EMBL-EBI > Goldman Group

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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF02424 alignment
(11 sequences with 1074 bp)


Q9ZF33_BRAJA/16-342 GCCGCGACCGCAGGCTCGGCGTTTCTTTCCGGCGGAGGACACGCGTCC------TCGACCGGGGCAGTGCGTTGGCGCGGATCGGCGCTCGGCGCGCAGGTGTCGATCGATATCTTCCATCCCGATCGGGAG---GAGGCGGAAAGGATCATTCAGGATTGCCTGACT---GAGGTAAGACGACTCGAAGGGCAGTTCAGCCTGTACCGGGCGGATTCCGCCATTTGTGCCCTCAACCGGAGT---......GGCATCCTTGTCGCACCGGAGCCCGACATGGTCGCGCTGCTCAAGGCCTCGCTGCAATTCTCCGACCTTACCGGCGGCACCTTCGATCCCACCGTCCAGCCGCTCTGGCAGCTCTATGCCGCACACTTTTCGTCGGAGAATCCGGATCCCGGCGGTCCGCCGGCCGGGAAGCTGGCGGAGGCGCTCGCGAAGGTGGGCAGCAGCGGCCTGCGCGTAAGC---.........---GAAAAGCTTGTGGCGCTCCTCAGA------CATGGCGCTGCGATCACCCTGAACGGCATCGCCCAAGGATACGCCACCGACCGTGTCGTGGATGTCTTGCGCGCCCGCGGGTTGTCGACGACCCTCGTCAACATGGGT---GAGATCCGCGCGCTCGGAGCGCGCGCGGACGGGACG........................CCGTGGCGCGTCGGCCTTTCCGATCCGGACAGAGCC------GGCGCGCTCACGGAAACCATCGACCTCATTGATCGGGCGGTCGCGACCACCGCGGGCGCGGGCTTCCGCTTCGATCCGGCGGGCCGG---TTCACGCATCTATTCGATCCCCGGACGGGACGGAGCCCTGCGCTCTAT---------------CGGACCGTCAGCGTCATTGCGCCGACCGCCACCGAGGCGGATGCGCTTTCGACCGCCTTTAGCCTGATGCCTGCGTCGCAGATTGGCGACATAGCGGCCACGCGGCCAGATGTGGCAAGTTCCGGGCTGATCAACCAATGGATGGAAATTTGCGCTTTTAACGGGCGCCTGAGAGGAGGAGTCGCCATAAGA
O07332_RHIME/2-310 GCCGCCGCCGCCGGCCTCCCCCTGCTGGACCTTCGCGGACGTGCCGAAGGC---GCAGTGGCAGCGGTGACGTGGAGAGGCCGCGCCCTGGGCGCGCCGGCGACACTGATTCTGAACCTAGAGAGCCAGGCA---GACGCCGCCGGGCTGGTGGACCGCGTCGTCGCA---GAGGTTGCGCGGCTGGAGAGGGTGTTCAGTCTGTACCAGCGCGATTCCGCGCTCGCCGAGCTGAACCGAACC---......GGAGCGATCGCCGCTCCGCCGCCGGATCTGGTGAATCTGCTCGAGGCTAGCCGTGACTTCTGGGAGACGACTGGTGGGGCCTTCGACCCTAGCGTCCAGCCTCTGTGGACGCTCTATGCCGAGCACTTTGCCGCCGGCGACGCCGATCCCGCGGGGCCGCCCGAGGCCGCAAAGAGGCGCGCATTGTCGCGCGTCGGCTTCGACAAGCTTGAGTTCAAC---.........