PANDIT Home | Browse PANDIT | Help on PANDIT | Release notes | Pfam
 pan•dit |
PANDIT Protein and Associated NucleotideDomains with Inferred Trees |
PF02353 alignment |
| YLP3_PSEPU/98-376 | CATGACAAGCGCACTGACGCCGAAGCCATCTCTTACCACTATGACGTATCCAACGCCTTCTACCAGTTGTGGCTGGATCAGGATATGGCCTATTCCTGTGCCTACTTCCGTGAA---------------------CCGGACAACACGCTCGACCAGGCGCAGCAGGATAAATTCGATCACCTGTGCCGCAAGCTGCGGCTGAATGCCGGTGACTACCTGCTAGACGTTGGGTGTGGTTGGGGTGGGCTTGCGCGTTTTGCAGCACGCGAATATGACGCCAAGGTGTTCGGTATTACCCTGAGCAAGGAGCAGCTCAAGCTCGGCCGGCAGCGTGTCAAAGCCGAGGGCTTGACCGACAAAGTGGACCTGCAGATTCTCGATTACCGCGATTTGCCTCAAGATGGT---CGCTTCGACAAAGTGGTCAGCGTGGGCATGTTCGAGCATGTC.....................GGGCATGCCAACCTGGCGCTGTATTGCCAGAAACTGTTCGGTGCTGTCAGGGAAGGCGGGCTGGTGATGAACCACGGTATCACCGCCAAACACGTCGATGGCCGTCCGGTAGGGCGGGGTGCAGGT------------------------GAGTTCATCGACCGTTATGTATTCCCCCACGGCGAGCTCCCTCATTTGTCGATGATCAGCGCC---AGTATCTGTGAAGCGGGGCTGGAGGTGGTAGACGTGGAAAGCCTGCGTCTGCACTACGCCAAGACCTTGCACCACTGGAGCGAAAACCTGGAGAACCAGTTGCACAAAGCCGCGGCGCTG---GTGCCGGAAAAAACCCTGCGTATCTGGCGCCTCTACCTTGCAGGCTGTGCCTATGCGTTTGAGAAAGGCTGGATCAACCTGCACCAGATTTTGGCAGTTAAG |
| O69515_MYCLE/149-422 | CACAGCAAGACTCGTGACGCCGAGGCCATCCGCCATCACTACGACGTTTCCAACCGGTTCTACGAATGGGTGCTCGGACCCTCAATGACATACACTTGCGCAGTTTATCCGAAT---------------------GCCGAAGCGACGTTAGAGGAGGCACAGGAGAACAAATACAGGCTGATTTTCGAGAAGCTGCGGCTGCAGCCCGGTGACAGGCTGCTCGATGTCGGCTGCGGCTGGGGCGGCATGGTGCGCTACGCCGCCCGCCGC---GGGGTCCGGGTCATCGGTGCGACGCTGTCAGCCGAACAAGCGAAGTGGGCTCGGAAAGCGATTGACAACGAAGGGTTGGCAGAGATAGCACAAGTGCGGTATTCCGACTATCGTGACATACGAGAGACG------GAATTCGACGCCGTTTCGTCAATCGGACTGACCGAGCACATC.....................GGTGTCAAGAATTACCCCGCCTACTTCAACTTTCTGAAGTTGAAGTTGCGCACTGGCGGCTTGCTACTTAATCACTGCATAACCCGACGCGACAACAAGTCGACCTCCTTTGCCGGT---------------------------------GGATTTACCGACCGTTACGTCTTCCCCGACGGGGAGCTAACAGGCTCGGGACGCATTACCACC---GAAATCCAAGAGGTCGGTTTAGAAGTGCTGCACGAAGAGAACTTCCGCCATCACTACGCGATGACACTGCGCGACTGGTGCCACAACCTGGTCGAGCATTGGGAAGACGCCGTTGCCGAA---GTCGGCCTACCCATAGCCAAGGTCTGGGGTTTGTATATGGCGGCGTCGCGTGTGGCTTTTGAACAAAACAACCTCCAGCTGCATCACATACTGGCGACAAAG |
