40552,((((((GATE_METTH/475-615:0.36155,(GATE_METKA/492-634:0.31948,GATE_HALN1/477-618:0.36818):0.14832):0.13566,GATE_PYRAE/479-607:0.58478):0.03791,GATE_AERPE/492-632:0.47010):0.09490,(GATE_ARCFU/471-607:0.37712,GATE_METMA/480-626:0.38299):0.10367):0.17557,GATE_PYRHO/487-627:0.28234):0.11141,((GATE_METJA/484-627:0.19508,Q6LXT2_METMP/483-626:0.30659):0.08407,(GATE_SULTO/486-627:0.21423,GATE_SULSO/486-628:0.29518):0.26746):0.07337):0.11467):0.21361,Q74MN5_NANEQ/304-440:0.80331):0.05947,(GATB_SULTO/330-476:0.41200,((GATB_METMA/328-493:0.51740,(GATB_METTH/303-449:0.31180,GATB_METKA/307-457:0.41263):0.14259):0.13723,(GATB_METMP/314-467:0.28607,GATB_METJA/321-470:0.26044):0.12366):0.12610):0.05198):0.03519):0.08659,(GATB_AQUAE/328-475:0.27401,GATB_THEMA/332-479:0.33273):0.12609):0.10351,(Q9VCD0_DROME/361-511:0.80284,(Q9UT77_SCHPO/374-522:0.62290,(GATB_EMENI/427-576:0.68924,GATB_YEAST/373-537:0.48885):0.09606):0.08113):0.06724):0.49089,GATB_HUMAN/406-555:0.07521,Q8BW84_MOUSE/406-549:0.23489);