---CGCGATCGCGTCGTATTCGCCCGA------CCGGGAATGGCGTTGACCCTCAACGGCATAGCGCAGGGCTACATCACCGACCGGATTGTCGGCCTGCTCAAGGACGCGGGTATTGCAAACAGCCTCGTCAGCATGGGC---GAGACACGCGCCATCGGGTCGCAACACGACGGCCGT........................CCGTGGCGGGTCGGACTTGCGACGCGAGAAGATGCC------AGCACGCCGGACAGCGTTCTGAATCTCGTCAACAGGGCCGTCGCGACCTCGAGCCCGGACGGTTTCCGATTCGACGACTCTGGCCGC---TTCGGCCACATTCTTGACCCCCTTAGCGGGAGAGCGCCAAGACTCCGC---------------CGGCGGGTCAGCGTCGTAGCTCCGACTGCGACGGCTGCCGACGCCTTCTCAACCGCCTTCAGCCTCATGGGCAGTTCG------------------GCTGTCCGC------ATCGCG---------------------------------TGCGAGCACCATTCGGAACTAACTGTTGACATGATCTCCACT
O33433_PARDE/8-288 CTGCTGACCGCCTGTGCCGCGCTGCCC---------GGCACGGCACGGGCC---GCGACCGAG------GAATGGCAGGGCCGCGCCATGGGGGCCGATGTCACGTTGCGGCTGCATGGCGCGAGCCCGGTG---CAGGCGCGCGGCTTCTTTGCCGAGGCGGCGCGG---CTGCTGGCCCATGTCGAGAACCTGTTCTCGCTGCATCGC---GATTCGGACCTCGTGCGGCTGAACCGCGAC---......GGGCGGCTGCGTTTTCCCGCCGCCGGCATGGTCGAGCTGCTGGCCCTGTCCGAACCGGCTGCACCGCCCACCGGCGGCGCATTCGACCCGACCGTGCAGCCGCTGTGGCTGGCGCGGGCGCGGGGCGAGGACGAG---------------------------------------GCCACGGCCCGCGCCCTGGCAGGCTGGCAGGCGGTCGACTGGTCG---.........---CAGGCCGAGGTCCGGCTGACCCGT------CCCGGCATGGCGCTGACCTTCAACGGCCTCGCGCAGGGCTGGGCCGCCGACCGGCTGGCCGAGGCGGCCGCGCGCCATGACCTGGCCGAGCTTCTGATCGACGCGGGC---GAGATCCGGGCGCTGGGCGTGCGG------------........................GACTGGCGCGTGGGGCTGGCCGAT------GCCGCG------GGGCGCGAGCACCGCCGCATCCGGTTGCGCGACCGTGCGGTGGCGACATCTTCGCCCGGCGGCACGCTGATCGGGCCGCATGGCCTG------CCGCATATCGTCGCACCGGGTGGCGGG---GTGCCGCTTTGGGAC------------------ACGATCTCGGTCAGTGCGGACAGCGCGGCGCTGGCGGACGGGCTTTCGACCGCGCTTTGCCTGATGCCGCCCAAG---------------GCCGCCTGCGCC---------GCG---------------------------------ATGGCACGTCTGCCGGGCTGCCGTATCGAGCTGGCGATCGCC
O68482_ACHCY/10-303 GCAATTTCTGCAGTTCTCGCAACGGCGCCCGCCATCGCCCACGCCAACGCG---GCAACCCGC------TTCTGGACAGGTCAGGCTCTTGGCGCGCGTGCCTCGATCCGCATTGCGCACCCC------------GAGGCCGGGACGATCGTCTCCAGGGTCATGGCG---GAGATCGACCGTCTGGAAAACATCCTTAGCCTCTACCGTGCCAACAGCGCGCTTTGCCGGTTGAACCGCGAC---......GGTCATCTTCAAGACCCGCCATTCGAGCTTTTGGAATGTCTGTCACTGGCCGACGCAGTCCACCTGGCTAGCGGCGGGCGCTTCGATCCGACGGTACAGCCGCTCTGGACGCTCTGGGCTCAATCGGCTGCAAAC------------GGCACGCGACCCGGCCCGGCGGACGTTGATCGCGTGCGTGGCAACGTCGGCTGGGGTAAGGTCAAGCTCGGT---.........