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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF02480 alignment
(13 sequences with 530 aa)


VGLE_VZVD/189-619 QRIYGVRYTETWSFLPSLTCTGDAAPAIQHICLKHTTCFQDVVVD---------VDCAENTKEDQLAEISYRFQ-GKKEADQPWIVVNTSTLFDELELDPPEIEPGVLKVLRTEKQYLGVYIWNM-----RGSDGTSTYATFLVTWKGDEK-----.......-TRNPTPAVTPQP-..--RGAEFHMWNYHSHVFSVGDTFSLAMHLQYKIHEA-.PFDLLLEWLYVPID.PTCQPMRLYSTCLYHPNAPQCLSH-MNSGCTFTSPHLAQRVASTVYQNCEHADN--YTAYCLGISHMEPSFGLILHDGGTTLKFVDTPESLSGLYVFVVYFNGHVEAVAYTVVSTVDHFVNAIEERGFPPTAGQPPATT--------KPKEITPVN----P-GTSPLLRYAAWTGGLAAVVLLCLVIFLICTAKRMRVKAY--RVDKSPYNQSM---.-YYAGLPVDDFEDSESTDTEEEFGN--------A------------------....----------IGGSHGGSSYTVYI
VGLE_CHV9D/173-599 PQENEHTYTERWSFLPAAPCK-LTPPSIQQVCIKHGACIHDVVVD---------VDCIAESMEHTLVEIGYVVH-ASKAVHPTWTVVNITEDFANYGFDTPDVKPGVLKFEHMNAHHAGVYIWNL-----QGTHGENMYVTFLVKLNNSIE-----.......-NHIDLPAVTPKP-..--KGAEFHTWHYHSHVFSVGETFSLPMHLQYKIHDT-.PFDLLLEWLYVPIN.PTCQPMRLYSACVYHETVPSCLSP-ENPECTFASPHIARRVANTVYQNCEHVN---YTADCLAVSHVEPGSGLEIQNGGSALLFVNAAESMSGLYVFIIHFNGHVETVAYTVVSTIENFVNAIEEHGFPPEIHNVPSPS--------SPN-VTANNDVISETNTFPFKTYAGITGGFAVLALVCLALALVCTKRKFGHRSY--WSDKAAYGQST---.-YYAGVPVDDFED----DTEVEVD----------------------------....----------EGAECGGSGYTVYI
VGLE_EHV1B/45-517 PTNTTTRVTKAWTFLETPPG-CAGDISVKKVCVSHSLCEDNIIIG---------KHCNLLTGEHGIALAEFNVVNGSLRRTDDVYFVNGTVFPILAETRS-----V-LQIHRATPSIAGVYTLHV-----SIDG-MMKHSVVLLTVKKPPKQPQPR.......LRVKTPPPVTVPQVp.VKTHTDFVVHGYHSRVYADGESFELSVNLESHIVEP-.SFSAEIQWYYMNTSsSSCDLFRVFETCIFHPTAMACLHP-EQHTCSFTSPIRATKILHRVYGNCSDHGNS-WPSRCHSTLLGNRLYFIQPAQNRVDLLFKDTPASATGLYVFVLLYNGHPEAWTYTLLSTANHFMNVLTDVTRPRLGEHFYTDL------GHKIITPHPSVATTEELG-AWTRHYLAFLLVIICTCAALLVALVVWGCILYIRSNRKPYEVLNPFET-----.-VYTSVPSNDPSDEVLVFERLASDS----DDSFD-SDSDEELEYPPPPKPAP....QLPPYQFVDGGDAPSGRSGFKVWF
Q66930_FHV1/42-503 PLNKTSHFLRGWTFLETPKG-CTGEVSVLKVCIDRGVCPDDIVIN---------KRCGHKMLETPLALAEFGISNSSLIRTKDVYFVNKTVFPILTPEKS-----G-LGIQGATTNISGIYTLHE-----HGDNGWSHQSTFFVTVKAKHPGP---.......-SLTPAPVHLITPH..-RHGAHFHVRNYHSHVYIPGDKFLLEMHLKSDIYDP-.EFSATIDWYFMETD.IKCPVFRIYETCIFHPHAASCLHP-EDPSCSFTSPLRAVSLINRFYPKCDHRYAD-WTSRCINTPSINHMPYIEQPANNVDLKFINVPTNASGLYVFILRYNGHPEEWTYTLISTGAKFLNVIRDLTRPRLGSHQIET-------DISTSSQSPTTETPRNIHITWARRYLKVIIGIICVAGILLIVISITCYIRFRHMRYKPYEVINPFPA-----.-VYTSIPSNDP--DELYFERIASNDEESADDSFDESDEEEPLNN-------H....HISTTQHTDI-NPEKSGSGYSVWF
