EMBL-EBI > Goldman Group

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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF02540 alignment
(12 sequences with 1149 bp)


NADE_ECOLI/22-265 GAAATTCGTCGTAGTGTCGATTTTCTGAAAAGCTACCTGCAAACTTATCCGTTCattAAATCACTGGTGCTCGGGATCAGCGGCGGTCAGGACTCCACGCTTGCCGGAAAGCTGTGCCAGATGGCGATTAATGAGCTGCGCCTGGAAACCGGCAACGAATCACTGCAATTTATT------------------------...---------------------...---------------...------------GCCGTACGCCTGCCCTATGGTGTTCAGGCCGACGAACAAGATTGCCAGGATGCCATTGCCTTTATTCAACCG------GATCGCGTATTAACCGTTAATATCAAGGGCGCGGTATTGGCCAGCGAACAG------......GCATTGCGGGAAGCA---GGCATT..............................GAACTGAGCGATTTTGTCCGTGGCAATGAAAAAGCGCGTGAGCGGATGAAAGCACAATATAGCATTGCG------------------------------GGTATGACCAGCGGTGTCGTGGTGGGCACCGATCATGCAGCAGAAGCCATTACCGGATTCTTCACTAAA...TATGGTGACGGCGGTACGGACATTAATCCGCTGTATCGTCTCAACAAACGTCAGGGTAAACAGTTACTGGCGGCATTAGCT---------------TGCCCGGAACAC------..............................------------------------------CTTTATAAGAAAGCGCCAACGGCCGATCTG---------GAAGATGATCGCCCTTCTCTGCCAGATGAAGTGGCACTCGGCGTGACCTATGACAATATCGACGACTATCTGGAA------...------------------------------------------GGGAAAAACGTACCTCAACAGGTCGCCAGAACA---------......................................................------------------ATAGAGAACTGG------------------------------TATCTGAAAACCGAACATAAACGCCGTCCGCCA
NADE_BACSU/21-262 GAAATTGAGGACCGAGTCAATTTTTTAAAACAATATGTAAAGAAAACCGGTGCT...AAAGGCTTTGTATTGGGAATCAGCGGGGGCCAGGATTCAACACTTGCGGGAAGACTCGCTCAGCTTGCGGTGGAGAGCATTCGCGAGGAGGGC------GGAGACGCTCAATTTATC------------------------...---------------------...---------------...------------GCGGTCCGTCTTCCGCATGGCACACAGCAGGATGAAGACGATGCCCAGCTTGCTTTGAAGTTTATTAAGCCG------GATAAATCATGGAAGTTTGATATTAAATCGACAGTCAGCGCTTTTTCTGAT------......CAGTATCAGCAGGAAACAGGCGAT..............................CAGCTGACGGACTTTAATAAAGGAAACGTAAAAGCAAGAACAAGAATGATCGCGCAATACGCGATCGGC------------------------------GGCCAGGAAGGTCTTCTTGTGTTAGGAACAGACCATGCTGCTGAAGCAGTGACTGGTTTCTTTACGAAG...TACGGTGACGGCGGAGCAGACCTCCTGCCGCTGACAGGCTTGACGAAGCGCCAGGGAAGAACCTTGCTGAAAGAGCTGGGT---------------GCACCGGAACGC------..............................------------------------------TTATACTTAAAAGAACCGACTGCCGATCTG---------CTCGACGAAAAACCGCAGCAGTCGGATGAAACAGAGCTTGGCATTTCCTACGACGAGATTGACGATTATCTCGAA------...------------------------------------------GGAAAAGAAGTATCAGCGAAAGTATCAGAAGCG---------......................................................------------------CTGGAAAAACGC------------------------------TACAGCATGACTGAACATAAACGCCAGGTTCCG