---------GCAGCAGCGATCACGTTG---CATCCGGGCATGGCGCTGACGTTGAACGGCATCGGCCAGGGGTATGTCGCCGACCGCGTAGCAGCAATGCTTGAAGTCGAGGGACTGACGGACATTCTGATCGATACCGGC---GAGTTCCGTGCGCTCGGGGGACGACCGGGCGGCGGC........................GGATGGCCCGTCCGGCTG---------------------------GAAACAGGCGAGCGCCTGCCGCTGCGCCAGCGGGCGGTCGCCACCTCCGCCCCTCTCGGCACGACCTTCGATCAAGCAGCCAGA---GACGGACATATTCTCGACCCCCTGACCGGA---ATGCCCGCGCCAGCAAAC---------TGGCGCTCTGTCTCGGTGTCGGCATCATCCGCTGCCATCGCCGACGCGCTGGCGACGGCTGCATGCCTGCTGCCTGATGCCGGATCG---------ATCGTTGCGATG---------------------------------------------AACGCGCGTTTTGACGGCGTCCGCCTGGAAGCCGCCTCCGTT
RNFF_RHOCA/170-500 CTGGCGCTTGCGGCCGGGCTTGTCCTTGCGGGGGGCGTGCGGGTGCTGACCGCACCGGCCCCCGATGTATCCGAGACCTTTTACGTCTTCGGCACGCTGCTCGAGGTCGAAACCCATGGTGTCCCCGAGGCG------CAGGCCCGCGACGCGATGGCGGTGCTTGGCGCGCATTTCCGGCAGATGCACCGCGATTGGCACGCCTGGGCC---CCCGGTGAACTCGAAAGCCTGAATGCCGCGATGgccgccGGGCAAAGCTTCGAGGTCGATCCGGGGCTGGCAAAACTCTTGCAGCAGGGCAGGGACCTTGCCTGCCGCTCGGAGGGGCTGTTTGATCCCGCCGTGGGCGGCATGGTCGAGGCCTGGGGCTTTCACGCCGACACC---------CCGCCCGAGGCGATCCGCTCTGACGCGGTGGTGGCGAAGCTTCTGGCGGGCGCTCCGAAAATGACCGATCTGACG---.........---ATCACCGGAACGACGGTCCGCTCGTCGAACCCCGCGGTGCAGCTGGATCTGGGCGCCTATGCCAAGGGCGCGGCGCTGGACTTGGCCGAGGCGGACCTGACCGCCGCGGGCATCCGTGATGCGGTGCTGAACGCGGGCGGCGGCGTGCAGGTTCTGGGCGATCACGGGTCGCGG---........................CCCTGGCGGGTGGCGATCCGCGATCCG------TTCGAATGGGGCGTCGTCGGCGCGGTGTCGCTGCGGCCGGGCGAGGCTTTGCACACTTCGGGCAATTACGAACGCTACTTCGACAGGGGCGGCATCCGCTTTTCCCATATCATCGATCCCCGCACCGCA---AGGCCGATGCGGGGG------------GTGGTCTCGGTCTCGGTCCTGTCCGACAATGGCGCGCTCTCGGATGCCGCCGCCACCGCGCTTTGCGTCGCGGGCGAAGAGGACTGGCCGCGGATCGCCGCGCAGATGGGGGTCCGCGCCGTGCTCAGGATCACCGATGACGGATCGATCTTCGCCACCCCCGAGATGAGGGCGCGACTCGAAGCGGTCGAGGGC
APBE_CHLPN/4-313 TTACCAAAATTTTTCTTAGTTCTTTTATGTCTTGGACTCTGTTCATGCTCT---CAAAAAACG---ACAACAATCGAAGGAGAGCAGATGACAATCTTCTATCGCATTGTTCTGGGAACCTCTTTATCCGCA---AAAGAAAAAGCATCTTTATCCCAACAAATTGATAGATGCTTTCATAAGATCGACTCGATTTATAACAACTGGAATCCCTATTCTGAACTCTCGATAATCAACCGAGCTCCA...gcaGATGTCCCCATAACTTTATCTGTAGAACTTTCCGAGTTTCTAGATCAGGTAGATACACTTTACAAACTTTCAGAAGGACGTTTTGACCCTACTGTAGGACCTTTAAAAACCCTATGGCTTCTACATCTCAAAAGT------------CAAACCCTCCCCCCTAAAGACGTTTGGGAACAACATTATAAAGACATGGGCTGGCAACACTTGGAGTTTCAG---.........