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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF02388 alignment
(11 sequences with 443 aa)


Q9ZNI0_STAAU/6-413 LSEEEFTNYTKKH--FKHYTQSIELYNYRNKINHEAHIVGVKNDKNEVIAACLLTEARIFKFYKYFYSHRGPLLDYFDAKLVCYFFKELSKFIYKNRGVF-ILVDPYLIENLRDANGRIIKNYN-NSVIVKMLGKIG------YLHQGYTTGYSN----------KSQIRWISVLDLKDKDENQLLKEMEYQTRR----NIKKTIEIGVKVEDLSIEETNRFYKLFQMAEEKHGFHFMNEDYFKRMQEIYKDKAMLKIACINLNEYQDKLKIQLLKIENEMMTVNRALNENPNSKKNKSKLNQLNMQLSSINNRISKTEELIFEDGP-----------VLDLAAALFICTDDEVYYLSSGSNPKYNQYMGAYHLQWHMIKYAKSHNINRYNFYGITGVFSNEADDFGVQQFKKGFNAHVEELIGDFIKPVRPILYKFAKLIYK
O33609_STACP/6-413 LSKTEFQNFVNSH--FSHYTQSNQHFDYRNKFQNDVHLVGVKDNVGTVIAACLLTEAQALKVFKYFYTHRGPVLDFKNFELVRFFYKNLTRYLKKNRGLF-VLTDPYTLENIRNAQGEILTSYD-NRPLIKTLKNIG------YKHQGYSIGYSQ----------TSQIRWLSVLDLNNKNTDMLLSEMDYQTRR----NIKKTYEMNVQVRTLSIEETSRFFKLFKMAEEKHGFKFRNQDYFEKMQKIYNDNSMLKLAYINLSDLLEKQNNKITQLNKQYEEIINALKANPNSKKNKNKANQINQQISAQNRKINETKELIKTDGK-----------IIDLAAAFYIYNNDEVYYLSSGSNPKYNAYMGAYRLQWEMIKFAKQNNIPRYNFYGITGDFSETAEDYGVQRFKEGFNAYVEEYIGDFIKPLRPFIYKIYTLLKR
O05989_STASI/6-413 LNIQEFEEFVFQK--MSHYTQSASHFEYRNNHQNNVHLVGVKNETGEVLAACLLTEARCLKFFKYFYTHRGPVMNFKDHELVRFFYENLTTYLKKQNCLY-VLTDPYLLENIRSCDGEILESYD-NETFMNVMNLLG------YRHQGFTTGYSQ----------TSQIRWLSVLNLENKDEKQLLKEMDYQTRR----NIKKTYEMQVKVRDLSINETDRFFKLFKMAEEKHGFKFREQSYFERMQKTYADNSMLKLAYIDLEELLETQNAKVAELNTDIENIQAALKENPNSKKNKNKYAQYQKQLAAQERKITETKKLIETDGP-----------VLDLAAAYYIYTPHEVYYLSSGSNPKYNAYMGAYRLQWEMIQFAKNKGINRYNFYGITGDFSEDAEDFGVQKFKEGFNAHVEEYVGDFIKPIKPLFYKIHQLLNR
Q9ZFG7_STAHA/6-414 LTATEFGNYTDKMP-YSHFTQMTENYEMKVANKTETHLVGIKNKDNEVIAACMLTAVPVMKFFKYFYSNRGPVIDYDNRELVHFFFNELTKYLKQHNCLY-VRVDPYLPYQYLNHDGEITGNAG-NDWFFDKMKHLG------FEHEGFTKGFDP----------IKQIRYHSVLDLKNKTSKDILNGMDSLRKR----NTKKVQKNGVKVKFLSEEELPIFRSFMEDTTETKEFQDRDDSFYYNRYRHFKDHVLVPLAYIKFDEYIEELQNERETLNKDVNKALKDIEKRPDNKKAFNKKENLEKQLDANQQKLDEAKKLQAEHGN-----------ELPISAGFFFINPFEVVYYAGGTSNKYRHFAGSYAIQWTMINYAIDHGIDRYNFYGISGNFSEDAEDVGVIKFKKGFNADVIEYVGDFVKPINKPLYSVYKTLKK
FEMA_STAAW/19-427 LTAKEFGAFTDSMP-YSHFTQTVGHYELKLAEGYETHLVGIKNNNNEVIAACLLTAVPVMKVFKYFYSNRGPVIDYENQELVHFFFNELSKYVKKHRCLY-LHIDPYLPYQYLNHDGEITGNAG-NDWFFDKMSNLG------FEHTGFHKGFDP----------VLQIRYHSVLDLKDKTADDIIKNMDGLRKR----NTKKVKKNGVKVRFLSEEELPIFRSFMEDTSESKAFADRDDKFYYNRLKYYKDRVLVPLAYINFDEYIKELNEERDILNKDLNKALKDIEKRPENKKAHNKRDNLQQQLDANEQKIEEGKRLQEEHGN-----------ELPISAGFFFINPFEVVYYAGGTSNAFRHFAGSYAVQWEMINYALNHGIDRYNFYGVSGKFTEDAEDAGVVKFKKGYNAEIIEYVGDFIKPINKPVYAAYTALKK