NADE_MYCPN/8-237 TATTTAAACGAATTGGAAGCTTGACTCACCAATTACGTTAATGAAGCTCACGCT...CAGGGCGTGGTTGTTGGATTGTCAGGTGGAGTTGATTCGGCAGTTGTAGCCGCCATGACTAAAAAACTGTTT------------------------------CCGCAAAACCACTTA------------------------...---------------------...---------------...------------ACCTTGGTAATG------CACATTAATAACTCCGAGTTAGATCACAAGGCCACAACTGCCTTAGTGGAACAATTACAACTCAACAATAAACAGGTGGATTTAGAACCACCTTACCGCGCTATGTTGCAAGCATTG......ACCATTGATCCCCAAAAG------..............................------GAGTTAATGGTAGCCGGCAACCTCAAAGCACGTTTACGAATGGCTTGTCTATACACCCATGCC------------------------------CAAAAGCACAACTACTTAGTTTTGGGTACTGGCAACTTCATTGAGTACAGCTTGGGCTACTTTACTAAA...TGGGGTGATGGGGCGTGTGATGTGGCACCCTTAGCGTTCTTGTTAAAGAGCGATGTTTATGCTTTATCCCAGCACTTCAAT---------------GTTCCTGAATTG------..............................------------------------------GTCATTGAACGAGCCCCTACTGCTAGTCTG------------------TTTGCCGGGCAGACTGACGAAGCGGAAATGGGTTTGACGTATAAGGAATTGGACCAGTACTTTCAG------...---------------------------------------GGCCACTTACAGTTAAGTGCCACGAAACAACAACGG---------......................................................------------------GTTGACCACTTG------------------------------CGCCAAAGCTCCCAGCACAAGCGTAGTTTACCT
NADE_MYCGE/7-237 TATTTAAAAGAACTCCAAAACTGGCTGTTTGATTATGTAAAAAAATCTAAAGCT...AAAGGTGTTATTTTTGGCTTATCTGGAGGAATTGATTCAGCAGTTGTTGCTGCTATTGCTAAAGAAACTTTT---------------------------GGTTTTGAAAACCATTTA------------------------...---------------------...---------------...------------GCTTTAATAATG------CATATTAATAATTCAAAACTTGATTTTCAAGCAACTAGTGAACTTGTTAAAAAAATGCAATTTAATAGTATTAACATTGAACTGGAAGAGAGTTTCAATCTGTTAGTAAAAACCCTT......GGAATAGATCCAAAAAAA------..............................------GATTTTTTAACAGCTGGTAACATTAAAGCACGTTTACGGATGATAACTTTATATGCTTATGCT------------------------------CAAAAACACAACTTCTTAGTTTTAGGTACTGGTAATTTTGTAGAGTATACACTTGGTTATTTCACAAAA...TGAGGAGATGGAGCTTGTGATATTGCTCCTTTAGCATGGCTTTTAAAAGAGGACGTTTACAAATTAGCTAAGCATTTTAAT---------------ATTCCTGAAATT------..............................------------------------------GTAATCACAAGAGCGCCAACTGCTAGTCTT------------------TTTGAAGGGCAAACTGATGAGACAGAGATGGGCATTACTTATAAGGAACTTGATCAATATTTAAAA------...---------------------------------------GGTGATTTAATACTTAGTTCAGAAAAGCAAAAAATT---------......................................................------------------GTTTTAGATTTG------------------------------AAAGCAAAAGCAGAGCATAAACATAATTCACCT
NADE_SYNY3/281-530 TTGTGGCAAGCTCTGGTGTTGGGGGTGGGAGACTACCTCCACAAATGCGGTTTT...AGTAAGGCAATTTTAGGTCTGAGCGGCGGCATTGACTCTTCCCTAGTGGCGGCCATTGCTGTGGAAGCTTTG---------------------------GGCAAAGAAAATGTGCTG------------------------...---------------------...---------------...------------GGAATTTTGATGCCT---TCTCCCTACAGTTCTGACCATTCTATTCAGGATGCCTTGGCCTTGGCAAAGAATTTAGGTATGAATACCCAAACTATTCCCATTGGGCCGATTATGGCCACCTATGACCAGGCCCTAgtacccCTTTTTCAAGATGCCCCC------..............................------TTTGGCCTTGCCGAAGAAAATCTCCAGTCCCGCATCCGGGGCAACCTCCTGATGGCGATCGCC------------------------------AATAAATTTGGCCATCTACTCCTCAGCACTGGCAATAAATCGGAATTAGCGGTGGGTTACTGCACCCTC...TACGGGGACATGAACGGTGGCCTAGCGGCGATCGCCGACGTCCCCAAAACCCAAGTATTTGAACTATGCCGCTGGCTCAACCGGGAACAAACCATCATTCCCCCCAGC------..............................------------------------------GTTCTGACTAAACCGCCCAGCGCCGAACTC------------------AAACCAGGGCAAGTAGACACCGACTCCCTTCCC---CCCTACGATGTCTTGGACGGCATTCTTGGG------...AGATTAGTCGAAAAACATCAGTCTCCCCAGGAAATCATCAAC---GCAGGCTTTGAGCGGGAAGTCGTACTAAAA---------......................................................------------------ATTTGCCAACTA------------------------------GTGCAAAAGTCAGAGTTCAAACGTCGTCAGGCC
