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 pan•dit |
PANDIT Protein and Associated NucleotideDomains with Inferred Trees |
| (View raw data for PF02482 - Ribosomal_S30AE) |
| Sigma 54 modulation protein / S30EA ribosomal protein |
| (Pfam reference: accession no. PF02482) |
| (Interpro reference: accession no. IPR003489) |
| sequences | alignment | phylogeny |
| amino acids (Pfam-A seed alignment) |
16 sequences @ 110 aa (ave. pairwise identity: 0.31) (view Jalview alignment from Pfam) |
New Hampshire format (total tree length: 10.47) |
| nucleotides (available for above) |
16 sequences @ 330 bp (ave. pairwise identity: 0.44) |
New Hampshire format (total tree length: 7.56) |
|
amino acids, restricted set (corresp. to available nt seqs) |
16 sequences @ 110 aa (ave. pairwise identity: 0.31) |
New Hampshire format (total tree length: 10.47) |