EMBL-EBI > Goldman Group

PANDIT Home | Browse PANDIT | Help on PANDIT | Release notes | Pfam



PANDIT Homepage
pan•dit
PANDIT
Protein and Associated NucleotideDomains with Inferred Trees
(View raw data for PF02525 - Flavodoxin_2)
Flavodoxin-like fold
(Pfam reference: accession no. PF02525)
(Interpro reference: accession no. IPR003680)


sequences alignment phylogeny
amino acids
(Pfam-A seed alignment)
43 sequences @ 247 aa
(ave. pairwise identity: 0.24)
(view Jalview alignment from Pfam)
New Hampshire format
(total tree length: 29.70)
nucleotides
(available for above)
42 sequences @ 741 bp
(ave. pairwise identity: 0.38)
New Hampshire format
(total tree length: 20.25)
amino acids, restricted set
(corresp. to available nt seqs)
42 sequences @ 247 aa
(ave. pairwise identity: 0.24)
New Hampshire format
(total tree length: 29.42)