NADE_AQUAE/293-542 ATTTACGCCGCTCTAAAGCTCAGTCTGAGGGACTACGTTAGGAAAAACGGATTT...GAGAAGGTTGTCCTTGGGCTTTCGGGTGGGATAGACAGCTCTTTTGTTGCCTGCCTTGCGGTAGATGCCCTC---------------------------GGAAGGGAAAACGTGAAA------------------------...---------------------...---------------...------------GGTGTGTATATGCCC---TCTCAGTTTTCCTCAAAGGAGAGTTACGAGGACGCTAAAGCCCTAGCCCAGAACCTCGGTATAGAGTTTCACGTCATACCGATAAAAGAAATTTACAGGGCTTACTTTAAC------......GAGTTTGAGAAAGAAATATGTGAA..............................ATTACCTTTGACGTTGCCGACGAAAACATACAGGCACGCATAAGGGCAAACATCCTCTTTTACTTTTCA------------------------------AATAAGTTCCGTTATCTCGTTCTTTCCACTTCAAACAAGAGTGAAACGGCAGTGGGCTACACAACCATA...TACGGGGACATGGCGGGAGGTTTTGCCCCGATAAAAGACGTTTACAAAACGTGGGTTTACAAACTCGCAAGGTACAGAAACTCCATAAGCCCCGATATTCCCGAAAGA------..............................------------------------------GTGTTTAAAAAACCGCCTTCGGCGGAGCTC------------------AGACCAAATCAGACAGATCAGGACGTACTCCCG---CCTTACGAGATACTGGATCAAATACTCATG------...CTTTACATAGAGGAGAACTTGAGCCCTGAAGAGATAATCAGG---AAAGGACTTCCGAGGGATGCGGTGTACAAG---------......................................................------------------ACCATAAACATG------------------------------ATAAGGAAAAACGAGTACAAGAGAAAGCAGGCA
NADE_METJA/10-254 ATAGTTAATAAGATTACAAAATTTATCAGGGAGAAGGTTGAAGAAGCCAATGCC...AATGGAGTTGTTGTTGGATTAAGTGGGGGTATTGATTCTTCTGTTACAGCTTATTTATGTGTTAAGGCACTT---------------------------GGAAAAGATAAAGTTCTC------------------------...---------------------...---------------...------------GGCTTAATAATGCCA---GAGAAGAATACAAATCCAAAAGATGTTGAACATGCAAAGATGGTTGCTGAGAATTTAGGAATAAAGTATATTATCTCAGATATAACAGATATCTTAAAGGCATTTGGTGCTGGA---......GGTTATGTCCCAACGAGA------..............................GAGTTTGATAAGATAGCGGATGGAAATTTAAAGGCAAGGATTAGGATGTGCATCCTCTATTACTTTGCA------------------------------AATAAATATAATTTATTAGTTGCTGGAACTTCCAATAAATCTGAGATTTATGTTGGATATGGAACAAAA...CATGGAGACATTGCTTGTGATATAAGACCAATAGGCAATTTATTTAAAACAGAGGTTAAAAAACTTGCTAAATATATTGGT---------------GTTCCAAAGGAA------..............................------------------------------ATTATTGAAAAACCACCATCAGCAGGGCTT------------------TGGGAAGGACAGACAGATGAAGAGGAGCTTGACATTAAGTATGAAACTTTAGATACGATATTAAAG------...---CTTTATGAGAAGGGCAAAACTCCAGAGGAGATTCATAAAGAGACAAACATTCCATTGGAAACTATTAACTAT---------......................................................------------------GTGTTTGATTTA------------------------------ATTAAAAAGAATGAGCATAAGAGAACTTTACCT
