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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF02604 phylogeny
for nucleotide alignment


 
((((((O33347_MYCTU/1-74,(Q9X102_THEMA/6-78,((Q8D9P8_VIBVU/8-81,(O70047_9ZZZZ/7-74,Q82UB6_NITEU/11-78)),((((Q8CLX8_VIBVU/1-74,Q8PR83_XANAC/1-74),Q9RIC5_YERPE/1-69),((Q8GNE6_9PROT/6-79,(Q7MYT0_PHOLL/5-78,Q82WH3_NITEU/5-78)),Q83DQ1_COXBU/5-78)),((Q7N9R2_PHOLL/1-68,((Q8E847_SHEON/1-68,Q7N5Y7_PHOLL/1-68),(Q7DCR7_VIBCH/1-68,Q82T18_NITEU/1-65))),(((Q7PA58_RICSI/1-74,(((Q8YUZ9_ANASP/1-76,Q8RAX6_THETN/1-75),Q8R721_THETN/2-77),Q8F586_LEPIN/1-76)),(((((Q99RM1_STAAM/1-74,((Q87NP7_VIBPA/16-89,Q8KPS5_SYNP7/17-90),Q82UX1_NITEU/17-91)),(Y2754_SYNY3/1-74,(((Q8Z0C6_ANASP/19-92,(Q7N280_PHOLL/1-74,Q7N6B4_PHOLL/1-74)),((Q7N4P2_PHOLL/1-74,Q9Z5W8_FRANO/1-75),(Y761_SYNY3/12-85,(((Q8KRD6_RHOER/1-74,(Q88AP9_PSESM/1-74,Q88IQ9_PSEPK/1-74)),Q82WG6_NITEU/16-89),(Q8UDV1_AGRT5/1-74,Q83AB4_COXBU/1-74))))),P73973_SYNY3/1-74))),((Q7PB29_RICSI/1-73,Q7U8N8_SYNPX/1-73),Q99RH5_STAAM/1-75)),((Q8DNR2_STRR6/14-88,Q8DX48_STRA5/1-75),Q83WJ8_ENTFC/1-75)),(Q7P2C4_FUSNV/1-71,Q7P2Y6_FUSNV/1-74))),((YAFN_ECOLI/7-76,((((Q08800_VIBCH/8-80,Q82UB1_NITEU/8-80),(Q8ZPF8_SALTY/8-80,(Q8GEI6_ERWPY/8-80,Q9ZH43_MORMO/8-81))),(Q60256_9ZZZZ/8-80,Q7N4Q7_PHOLL/8-80)),((Q9KMA1_VIBCH/14-86,Q82UD0_NITEU/7-79),Q88JZ5_PSEPK/7-79))),Q8RBG2_THETN/22-97))))))),O50462_MYCTU/1-74),((Q8Y2S1_RALSO/6-78,(Q826S3_STRAW/2-76,Q9FCD0_STRCO/2-76)),((Q92JV5_RHIME/2-77,(((Q8Y121_RALSO/1-74,Q82T22_NITEU/1-74),Q7NI03_GLOVI/2-75),Q89SG5_BRAJA/14-86)),(((Q92K09_RHIME/1-70,(Q87UE9_PSESM/1-69,Q9AH45_NEIME/1-74)),((Q7NK01_GLOVI/1-75,Q7NMY2_GLOVI/2-76),(Y3441_MYCBO/8-83,((O50412_MYCTU/12-84,O07782_MYCTU/2-74),P96916_MYCTU/1-74)))),Q92SQ5_RHIME/1-72)))),Q8PLK8_XANAC/10-84),Q82VL3_NITEU/3-76),Y4EA_RHISN/5-75,Q8KL67_RHIET/5-75);
((((((O33347_MYCTU/1-74:0.31277,(Q9X102_THEMA/6-78:0.67396,((Q8D9P8_VIBVU/8-81:0.50618,(O70047_9ZZZZ/7-74:0.30671,Q82UB6_NITEU/11-78:0.15976):0.24209):0.12224,((((Q8CLX8_VIBVU/1-74:0.17439,Q8PR83_XANAC/1-74:0.43161):0.26397,Q9RIC5_YERPE/1-69:0.45857):0.16168,((Q8GNE6_9PROT/6-79:0.32238,(Q7MYT0_PHOLL/5-78:0.23350,Q82WH3_NITEU/5-78:0.22588):0.11300):0.09347,Q83DQ1_COXBU/5-78:0.33182):0.08184):0.25626,((Q7N9R2_PHOLL/1-68:0.32924,((Q8E847_SHEON/1-68:0.21406,Q7N5Y7_PHOLL/1-68:0.21011):0.13010,(Q7DCR7_VIBCH/1-68:0.37371,Q82T18_NITEU/1-65:0.42567):0.12503):0.08211):0.19870,(((