---TCAAACACAAAAACTCTAATCAAAAAGAATCCTCATGTTCAAATCGACCTCTGTGGTGTTGTCAAAGGTTATGCCGTAGAT---TGTCTAAATGAAATTTGCAATACCTTTTGTCCGAACAACTATGTAGAGTGGGGAGGAGAGATCAAAACGTCAGGGCATCATCCCTCGGGAAGA........................CCTTGGCGTATTTTTTCT------------------------GAAGCAGCAGGTACGATCTTAGATATCGATGATATGGCAATTGCAACAAGTGGAAATCATATTCAAAAATGGTGTGTTGAAGGAAAAATTTACACCCATATTCTTGATACTCGTACAGGG---AAACCCCTAGAGCTAAGCTCCTATCCTATCCAAAGTGTTTCAGTAGTCCATCCGAGCTGCGCATACGCCGACGCTATTGCCACAGTCCTCATGACTTTTGATTCTAAAATA------------GAAGCAAAACAG------TGGGCT---------------------------------GAAGAACACCATATCCTAACCTATATCAATGATGGCGCCTCT
APBE_CHLTR/5-315 TTTGCGTCATACCTCCTGATCCTAGCCCCCTTCTTCCTCCAATCCTGTTCA---GCTCCTTCAAGAACTACTCTTGAAGGGGTCCGTATGACAATTCCTTATCGCATTGTATTTGGAGAAGCACTTTCTCCA---GATGCATTCCAACAAGCGCAAAAGGAAATTGATCGAGTGTTTGATCATATCGATCAAACTTTTAATAATTGGAATCCTCTATCCGAAATTTCCCGTATTAATCGCACCACA...aaaCAAACCCCTATCCCCTTATCGCCAGCACTCTTTGCTTTTCTATGCGAAATAGACCATTTCCACGCCTTCTCTGATGGCCGTTTTGATCCCACCTTAGGCGCTTTAAAAAGCTTATGGCTACTGCACCTAAAATCC------------CATACCATCCCTTCTCAAGAGCTCCAACACCTCTACAAACACAGCTCTGGATGGCATCTGATTTCTCTTGAT---.........---AAAACCCAGCAAACTTTAAGGAAACTTTCGCCTCTCGTCCAATTAGATCTCTGCGGAACTGTAAAAGGTTTTGCTGTAGAT---CTATTAGGAACAGCTTGTGCTCAATTCTGTCAAAATTACTACGTAGAATGGGGAGGAGAAATCAAAACCAAAGGGAAACATCCTTCCGGAAGA........................TCTTGGGCTGTCGCTTCA------------------------TCAGCTACCCCAGAGATTCTTCATCTGCATGATCATGCTATAGCGACGAGCGGGAGTCAATATCAACGATGGCATGTGGACAACAAAACCTACACCCACATTCTTGACCCATTAACGGGA---ACTCCTCTAGAAGATAGCAGCCATCCCATCCTTGCAGTTTCCGTGATCAACGAAAGCTGCGCCTTTGCGGATGCTATGGCTACTGCACTGACGACCTTCTCCTCTAAACAA------------GAAGCTCTTGAC------TGGGCA---------------------------------AATAAGAAACATCTTTGCGCATATATTACCGATAAGAACGTT