NADE_PYRHO/9-245 GTTATCGAAAGGATACTAGAGTTCATAAGGGAGAAG------------GGGAAT...AATGGTGTCGTCATTGGAATAAGCGGAGGAGTAGATAGTGCAACTGTTGCTTACCTAGCAACTAAAGCCCTA---------------------------GGGAAAGAGAAAGTCCTC------------------------...---------------------...---------------...------------GGTTTAATAATGCCC---------TACTTTGAGAATAAAGACGTTGAAGATGCCAAGCTCGTCGCTGAAAAATTGGGAATAGGGTATAAAGTGATAAACATAAAGCCGATAGTCGATTCATTTGTGGAG------......AACCTTGAGCTAAACTTG------..............................------GATAGGAAAGGACTCGGGAACATAATGTCCAGAACTAGGATGATAATGCTCTACGCTCACGCA------------------------------AATTCTTTGGGGAGAATAGTTCTAGGAACTAGCAACAGGAGTGAGTTTCTAACTGGATACTTCACGAAA...TGGGGAGATGGAGCGAGTGACTATGCCCCAATAATAAATCTCTACAAAACCGAAGTGTGGGAGATAGCGAAGAGGATAGGA---------------GTCCCCGAGAGA------..............................------------------------------ATAGTCAAGAAAAAACCAAGCGCTGGACTC------------------TGGGAGGGCCAGACGGATGAAGACGAACTTGGAATTAGCTATAACCTTCTCGATGAGATACTTTGG------...AGGATGATAGATCTTAAGATCGGGAAGGAGGAGATAGCCAAAGACCTAGGTATACCGCTGAGCTTGGTAGAACGT---------......................................................------------------GTTGAAGAATTG------------------------------ATAAAGAAAAGCGAGCACAAGAGAAGGTTACCG
NADE_ARCFU/6-238 GTCGTTGAGAGAATTTGTGATTTCATAAGGGGTGTTGTTTCATCATCAGGTTCA...ACGGGAGTTGTTCTGGGATTGAGTGGTGGTGTCGACAGCGCAACCGTTGCTTATCTCTGCGTGAGGGCTCTT---------------------------GGGAGCGAGAGAGTTTTT------------------------...---------------------...---------------...------------GCGCTCATCATGCCTGAGACTGGAGTGACTCCTGAGCAGGATGTTGAGGATGCGATAAATGTCGCGGAGAGCCTCGGAATGGAATACAAGCTGATTGAAATCAATGACATCGTTAGAGTTTTCAAAGAA------......AAGGCCGGAGAGGGAAGC------..............................---------AAGATCGCGGAGGCGAATTTAAAGCCGAGGATAAGAATGGTGCTCAACTACTATCATGCC------------------------------AACAGCATGAACAGGCTTGTTGCGGGGACCGGAAACAAAAGCGAGCTAATGGTGGGGTACTTTACCAAA...TACGGGGATGGCGGAGTGGATTTCCTGCCAATAGGAGATCTCTACAAGACCGAGGTATTTCAGCTTGCCGCCTATCTCGGA---------------GTTCCAAGGAGA------..............................------------------------------ATAATCGAGAAGAAGCCTTCTGCAAGGCTG------------------TGGCCTGGCCAGACCGATGAGGAGGAGATGGGAATAAGCTACGCCGAGCTTGACGAAATCTTAAAG------...---CTGATCGAGAAGGGGGAGAGGAGAGACGAT---------------------------GAGAAGTTCAGGAGA---------......................................................------------------GTTGTGCAGATG------------------------------GTTGAGAGGTCGAGGCACAAGAGGGAGATGCCT
NADE_HELPY/8-251 CTCATCGTTTATTTATGCGATTTTTTAGAAAAAGAAGTGCAAAAACGCGGCTTT...AAAAAAGTCGTTTACGGGCTGAGCGGGGGGCTAGATAGCGCGGTCGTTGGGGTGCTGTGTCAAAAAGTTTTT------------------------------AAAGAAAACGCTCAT------------------------...---------------------...---------------...------------GCCCTTTTAATGCCC---TCTTCAGTCTCTATGCCAGAAAATAAAACAGACGCCCTAAATTTGTGCGAAAAATTTTCTATCCCTTATACAGAATATTCTATCGCTCCCTATGACGCCATCTTTAGCTCT------......CACTTTAAAGACGCAAGC------..............................---------CTTACTAGGAAGGGGAATTTTTGCGCAAGATTGCGCATGGCTTTTTTATACGATTATTCT------------------------------TTAAAAAGCGATTCTTTAGTCATTGGCACGAGCAATAAAAGCGAAAGAATGCTAGGCTATGGCACTTTA...TTTGGGGATTTGGCGTGCGCGATTAACCCGATTGGGGAATTATTTAAAACCGAAGTTTATGAACTCGCTCGCCGTTTAAAT---------------ATCCCTAAAAAG------..............................