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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF02604 phylogeny
for restricted amino acid alignment


 
(((((((Q8PLK8_XANAC/10-84,((((YAFN_ECOLI/7-76,((Q88JZ5_PSEPK/7-79,((((Q8GEI6_ERWPY/8-80,Q9ZH43_MORMO/8-81),Q8ZPF8_SALTY/8-80),(Q60256_9ZZZZ/8-80,Q7N4Q7_PHOLL/8-80)),(Q08800_VIBCH/8-80,Q82UB1_NITEU/8-80))),(Q9KMA1_VIBCH/14-86,Q82UD0_NITEU/7-79))),Q8RBG2_THETN/22-97),(Q8YUZ9_ANASP/1-76,Q9X102_THEMA/6-78)),((Q8Y2S1_RALSO/6-78,(Q826S3_STRAW/2-76,Q9FCD0_STRCO/2-76)),((((Q7DCR7_VIBCH/1-68,(Q8E847_SHEON/1-68,Q7N5Y7_PHOLL/1-68)),(Q7N9R2_PHOLL/1-68,Q82T18_NITEU/1-65)),((Q8D9P8_VIBVU/8-81,(O70047_9ZZZZ/7-74,Q82UB6_NITEU/11-78)),(((Q8CLX8_VIBVU/1-74,Q8PR83_XANAC/1-74),Q9RIC5_YERPE/1-69),(Q83DQ1_COXBU/5-78,((Q7MYT0_PHOLL/5-78,Q82WH3_NITEU/5-78),Q8GNE6_9PROT/6-79))))),(((((Q99RM1_STAAM/1-74,(Q7P2C4_FUSNV/1-71,Q7P2Y6_FUSNV/1-74)),((Q8UDV1_AGRT5/1-74,((Q8DNR2_STRR6/14-88,Q8DX48_STRA5/1-75),Q83WJ8_ENTFC/1-75)),P73973_SYNY3/1-74)),(((Q88AP9_PSESM/1-74,Q88IQ9_PSEPK/1-74),(((Q7N280_PHOLL/1-74,Q7N6B4_PHOLL/1-74),((Y761_SYNY3/12-85,(Q82WG6_NITEU/16-89,(Q7N4P2_PHOLL/1-74,Q9Z5W8_FRANO/1-75))),(Q8KRD6_RHOER/1-74,Q8Z0C6_ANASP/19-92))),Q83AB4_COXBU/1-74)),(Y2754_SYNY3/1-74,((Q87NP7_VIBPA/16-89,Q8KPS5_SYNP7/17-90),Q82UX1_NITEU/17-91)))),((Q7PB29_RICSI/1-73,Q7U8N8_SYNPX/1-73),Q99RH5_STAAM/1-75)),(O33347_MYCTU/1-74,O50462_MYCTU/1-74)))))),(((O50412_MYCTU/12-84,Y3441_MYCBO/8-83),(O07782_MYCTU/2-74,P96916_MYCTU/1-74)),(((((Q87UE9_PSESM/1-69,(Q92K09_RHIME/1-70,Q9AH45_NEIME/1-74)),Q92SQ5_RHIME/1-72),((Q8Y121_RALSO/1-74,(Q89SG5_BRAJA/14-86,Q7NI03_GLOVI/2-75)),(Q7PA58_RICSI/1-74,Q82T22_NITEU/1-74))),(Q7NK01_GLOVI/1-75,Q7NMY2_GLOVI/2-76)),Q92JV5_RHIME/2-77))),Q8F586_LEPIN/1-76),Q8R721_THETN/2-77),Q8RAX6_THETN/1-75),Q82VL3_NITEU/3-76),Y4EA_RHISN/5-75,Q8KL67_RHIET/5-75);
(((((((Q8PLK8_XANAC/10-84:1.03296,((((YAFN_ECOLI/7-76:0.94735,((Q88JZ5_PSEPK/7-79:0.47669,((((Q8GEI6_ERWPY/8-80:0.26925,Q9ZH43_MORMO/8-81:0.28830):0.15803,Q8ZPF8_SALTY/8-80:0.12785):0.28845,(Q60256_9ZZZZ/8-80:0.08234,Q7N4Q7_PHOLL/8-80:0.19510):0.21842):0.17487,(Q08800_VIBCH/8-80:0.35506,Q82UB1_NITEU/8-80:0.12484):0.11806):0.34093):0.03337,(Q9KMA1_VIBCH/14-86:0.22306,Q82UD0_NITEU/7-79:0.27572):0.28094):0.00000):0.50924,Q8RBG2_THETN/22-97:0.93637):0.53006,(Q8YUZ9_ANASP/1-76:1.50805,Q9X102_THEMA/6-78:1.04175):0.20080):0.14478,((Q8Y2S1_RALSO/6-78:0.87207,(Q826S3_STRAW