| O25171_HELPY/100-374 | CAAAAACCCATCAAAGAAAGCTCCAACATTTCTAAACATTACGATCTGGGGAATGACTTTTATTCTATCTGGTTGGATGAAACCTTAAGCTATTCATGCGCGTATTTCAAAAAA---------------------GACGATGACACCCTCCATGCCGCCCAACTCCAAAAATTAGATCACACTTTAAAAAAGCTCCACCTAAAGCCTGGCGAAAAACTGCTAGATATAGGCTGTGGTTGGGGCTATCTCTCTGTAAAAGCCGCGCAAGAATACGGGGCGGAAGTGATGGGGATCACCATTTCTAGCGAGCAATACAAACAGGCTAACAAACGAGTCCAAGAGCTGGGGTTAGAGGATAAAGTAACGATCAAGTTATTGAATTACCAGGATTTAGACGGGCGCTTATACCGCTTTGATAAGGTGGTGAGCGTGGGCATGTTTGAGCATGTG.....................GGTAAGGATAATTTGCCCTTTTATTTCAAAAAAGTTAAAGAAGTGTTAAAGAGAGGCGGGATGTTTTTGCTCCACTCCATTTTATGCTGTTTTGAAGGCAAGACTAAC------------------------------------------GCATGGGTGGATAAATACATTTTTCCAGGTGGTTATTTGCCCTCTTTAAGAGAAGTGATGAGC---GTGATGAGCGAATGCGACTTCCACTTGCTCATGGCTGAAAGCTTACGCATCCATTACGCTAAGACTTTAGACATTTGGCGAAACAATTTCAACCACAATCTAGACCAAGTGAAAAGACTCAGCTATGACGAACGCTTTATCCGCATGTGGGATCTGTATTTAAGGACTTGCGCATCCGCCTTTAGGGTGGGGAGCGCGGATTTATTCCAATTGCTTTTAACCAAC |
| O67624_AQUAE/105-378 | TTCAGGACTATTAGAGATGAAAGGAATGTAAAGCACCACTACGACCTTGGAAATGACTTTTACAGGCTCTGGCTTGACAAGAGCATGACTTATTCTTGTGCTTTTTTTGAAGAT---------------------CCTAGCATGAGTATAGATGAAGCCCAAAGCTTAAAGAGGAGGATAATTTACGAAAAGCTTCAATTAAAAGAAGGAGACACGCTCTTGGACATAGGTTGTGGTTGGGGTTCAATAATCCTCGAGAGTGCGGAGCTGTACAACGTAAAGAGTGTTGGGATTACCCTTTCGGACAACCAGTACGAGTACGTCAAGGAGGAAATAAAGAAAAGGGGACTTCAGGACAAAGTCGAGGTTTACAAATTGCACTATGTAGATCTTCCCAAACTCGGAAGGAAATTCAACAAGGTGGTTTCCGTAGGCATGTTTGAACACGTT.....................GGCAAGGAAAATTACGAAACCTTTTTCAATACCGTTTACAAGGTAATGGAGGAAGGAGGACTTTTCCTACTTCACACTATAGGCAAGCTCCATCCGGACACCCAGAGC------------------------------------------AGGTGGATAAGGAAGTACATATTCCCCGGCGGATATCTCCCGTCCATTTCCGAAATTGTGGAA---AGTTTTAGAGATATGGACTTTACGTTAATTGACTTTGATAACTGGCGTATGCATTACTACTGGACGCTTAAAAAGTGGAAGGAACGCTTTTACGAGAACTTAGACAAAATTAGGAATATG---TTTGACGACAGGTTTATAAGAATGTGGGAGCTTTACCTTACCGCTTCCGCTGTTTCATTCCTGATAGGTTCTAACTACGTATTTCAGATACTCCTCTCAAAA |
| CFA_ECOLI/106-371 | CAGAGTAAAAAACGTGCCTGGATAGTCGGCAAAGAGCATTACGATTTGGGTAATGACTTGTTCAGCCGCATGCTTGATCCCTTCATGCAATATTCCTGCGCTTACTGGAAAGAT---------------------GCCGAT---AATCTGGAATCTGCCCAGCAGGCGAAGCTCAAAATGATTTGTGAAAAATTGCAGTTAAAACCAGGGATGCGCGTACTGGATATTGGCTGCGGCTGGGGCGGACTGGCACACTACATGGCATCTAATTATGACGTAAGCGTGGTGGGCGTCACCATTTCTGCCGAACAGCAAAAAATGGCTCAGGAACGCTGTGAAGGCCTGGAT------------GTCACCATTTTGCTGCAAGATTATCGTGACCTGAACGAC---------CAGTTTGATCGTATTGTTTCTGTGGGGATGTTCGAGCACGTC.....................GGACCGAAAAATTACGATACCTATTTTGCGGTGGTGGATCGTAATTTGAAACCGGAAGGCATATTCCTGCTCCATACTATCGGTTCGAAAAAAACCGATCTGAATGTTGAT---------------------------------------CCCTGGATTAATAAATATATTTTTCCGAACGGTTGCCTGCCCTCTGTACGCCAGATTGCTCAG------TCCAGCGAACCCCACTTTGTGATGGAAGACTGGCATAACTTCGGTGCTGATTACGATACTACGTTGATGGCGTGGTATGAACGATTCCTCGCCGCATGGCCAGAAATTGCGGATAAC---TATAGTGAACGCTTTAAACGAATGTTTACCTATTATCTGAATGCCTGTGCAGGTGCTTTCCGCGCCCGTGATATTCAGCTCTGGCAGGTCGTGTTCTCACGC |
