EMBL-EBI > Goldman Group

PANDIT Home | Browse PANDIT | Help on PANDIT | Release notes | Pfam



PANDIT Homepage
pan•dit
PANDIT
Protein and Associated NucleotideDomains with Inferred Trees
(View raw data for PF02627 - CMD)
Carboxymuconolactone decarboxylase family
(Pfam reference: accession no. PF02627)
(Interpro reference: accession no. IPR003779)


sequences alignment phylogeny
amino acids
(Pfam-A seed alignment)
219 sequences @ 104 aa
(ave. pairwise identity: 0.21)
(view Jalview alignment from Pfam)
New Hampshire format
(total tree length: 129.44)
nucleotides
(available for above)
219 sequences @ 312 bp
(ave. pairwise identity: 0.37)
New Hampshire format
(total tree length: 92.18)
amino acids, restricted set
(corresp. to available nt seqs)
219 sequences @ 104 aa
(ave. pairwise identity: 0.21)
New Hampshire format
(total tree length: 129.44)