APBE_BUCAP/7-323 TTTAATGTTTTTTTTTTGTTTATAATTTTTTTTACAATTTTACATAAAAATGAAGAAAAAAAATCTATAAAATTGAAAGGAAAAACTATGGGTACATATTGGCAAGTTAAAATTCCATATGTACCA---------AATCAATTACATATAAAAAATTTAATACAAAGA---AAATTAGATGAAGATGAAAAATTATTATCTTCTTGGAAAAAAAATTCTTTAGTATCTAAATTTAATAAACTAAAA...aaaAACCAACTATTAGCTATTGATAAAAAATTCTTTAAAATTATTTCAATAGCATTAAAAATAAATAAAAAAACTTATGGAAAACTAGATATTACAATTGGCAATCTAATTAATATATGGGGATTTGGTAATCAAAAA------AAACCACATAACTATCCTTCTATTAATAAAATAAAACAAGTTATGGCTCTTACCGGAATGAAACACTTAAGTTTAATTAGC.........AATGCTAATAAACATTACATCAAAAAAAATATAGATGGCATGAAAATTAATCTTTCTACATTAGGAGAAGGATTTGCAGCAGATCATCTTTCCTCAGTTCTCAAAAAAGAAGGAATAGAAAATTATACTATTTCAATAGGAGGTACAGTATTAGTTAAAATAAAAAATAAAGAAAAT---........................TCTAAAATTATTGCAATTCAAAAACCTACTGATAAA---ATACAATCAATTCATTTATTAATTCACTTAAAAAACAAATCTATTAGTACAGCTGGTACATATCGCAATTATTATTATTTAAAAGGCAAAAAAATTTCACATTTAATCGATCCTAAAACAGGA---ATGCCTGTAACGCACAAC---------TTAATATCAGTAAGTGTAATTTCATCAACTGCTTTAGAAGCTGATGGTTGGGATAGCGCATTACTTATTTTAGGTTTTAAAAAA---GCTAAAATATTAGCATTAAGA------------------------------------------------GAAAATCTTGCAGTTTGTCTTATAACTAAAAAAAATAAT
APBE_ECOLI/13-332 GCCGCGCTCTTCTTTGTTGGTTGCGATCAAAAACCACAACCCGCCAAAACCCACGCTACTGAAGTTACCGTTCTTGAAGGCAAAACTATGGGTACCTTCTGGCGTGCCAGCATCCCGGGCATTGACGCCAAA---CGCAGCGCCGAACTTAAAGAAAAGATTCAGACC---CAACTGGACGCCGACGATCAGCTGCTTTCGACCTATAAAAAAGATTCCGCGCTGATGCGCTTTAACGACTCGCAA...agtTTATCGCCGTGGCCGGTAAGTGAAGCGATGGCCGATATCGTCACCACCTCGCTGCGCATTGGCGCGAAGACCGATGGCGCGATGGATATAACCGTCGGGCCGCTGGTGAATCTGTGGGGCTTTGGCCCGGAACAA------CAGCCGGTTCAAATTCCGAGCCAGGAACAGATCGATGCGATGAAAGCCAAAACCGGCTTACAGCACCTGACGGTCATCAAT.........CAGTCGCATCAGCAATATCTGCAAAAAGACCTGCCGGATTTATATGTCGATCTCTCCACCGTCGGCGAAGGCTATGCGGCCGATCATTTGGCACGCTTGATGGAGCAGGAAGGGATTTCCCGCTATCTGGTGTCGGTGGGCGGCGCGCTGAACAGCCGTGGTATGAACGGTGAAGGCCTG........................CCGTGGCGGGTAGCGATTCAAAAACCAACCGATAAA---GAAAACGCGGTTCAGGCTGTGGTGGATATCAACGGTCATGGGATTAGCACCTCTGGCAGCTACCGTAACTATTACGAACTGGACGGCAAACGTCTTTCCCATGTTATCGATCCGCAAACCGGG---CGTCCCATCGAACACAAT---------CTGGTATCCGTGACGGTGATTGCTCCGACGGCGCTGGAAGCCGATGCCTGGGATACTGGCTTGATGGTACTCGGGCCGGAGAAA------GCTAAAGAGGTTGTTCGC---------------------------------------------CGGGAAGGGCTGGCGGTTTATATGATCACCAAAGAAGGCGAT