Q7PA58_RICSI/1-74:0.71596,(((Q8YUZ9_ANASP/1-76:0.66779,Q8RAX6_THETN/1-75:0.52098):0.01025,Q8R721_THETN/2-77:0.74791):0.11713,Q8F586_LEPIN/1-76:0.60945):0.09555):0.11169,(((((Q99RM1_STAAM/1-74:0.35525,((Q87NP7_VIBPA/16-89:0.17521,Q8KPS5_SYNP7/17-90:0.26558):0.16874,Q82UX1_NITEU/17-91:0.23210):0.19097):0.11753,(Y2754_SYNY3/1-74:0.41626,(((Q8Z0C6_ANASP/19-92:0.47726,(Q7N280_PHOLL/1-74:0.32804,Q7N6B4_PHOLL/1-74:0.34154):0.15231):0.04861,((Q7N4P2_PHOLL/1-74:0.36045,Q9Z5W8_FRANO/1-75:0.30811):0.14544,(Y761_SYNY3/12-85:0.36242,(((Q8KRD6_RHOER/1-74:0.34457,(Q88AP9_PSESM/1-74:0.23483,Q88IQ9_PSEPK/1-74:0.16886):0.24413):0.10093,Q82WG6_NITEU/16-89:0.17598):0.11628,(Q8UDV1_AGRT5/1-74:0.56879,Q83AB4_COXBU/1-74:0.30704):0.16264):0.13374):0.12842):0.05326):0.01734,P73973_SYNY3/1-74:0.62585):0.05628):0.03410):0.06566,((Q7PB29_RICSI/1-73:0.15999,Q7U8N8_SYNPX/1-73:0.58032):0.21583,Q99RH5_STAAM/1-75:0.38174):0.12130):0.05441,((Q8DNR2_STRR6/14-88:0.28208,Q8DX48_STRA5/1-75:0.18774):0.21011,Q83WJ8_ENTFC/1-75:0.31159):0.19208):0.05775,(Q7P2C4_FUSNV/1-71:0.28512,Q7P2Y6_FUSNV/1-74:0.19730):0.16555):0.07751):0.13624,((YAFN_ECOLI/7-76:0.59120,((((Q08800_VIBCH/8-80:0.18662,Q82UB1_NITEU/8-80:0.32877):0.18769,(Q8ZPF8_SALTY/8-80:0.20234,(Q8GEI6_ERWPY/8-80:0.32434,Q9ZH43_MORMO/8-81:0.28749):0.07619):0.11651):0.06083,(Q60256_9ZZZZ/8-80:0.19722,Q7N4Q7_PHOLL/8-80:0.18207):0.17059):0.16988,((Q9KMA1_VIBCH/14-86:0.26683,Q82UD0_NITEU/7-79:0.28409):0.12440,Q88JZ5_PSEPK/7-79:0.45375):0.07374):0.08696):0.32541,Q8RBG2_THETN/22-97:0.50505):0.25235):0.08878):0.08880):0.06269):0.25825):0.17742):0.07332,O50462_MYCTU/1-74:0.29523):0.20954,((Q8Y2S1_RALSO/6-78:0.51230,(Q826S3_STRAW/2-76:0.11547,Q9FCD0_STRCO/2-76:0.19020):0.36022):0.05560,((Q92JV5_RHIME/2-77:0.67421,(((Q8Y121_RALSO/1-74:0.38127,Q82T22_NITEU/1-74:0.63270):0.04085,Q7NI03_GLOVI/2-75:0.37454):0.16010,Q89SG5_BRAJA/14-86:0.30412):0.24182):0.09297,(((Q92K09_RHIME/1-70:0.48760,(Q87UE9_PSESM/1-69:0.27706,Q9AH45_NEIME/1-74:0.72697):0.16451):0.23430,((Q7NK01_GLOVI/1-75:0.30019,Q7NMY2_GLOVI/2-76:0.37130):0.13446,(Y3441_MYCBO/8-83:0.46955,((O50412_MYCTU/12-84:0.34972,O07782_MYCTU/2-74:0.56543):0.03662,P96916_MYCTU/1-74:0.44987):0.20976):0.16266):0.11744):0.08759,Q92SQ5_RHIME/1-72:0.42927):0.07149):0.14657):0.15202):0.32927,Q8PLK8_XANAC/10-84:0.59591):0.31730,Q82VL3_NITEU/3-76:0.58054):0.33498,Y4EA_RHISN/5-75:0.25852,Q8KL67_RHIET/5-75:0.12449);