EMBL-EBI > Goldman Group

PANDIT Home | Browse PANDIT | Help on PANDIT | Release notes | Pfam



PANDIT Homepage
pan•dit
PANDIT
Protein and Associated NucleotideDomains with Inferred Trees
(View raw data for PF02499 - DNA_pack_C)
Probable DNA packing protein, C-terminus
(Pfam reference: accession no. PF02499)
(Interpro reference: accession no. IPR003498)


sequences alignment phylogeny
amino acids
(Pfam-A seed alignment)
13 sequences @ 374 aa
(ave. pairwise identity: 0.47)
(view Jalview alignment from Pfam)
New Hampshire format
(total tree length: 4.99)
nucleotides
(available for above)
10 sequences @ 1122 bp
(ave. pairwise identity: 0.53)
New Hampshire format
(total tree length: 3.62)
amino acids, restricted set
(corresp. to available nt seqs)
10 sequences @ 374 aa
(ave. pairwise identity: 0.47)
New Hampshire format
(total tree length: 4.19)