APBE_HAEIN/5-328 ATAAGCGGTATCATAGCGGTAGCAATGGCATTAAGTCTTGCTGCTTGTCAAAAAGAAACAAAAGTTATCTCTTTAAGCGGTAAAACAATGGGGACAACTTATCATGTTAAATACCTTGATGATGGTTCAATAACAGCAACATCTGAAAAGACGCATGAAGAAATTGAAGCAATCTTAAAAGATGTAAACGCGAAAATGTCCACTTACAAAAAAGATTCGGAATTGAGCCGCTTCAATCAAAATACCcaagtgAACACACCGATTGAGATTTCAGCAGATTTTGCCAAAGTATTAGCTGAAGCGATTCGTTTAAATAAAGTGACCGAAGGCGCGTTGGATGTAACTGTTGGCCCTGTCGTGAATTTATGGGGATTTGGTCCTGAAAAA------CGCCCCGAAAAGCAACCTACACCAGAACAATTAGCTGAACGCCAAGCGTGGGTTGGCATTGATAAAATTACCCTAGATACT.........AACAAAGAAAAAGCTACATTAAGTAAAGCACTTCCTCAAGTTTACGTAGATTTATCGTCAATTGCTAAAGGCTTTGGCGTTGATCAGGTGGCTGAAAAGTTAGAACAATTAAATGCTCAGAATTACATGGTTGAAATCGGCGGTGAAATTCGTGCGAAAGGAAAAAATATTGAAGGTAAA........................CCTTGGCAGATTGCCATTGAAAAACCAACTACAACAGGCGAAAGAGCGGTTGAAGCGGTCATTGGATTAAACAATATGGGAATGGCAAGTTCTGGCGATTACCGTATTTACTTTGAAGAAAATGGCAAACGCTTTGCGCACGAAATTGATCCGAAAACAGGT---TATCCAATTCAGCATCAT---------TTAGCCTCAATTACGGTACTTGCACCAACCTCAATGACTGCAGATGGCTTATCTACAGGGTTATTTGTGCTGGGGGAAGACAAG------GCGTTAGAAGTGGCTGAG---------------------------------------------AAAAATAATCTTGCCGTTTATTTAATCATTAGAACAGATAAT
O67299_AQUAE/1-271 TTGATACTAATACTCCTTTTCCTCCTCATAAACTTCCTCTTTGCGGAAAGA------------------------GTTTTTTACCTTATGGGAACTTATCTGATTCTGGACGAACTCCGCGGA------------------AAA---------GAAGTAGCAGTTTACAAATACATGAAAAAGCTGGAAGAGAAGCTCTCTCACTTTATACCGGACTCTGAAATTTCCCGAATAAACGAGAACGCTgga...ATAAAACCCGTAAAAGTTTCCAAAGAAACTTATGAAATTCTGAAAATATCTAAGGAAATAGCAGAAAAAACTTACGGATACTTTGACCCAACCGTAGGAAGTTACACGGTAAACTTTAAAATGAAAAAATTAATT---------------------------------TCCGAGAAAAAAGCGAAATCCTTAATAAATTTCAAAGATTTAATACTCTTTCCT.........---GAAGAAAGAAAAGTTTTTTTAAGG---AAAAAGTATATGGCTCTTGACCTCGGCGGTATAGGTAAAGGTTTTGCAGTTCAG---------AAGGCTTACGAATACATAAAAACGGAGAAGGGATTTATAGCCCTTGCGGGCGATATGAAAGTTTGGGGACACAAAAGAAAA------........................------------------------------------------CTCGCGGTTTACAATCCGATAAACGGAAAAATCCTCGCGGAAGGTGTAAACAAAAAAGATTTGTGTCTCTCTACCTCTGGAAATTACTTCAGGAAACACATCTTGGGAAAAAGTAAAAGA------------------------------GTATTACAGATTACGGTGGCTCACGAGAACTGCACCGTAGCGGACGCTCTCGCAACCGCCCTCTTCGCCTCTCCAGAAAAGGAA------AGAGAGAAAATTCTGAAAAAC------------------------------------------TTTCCAGAAGCCGCTGTTCTCATTCTCTACACAGACGGAAGC