O41526_9ALPH/43-492 PFNETKKFTRGWVFLQTPPSYCKDGISISNICIERNICEEDIFLN---------KRCTIKTINYPLAVADFEISNNTIKKINDVYFVNDSVFPIITTNKS-----G-IHITNVTINNSGIYTLYE-----NNDK-WSHQSKILVTIKKKE------.......-TVITKPKVYIK--..-KHGGFFHVKNYHSHVFVPNDSFKIELNLESEIYDS-.EFSASIDWYYMKTS.SECSVFHIYETCIFHPHANSCLNP-INPLCSFTSPLRATSLINRFYFRCKPEGKN-WTTDCINTFSINADKHIKQHSNNVDLIFLNTPTNASGLYVFILKYNGHPEAWTYTLVSTVKNFMNVIKDMTRPLLSNNKMKKP------EHSTQPPTITNITPGFKSKNWVDKYIISVAVVSCITIVILIVVITFCVHQCIGLNRKPYEIINPFNT-----.-AYKSIPTNEK--NILHFAEVTESD-YSSDESFD-SDSEE-LN--------Q....RGETIQQ-----GKKEQSGYTIWF
VGLE_BHV1S/58-544 AARPDVRAVRGWSVLAGACS----PPVPEPVCLDDRECFTDVALD---------AACLRTARVAPLAIAELAER--PDSTGDKEFVLADPHVSAQLGRNATG-----VLIAAAAEEDGGVYFLYDRLIGDAGDEETQLALTLQVATAGAQGAARDEerepatgPTPGPPPHRTTTRAppRRHGARFRVLPYHSHVYTPGDSFLLSVRLQSEFFDEA.PFSASIDWYFLRTA.GDCALIRIYETCIFHPEAPACLHP-ADAQCSFASPYRSETVYSRLYEQCRPDPAGRWPHECEGAAYAAPVAHLRPANNSVDLVFDDAPAAASGLYVFVLQYNGHVEAWDYSLVVTSDRLVRAVTDHTRPEAAAADAPE---------PGPPLTSEPAG---APTGPAPWLVVLVGALGLAGLVGIAALAVRVCARRASQKR-TYDILNPFGP-----.-VYTSLPTNEPLDVVVPVSDDEFSLDEDSFADDDSDDDGPASNPPADAYDLAgapePTSGFARAPANGTRSSRSGFKVWF
VGLE_PRVRI/81-550 PPAHLVNVSEGANFTLDARG---DGAVVAGIWTFLPVRGCDAVAVT--------MVCFETACHPDLVLGRACVPEAPERGIGDYLPPEVPRLQREPPIVTPERWSPHLTVRRATPNDTGLYTLHD---------ASGPRAVFFVAVGDRP------.......--PAPLAPVGPAR-..--HEPRFHALGFHSQLFSPGDTFDLMPRVVSDMGDSReNFTATLDWYYARAP.PRCLLYYVYEPCIYHPRAPECLRP-VDPACSFTSPARAALVARRAYASCSPLLGDRWLTACPFDAFGEE---V------H--TN--ATADESGLYVLVMTHNGHVATWDYTLVATAAEYVTVIKELTAPARAPGTPWGPGGGDDAIYVDGVTTPAPPARPWNPYGRTTPGRLFVLALGSFVMTCVVGGAVWLCVLCSRRRAASRPFRVPTRAGTRMLsPVYTSLPTHEDYYDGDDDDEEAGDARRRPSSPGGDSGYEGPYVSLDAEDEFS....-SDEDDGLYVRPEEAPRSGFDVWF
Q88525_MEHV1/41-484 PLTNGTIYTETWTWISSICN----DTSMGYICLDRATCFQDLLLG---------TSCVRYGEEKILRVDRFVVNSGSLDRIASSQFHYIPNVIIGTGRGK-----E-LTIFNATSQIAGVYTRYT-----RNDSRPAVMDVLLVWVSVHGQAP---.......-DRTMNIYITPPS-..--TRVDLTFKNFNAFLFNAGDTVDASVTAHLTNWAG-.AFSLEFKLLFLPYN.SKCLYLTVYEPCIFHPSESECQMVPEHAECRFAANMDVMQLASARTDGCRVDVR--GCTFQTSVDESVQGKLAFLESDVPSFRLANAQPTDAGLYVIVGLYNGRPLAWTYVYLSTLETILNVFEDVHKPGFGYNAVSAD--------TPGNFTAAPTHTSAFKEGPTVIYSLLVSSMAAGVILVLLLFALLIVGLYKRHAR--HRTNGYFQAYP---.-KYSSLPSNDECVFGDGDFNSPLSNTCEGLSRGLAGNSKS------------....----------RTPKQKGSRYHAWF
Q69288_MEHV1/41-482 PVVDGTLYTETWTWIPNH-CN---ETATGYVCLESAHCFTDLILG---------VSCMRYADEIVLRTDKFIVDAGSIKQIESLSLNGVPNIFLSTKASN-K-----LEILNASLQNAGIYIRYS-----RNGTRTAKLDVVVVGVLGQAR-----.......-DRLP-QMSSPMIS..SHADIKLSLKNFKALVYHVGDTINVSTAVILGPSPE-.IFTLEFRVLFLRYN.PTCKFVTIYEPCIFHPKEPECITTAEQSVCHFASNIDILQIAAARSENCSTGYR--RCIYDTAIDESVQARLTFIEPGIPSFKMKDVQVDDAGLYVVVALYNGRPSAWTYIYLSTVETYLNVYENYHKPGFGYKSFLQNSS----IVDENEASDWSSSSIKRRNNGTIIYDILLTSLSIGAIIIVIVGGVCIAILIRRRRR--RRTRGLFDEYP---.-KYMTLPGNDLGGMNVPYDNTCSGNQVEYYQEKS------------------....----------AKMKRMGSGYTAWL