| O53732_MYCTU/140-423 | CACAGCCGAGATCAGGCCCGGCGCAATATAGCCGTGCACTATGACCTGTCGAACGACCTGTTCGCCGCGTTTCTCGACGAGACCATGACGTATTCGTGCGCAATGTTCACCGACCTGCTGGCCCAGCCAACTCCCGCCTGGACCGAGTTGGCCGCAGCCCAACGCCGCAAGATCGACCGGCTGCTCGACGTGGCCGGGGTCCAGCAGGGCAGCCACGTTCTCGAGATCGGCACCGGATGGGGCGAGCTGTGCATTCGCGCGGCCGCACGG---GGGGCCCACATCCGCTCGGTGACCCTATCGGTGGAGCAGCAACGGCTGGCTCGGCAGCGGGTCGCCGCGGCCGGCTTTGGCCACCGGGTAGAGATCGACTTGTGCGACTACCGCGACGTCGACGGG---------CAGTATGACTCAGTAGTCTCAGTCGAGATGATCGAGGCGGTG.....................GGATACCGTTCGTGGCCACGGTACTTCGCCGCGCTAGAACAGTTGGTGCGCCCGGGTGGCCCGGTAGCGATTCAAGCGATCACCATGCCGCACCACCGAATGCTGGCCACCCGCCACACCCAG---------------------------ACCTGGATCCAGAAGTACATCTTCCCTGGCGGACTGCTACCGTCCACGCAGGCCATCATCGACATCACCGGGCAACACACCGGGCTGCGCATCGTCGACGCGGCCTCGCTGCGACCGCATTACGCCGAGACGCTGCGGCTCTGGCGGGAACGATTTATGCAGCGGCGAGATGGGCTGGCGCATTTAGGTTTCGACGAGGTGTTTGCACGGATGTGGGAGCTGTACCTGGCGTACTCGGAGGCGGGCTTCCGGTCGGGCTATCTGGACGTCTACCAGTGGACGTTGATCCGC |
| MMA1_MYCTU/2-286 | GCCAAGCTGAGACCATATTACGAAGAGTCACAGTCGGCTTACGACATTTCGGATGACTTCTTCGCGTTGTTCCTCGATCCCACCTGGGTCTACACCTGCGCCTATTTCGAGCGT---------------------GACGATATGACGCTGGAAGAGGCGCAACTGGCCAAGGTGGATCTGGCGTTGGACAAGCTGAACCTCGAACCGGGGATGACGCTACTCGACGTGGGTTGCGGGTGGGGCGGGGCGCTCGTTCGGGCCGTGGAGAAGTACGACGTCAATGTCATCGGCCTCACGCTCAGCCGGAATCACTATGAACGCAGCAAAGACCGCCTGGCCGCAATCGGAACGCAACGGCGCGCCGAGGCCCGGCTGCAGGGCTGGGAAGAGTTTGAAGAG---------AACGTCGACCGGATCGTCAGCTTTGAGGCATTCGACGCGTTC.....................AAAAAGGAGCGGTATCTGACGTTCTTCGAACGCTCCTACGACATCCTGCCCGATGACGGGCGGATGCTACTGCACAGCCTGTTCACCTACGACCGCAGGTGGCTGCACGAACAGGGCATTGCGCTGACGATGAGCGACCTTCGATTCCTCAAATTCCTGCGGGAGTCGATCTTCCCGGGCGGCGAGCTGCCATCGGAGCCCGACATTGTCGAC---AATGCGCAGGCCGCGGGCTTCACCATCGAGCATGTCCAGCTGCTGCAGCAGCACTACGCACGGACTCTCGATGCATGGGCCGCCAACCTACAGGCTGCCCGCGAACGCGCCATCGCCGTA---CAGTCCGAAGAGGTCTACAACAACTTCATGCACTATCTGACCGGATGCGCGGAGCGCTTCCGCAGAGGCCTAATCAACGTCGCCCAGTTCACCATGACCAAG |