/2-76:0.18743,Q9FCD0_STRCO/2-76:0.27613):0.79970):0.43040,((((Q7DCR7_VIBCH/1-68:0.56806,(Q8E847_SHEON/1-68:0.19453,Q7N5Y7_PHOLL/1-68:0.23952):0.23290):0.25737,(Q7N9R2_PHOLL/1-68:0.35094,Q82T18_NITEU/1-65:0.57520):0.12161):0.29968,((Q8D9P8_VIBVU/8-81:0.60466,(O70047_9ZZZZ/7-74:0.23452,Q82UB6_NITEU/11-78:0.09384):0.54974):0.29597,(((Q8CLX8_VIBVU/1-74:0.15508,Q8PR83_XANAC/1-74:0.33843):0.39036,Q9RIC5_YERPE/1-69:0.70659):0.15089,(Q83DQ1_COXBU/5-78:0.28844,((Q7MYT0_PHOLL/5-78:0.18867,Q82WH3_NITEU/5-78:0.14686):0.18489,Q8GNE6_9PROT/6-79:0.49618):0.10519):0.37381):0.43941):0.19379):0.07587,(((((Q99RM1_STAAM/1-74:0.40698,(Q7P2C4_FUSNV/1-71:0.60674,Q7P2Y6_FUSNV/1-74:0.22042):0.24809):0.08809,((Q8UDV1_AGRT5/1-74:0.64924,((Q8DNR2_STRR6/14-88:0.21852,Q8DX48_STRA5/1-75:0.20999):0.32300,Q83WJ8_ENTFC/1-75:0.33713):0.39059):0.00255,P73973_SYNY3/1-74:1.00228):0.10375):0.06639,(((Q88AP9_PSESM/1-74:0.17864,Q88IQ9_PSEPK/1-74:0.21814):0.27349,(((Q7N280_PHOLL/1-74:0.30779,Q7N6B4_PHOLL/1-74:0.49123):0.10585,((Y761_SYNY3/12-85:0.48713,(Q82WG6_NITEU/16-89:0.08745,(Q7N4P2_PHOLL/1-74:0.48513,Q9Z5W8_FRANO/1-75:0.29437):0.22665):0.15486):0.12343,(Q8KRD6_RHOER/1-74:0.26581,Q8Z0C6_ANASP/19-92:0.58767):0.21771):0.03099):0.09331,Q83AB4_COXBU/1-74:0.58452):0.05222):0.06715,(Y2754_SYNY3/1-74:0.61864,((Q87NP7_VIBPA/16-89:0.24107,Q8KPS5_SYNP7/17-90:0.17963):0.09511,Q82UX1_NITEU/17-91:0.28212):0.29193):0.07527):0.11536):0.38781,((Q7PB29_RICSI/1-73:0.37751,Q7U8N8_SYNPX/1-73:0.43080):0.15808,Q99RH5_STAAM/1-75:0.84837):0.20711):0.25931,(O33347_MYCTU/1-74:0.51142,O50462_MYCTU/1-74:0.40552):0.12123):0.33356):0.09826):0.15926):0.59132):0.52643,(((O50412_MYCTU/12-84:0.99308,Y3441_MYCBO/8-83:0.65316):0.02048,(O07782_MYCTU/2-74:0.77336,P96916_MYCTU/1-74:0.79592):0.40524):0.19299,(((((Q87UE9_PSESM/1-69:0.39485,(Q92K09_RHIME/1-70:0.94370,Q9AH45_NEIME/1-74:0.49795):0.39936):0.45839,Q92SQ5_RHIME/1-72:0.57970):0.03600,((Q8Y121_RALSO/1-74:0.67182,(Q89SG5_BRAJA/14-86:0.55269,Q7NI03_GLOVI/2-75:0.37740):0.11394):0.08096,(Q7PA58_RICSI/1-74:1.16952,Q82T22_NITEU/1-74:0.79707):0.17938):0.76821):0.25575,(Q7NK01_GLOVI/1-75:0.35802,Q7NMY2_GLOVI/2-76:0.38563):0.27864):0.13356,Q92JV5_RHIME/2-77:1.31828):0.14280):0.27119):0.41895,Q8F586_LEPIN/1-76:1.26036):0.02740,Q8R721_THETN/2-77:1.17547):0.35333,Q8RAX6_THETN/1-75:1.21461):0.86485,Q82VL3_NITEU/3-76:0.51013):1.22668,Y4EA_RHISN/5-75:0.27122,Q8KL67_RHIET/5-75:0.02051);