Q9ZFG2_9STAP/6-414 LTTAEFGAFTDQMP-YSHFTQMVGNYELKVAEGVETHLVGIKDNNNNVLAACLLTAVPVMKFFKYFYSNRGPVMDYENKELVHFFFNELSKYVKKYHALY-LRVDPYLPMLKRNHDGEVIERYG-SDWFFDKMAELN------FEHEGFTTGFDT----------IRQIRFHSVLDVENKTSKDILNQMDNLRKR----NTKKVQKNGVKVRYLNEDELHIFRSFMEDTSETKDFVDRDDDFYYHRMKYYKDRVRVPLAYIDFNAYLAELNTEAQDFKKEIAKADKDIDKRPENQKAINKKKNLEQQLEANQAKIKEAETLQLKHGD-----------TLPISAGFFIINPFEVVYYAGGTANEFRHFAGSYAVQWEMINYAIDYQIPRYNFYGISGDFSEDAEDAGVIKFKKGYNAEVIEYVGDFIKPINKPAYTVYLKLKQ
Q9ZFG3_9STAP/6-413 LTTLEFEAFTNKMP-YAHFTQAVGNYELKTSEGTSTHLVGVKDNQGEVLAACLLTSVPVMKKFNYFYSNRGPVMDYDNKELVDFFFKEIVSYLKSYKGLF-FRIDPYLPYQLRDHDGNIKKSFN-RDGLIKQFESLG------YEHQGFTTGFHP----------IHQIRWHSVLDLESMDEKTLIKNMDSLRKR----NTKKVQKNGVKVRFLSKDEMPIFRQFMEDTTEKKDFNDRGDDFYYNRLKYFEN-VKIPLAYIDFETYIPQLEKEHEQYNKDIAKAEKDLEKKPDNQKTINKIDNLKQQREANEAKLEEALQLQQEHGD-----------TLPIAAGFFIINPFEVVYYAGGSSNEYRHFAGSYAIQWEMIKYALDHNIDRYNFYGISGDFSEDAPDVGVIKFKKGYNADVYEYIGDFVKPINKPAYKAYTTLKK
FEMB_STAAM/6-412 LTVTEFDNFVQNPSLESHYFQVKENIVTRENDGFEVVLLGIKDDNNKVIAASLFSKIPTMGSYVY-YSNRGPVMDFSDLGLVDYYLKELDKYLQQHQCLY-VKLDPYWLYHLYDKDIVPFEGREKNDALVNLFKSHG------YEHHGFTTEYDT----------SSQVRWMGVLNLEGKTPETLKKTFDSQRKR----NINKAINYGVKVRFLERDEFNLFLDLYRETEERAGFVSKTDDYFYNFIDTYGDKVLVPLAYIDLDEYVLKLQQE---LNDKENRRDQMMAKENKSDKQMKKIAELDKQIDHDQHELLNASELSKTDGP-----------ILNLASGVYFANAYEVNYFSGGSSEKYNQFMGPYMMHWFMINYCFDNGYDRYNFYGLSGDFTENSEDYGVYRFKRGFNVQIEELIGDFYKPIHKVKYWLFTTLDK
P74894_9STRE/6-406 IDALTFEKFANTQK-RRSFEQTIEMGNLRKSRNFDVKYFALFHLEEIKVVALTYTQKIFGGLNMG--IYYGPIFSEE--RYLAHFLIELKKYTKKNNVLE-LDIFPYDDYQYYDDEGRLIQDGN--IELRDIFEKAG------FTYQGDEVGFN-----------SEQVTWHYVKDLTNLTSENLLNSFSKKGRP----LVKKSNTFGIKVRKLNKDELQIFANITNDTATRRGYNDKGLEYYEKFFDAFKDKSEFTIATLNFREYLGNILDGRHRLENKISILGTRLDKNPNSEKIKNQLRELNSQRETFLIREEEAKSFVKKYGDE----------DVVLAGSLFVYTQQELVYLYSGSYVEFNKFYAPALLQEYAMLNALKKGIKFYNMLGITGKFDNSD---GVLCFKQNFKGYIVRKFSNFIYYPNPRKLKVIQLIKS
O51533_BORBU/1-334 MTIKKIKTKEMEEN----YLQSELWALIKTTKNSYWKAIAFESD---VLGKIVVMQR---RLFKNFYLAYIPHPEFSNKTLENINIDKISKSIKEFS----IKIKPYLHKNTIFLRFDLMYYYQ--RTLNDKYSPLK------TKIKYLKKSFD-----------DIQPANTTILNLNNSLEEILLNMKKKTRYN----IKLSTKKNLNIIIDDKFKHLSEFYKLYKETSKRDKFTIHSEEYIQNLIQIFKQ------------------------DK-----------------------N-------------AQIKLIIAFYNN------------IIISGIIVGIYKEKAVYLYGASSKEYRNLMPNYAVQFKAIEMLKKLEIKEYDLLGIPPIANKNHPLYGLFSFKTGFGGNIIHRIGCYDFTYKNFIYKIYANLEK
O83784_TREPA/19-461 RIPLHTERTGSARQVMELFGRYLDPVHGEQYNGCPMFVVTVQKWTQETWTAETFLQSPAWAHFKRAYGWQTYVFSVHVRPDANTGGEKHFPLLILCKNIKPFGVFAYAPGAPPYLQDDQIPSRQMARARASLLRELTSALLPFFVRKPFLVRFDPPWGWAAAVCSLPSLASSSTHCAVGTEMELFTRELHACGLRRAACNVQPQDTLLLDMRPAREDIFAAFKPKWRYNVRRAQKHGVRVARFDTLAQEGSPGSLRAAVDVFYALYQKTAARDRIAIHTRQYYRDFCTAFAAQGMLVLCLAYAPRAALRVRIAGKDTPKNIETPHPPASEDRELGCADEQAIAALVLLCFDTCATYVYGASDYSARHLMAPYALQWYAIQEARARGCLWYDFYGIPPTDDVRHPMHGLYRFKTGFGGFVFHRVGSVDMPVRQLHAAAYACAER