------------------------------ATTTTAAATAAGCCCCCTAGCGCAGATTTA------------------TTTGTGGGGCAAAGCGATGAAAAAGATTTGGGCTATCCTTATAGCGTGATCGATCCTTTATTGAAGGATATTgaaGCGTTGTTTCAAACAAAGCCCATTGATACAGAAACGCTCGCTCAATTAGGCTATGATGAAATTTTAGTGAAAAAC---------......................................................------------------ATCACAAGCCGT------------------------------ATCCAAAAAAACGCTTTTAAATTAGAATTACCC
NADE_YEAST/336-659 ATTGCACTGGGACCTGCTTGCTGGATGTGGGATTATTTAAGACGTTGTAACGGA...ACAGGGTTTTTCCTTCCCTTATCTGGGGGCATTGACTCTTGTGCAACTGCAATGATTGTCCACTCTATGTGCCGTTTAGTGACCGACGCTGCTCAAAATGGAAATGAGCAAGTTATCAAAGACGTTCGTAAGATAACACGTagcGGCGATGATTGGATTCCAGACagtCCACAGGATCTAGCCtcaAAAATATTTCACTCCTGTTTCATGGGT---ACGGAAAATTCATCCAAGGAGACAAGAAACAGAGCAAAGGACCTTTCCAATGCAATTGGATCTTACCACGTGGATTTAAAGATGGACTCATTGGTATCCAGTGTGGTGTCC------......TTATTCGAAGTAGCCACTGGCAAAaaaccaatatacaaaatatttgggggatctCAAATCGAGAACTTGGCTTTACAAAACATCCAGGCGCGTCTAAGAATGGTTCTTTCTTATCTTTTTGCGCAACTGTTGCCGTGGGTTCGTGGTATCCCAAACTCGGGTGGATTGTTAGTACTTGGTAGCGCAAATGTTGATGAGTGCTTACGTGGGTATCTAACAAAA...TATGACTGCTCCTCCGCAGATATCAACCCTATTGGGGGTATTTCAAAAACTGACTTGAAAAGATTCATTGCCTACGCATCAAAACAATATAAC---ATGCCAATCTTG------..............................------------------------AATGACTTTTTAAACGCTACACCAACTGCAGAATTA---GAACCTATGACTAAAGATTACGTTCAATCGGATGAGATAGATATGGGGATGACGTATGAAGAATTGGGCGTGTTTGGTTAC------...CTAAGAAAGGTTGAAAAATGTGGTCCTTATTCTATGTTCTTAAAACTTCTTCATCAATGGTCCCCAAAGTTAACA---------......................................................------------------CCTCGTCAAATATCTGAAAAGGTGAAAAGATTTTTCTTCTTCTATGCCATCAACAGACACAAGCAAACTGTTTTA
NADE_MYCTU/343-639 GCCTACAACATCCAGGTGTCTGGACTCGAGCAACGGTTGCGGGCGCTGGACTAT...CCGAAGGTCGTTATCGGTGTGTCCGGGGGATTGGACTCGACGCACGCGCTGATCGTCGCGACCCATGCCATGGACCGCGAG------------GGCCGGCCGCGCAGCGACATTCTG------------------------...---------------------...---------------...------------GCGTTTGCGTTGCCC---GGATTCGCCACCGGGGAGCACACTAAGAACAACGCGATCAAGCTGGCACGTGCGCTGGGGGTTACCTTCTCCGAAATCGATATCGGCGACACCGCTCGGTTGATGCTGCACACAATC......GGCCATCCGTATTCGGTTGGCGAA..............................AAAGTGTACGACGTCACCTTCGAGAACGTCCAGGCCGGGTTGCGCACCGACTATCTTTTCCGTATCGCC------------------------------AACCAGCGCGGGGGAATCGTACTGGGCACCGGGGACCTGTCGGAGCTGGCACTGGGTTGGTCGACATACggtGTCGGCGACCAGATGTCGCACTACAACGTCAACGCCGGTGTGCCCAAGACGCTGATCCAGCACCTGATCCGGTGGGTC------------------ATTTCGGCGGGTGAGTTC..............................GGTGAGAAGGTGGGTGAGGTATTGCAGTCGGTGCTCGACACCGAGATCACCCCCGAACTCATT---CCGACCGGCGAGGAGGAGCTGCAGAGCAGCGAGGCCAAGGTCGGA---CCTTTCGCCCTACAGGACTTTTCGCTTTTT------...CAGGTACTGCGCTACGGATTTCGCCCGTCGAAGATTGCGTTTTTGGCCTGGCATGCGTGGAACGATGCGGAGCGGGGCAACTGGccgcccggcttcccaaagagcgaacgcccgtcctattcattggccgaaatccggCATTGGCTGCAGATTTTCGTCCAGCGGTTT------------------------------TATTCGTTTAGCCAGTTCAAGCGTTCGGCATTG