Q67635_9ALPH/51-476 PVVDGTPYTETWTWISNR-CN---ETATGYVCLDSVNCFHDLIVK---------MACWRYSKEVILRTARFVVERGVLKTIETAKLRNAPRVLIVDNVDT-Q-----WTVLNASEQNAGIYIRYS-----RNGTRTAHVDAIVLAVSGRKR-----.......-GRVP-PTVYPVGP..FLHKFQISLKNFKTFLYQVGDTVTISITTRLETTVR-.AFKLEFRVMFLPYS.PNCKSFTIYEPCIFHPKEPECISPSELSECRFASNAQVLEIAAARSVNCSAG-R--ACHYDAEVDESMQQRFAFLYSEIPSFTIGNAGPGDAGLYVVVALCDERPTTWTHVYLSTLDKILDVHEIAHKPGFDDRVLSSN--------DDAARGVRPGAAIEKESGRLRLSGALIASIVLVAAAVVTTVSFCGACVFRWRRRCHRKTQAPGNS-C---.-KYMSLPQNHWEEF---YDDVRVGS--------A------------------....----------LSMSSLTKG-CPRE
VGLE_HHV11/59-509 PLDGCGPLHPSWVSLMPPKQ--VPETVVDAACMRAPVPLAMAYAPPAPSATGGLRTDFVWQERAAVVNRSLVIH-GVRETDSGLYTLSVGDIKDPARQVASVVLVVQPAPVPTPPPTPADYDEDD-----NDEGEDESLAGTPASGTPRLPPP---.......PAPPRSWPSAPEVS..HVRGVTVRMETPEAILFSPGETFSTNVSIHAIAHDDQ.TYSMDVVWLRFDVP.TSCAEMRIYESCLYHPQLPECLSP-ADAPCAAST--WTSRLAVRSYAGCSRTN---PPPRCSAEAHMEPVPGLAWQAASVNLEFRDASPQHSGLYLCVVYVNDHIHAWGHITISTAAQYRNAVVEQPLPQRGADLAEPTH------PHVGAPPHAPPTHGALRLGAVMGAALLLSALGLSVWACMTCWRRRAWRAVKSRASGKGPTYIRVADSE---.-LYADWSSDSEGERDQVPWLAPPERP--------------------------....----------DSPSTNGSGFEILS
P89475_HHV2/57-504 PLDACGPLRPSWVALWPPRR--VLETVVDAACMRAPEPLAIAYSPPFPAGDEGLYSELAWRDRVAVVNESLVIY-GALETDSGLYTLSVVGLSDEARQVASVVLVVEPAPVPTP--TPDDYDEED-----DAGVTNARRSAFPPQPPPRRPP----.......VAPPTHPRVIPEVS..HVRGVTVHMETLEAILFAPGETFGTNVSIHAIAHDDG.PYAMDVVWMRFDVP.SSCADMRIYEACLYHPQLPECLSP-ADAPCAVSS--WAYRLAVRSYAGCSRTT---PPPRCFAEARMEPVPGLAWLASTVNLEFQHASPQHAGLYLCVVYVDDHIHAWGHMTISTAAQYRNAVVEQHLPQRQPEPVEPTR------PHVRAPHPAPSARGPLRLGAVLGAALLLAALGLSAWACMTCWRRRSWRAVKSRASATGPTYIRVADSE---.-LYADWSSDSEGERDGSLWQDPPERP--------------------------....----------DSPSTNGSGFEILS
Q69371_9ALPH/61-500 SMRNCGPLRPSWVSLHPPGQ--VLETVVDAQCVGAPRLMAAWYG--RPDGAPAPAPEAAWPPRVSVSNGTLTLG-GPTERQSAMYVLTVSRAPNSTAARRVVFLTVGPRVAAAVPGGPPPLAEG-------AG----AEAGAAATRAPAAHP----.......-YPYPHPHPIAEVA..HVHGVTVSLRTQTAILFSPGDTVHTAVSIVPLAHDDD.PYVMEVVWVRFDVP.EECGEMRIYEPCLYHPRLPECRSP-ADAPCAASV--WTERLAVRRYGPCSRHV---PPPRCPTDAAMEARPGLGWYGPTVNLQLRERSEASGGLYVCVVYVNGHVHAWGHVVVSTAARYRNAVVERSLPRYRPPPAAPT-------PSARPQGPRPALRSP-RLVGVFGAALGLAAAGLSVWACVTCRRARAWRAVKKRDPGT-QTYIRLADDE---.-LYADLSSDGGWEDSEDDDSDDDRLPG------T------------------....----------DRPPKRGSGFQILS