| CFA2_MYCTU/11-302 | ACGCAGCTCAAGCCGCCGGTCGAAGCAGTTCGATCCCACTACGACAAATCGAACGAGTTCTTCAAGCTCTGGCTTGACCCATCGATGACGTACAGCTGCGCCTACTTCGAACGT---------------------CCCGATATGACGCTGGAAGAGGCGCAGTACGCGAAGCGCAAGCTGGCACTGGACAAGCTGAACCTTGAGCCCGGCATGACGCTGCTCGACATCGGCTGCGGCTGGGGTTCCACCATGCGACACGCGGTCGCCGAGTACGACGTCAACGTCATCGGCTTGACCCTGAGCGAAAACCAGTACGCCCACGACAAGGCGATGTTCGATGAGGTCGACAGCCCCCGCCGAAAAGAGGTGCGAATCCAGGGCTGGGAGGAGTTCGACGAG---------CCGGTCGACCGCATCGTGTCACTCGGTGCGTTTGAGCATTTCgccgacggtgccggggacgccGGGTTCGAGCGCTACGACACCTTCTTCAAGAAGTTCTACAATTTGACGCCCGACGACGGCCGGATGCTGCTGCACACCATCACTATCCCGGACAAAGAGGAAGCCCAGGAGCTGGGCTTGACGTCTCCGATGAGCCTGCTGCGCTTCATCAAGTTCATCCTGACCGAGATCTTCCCGGGCGGGCGGCTGCCCAGGATCTCGCAGGTGGACTAT---TACTCCTCCAACGCCGGATGGAAGGTCGAGCGCTACCACCGGATCGGGGCCAACTACGTGCCGACCCTGAACGCCTGGGCGGATGCGCTACAGGCGCACAAAGATGAGGCGATCGCCCTC---AAGGGCCAGGAGACGTACGACATCTACATGCACTACCTACGTGGCTGCTCAGACCTGTTCCGCGACAAGTACACGGACGTCTGCCAGTTCACTCTGGTCAAA |
| P72028_MYCTU/12-296 | ACCAAGACACGGACACGCTTCGAAGACATCCAAGCGCACTACGACGTCTCCGATGATTTCTTCGCCCTGTTCCAGGACCCGACCCGAACTTACAGCTGTGCCTACTTCGAGCCA---------------------CCGGAGCTCACGCTCGAAGAAGCCCAATACGCCAAGGTCGACCTCAACCTGGACAAGCTGGACCTCAAGCCGGGCATGACGCTGCTGGACATTGGGTGCGGTTGGGGCACCACCATGAGGCGCGCCGTCGAGCGGTTCGACGTTAACGTCATCGGCCTGACGTTGTCCAAGAACCAGCTCGCCCGCTGCGAGCAAGTGCTGGCTTCGATCGACACCAACCGCTCACGTCAAGTGCTGCTGCAAGGCTGGGAGGATTTCGCCGAA---------CCCGTCGACCGGATTGTGTCGATCGAAGCCTTCGAGCACTTC.....................GGGCACGAGAACTACGACGACTTCTTCAAGCGGTGTTTCAACATCATGCCCGCCGACGGCCGGATGACCGTCCAGAGCAGCGTCAGCTACCACCCCTACGAGATGGCGGCCCGCGGTAAGAAGCTGAGCTTCGAGACGGCGCGTTTCATCAAGTTCATCGTCACCGAGATATTTCCCGGCGGCCGCCTGCCGTCCACCGAGATGATGGTCGAA---CACGGCGAGAAGGCCGGTTTCACCGTCCCGGAGCCGCTCTCGTTGCGCCCGCATTACATCAAGACGCTGCGGATCTGGGGGGACACGCTGCAGTCCAATAAGGACAAGGCCATCGAGGTC---ACCTCCGAAGAGGTCTACAACCGCTACATGAAGTATTTGCGTGGCTGCGAGCACTACTTCACCGACGAGATGCTCGACTGCAGCCTGGTGACCTACCTCAAG |
| CFA1_MYCTU/3-287 | GACGAGCTGAAGCCGCACTTCGCCAACGTGCAGGCGCACTACGACCTGTCCGACGACTTCTTCCGGCTGTTCCTCGATCCCACTCAGACCTACAGCTGCGCCTACTTCGAGCGC---------------------GACGACATGACGCTGCAAGAGGCGCAGATCGCCAAGATCGATCTCGCGCTGGGCAAACTCGGATTGCAGCCGGGCATGACACTGTTGGACGTCGGCTGCGGCTGGGGCGCCACCATGATGCGCGCGGTGGAAAAATACGACGTCAACGTCGTCGGTCTGACCCTGAGCAAAAACCAGGCCAACCACGTTCAGCAGCTGGTCGCCAACTCCGAAAATCTACGCTCCAAACGCGTTCTGCTGGCCGGCTGGGAACAGTTTGACGAG---------CCCGTCGACCGCATCGTCAGCATCGGTGCTTTCGAACATTTC.....................GGTCACGAGCGCTACGACGCGTTCTTCAGCCTGGCGCATCGCCTGCTGCCCGCTGACGGGGTCATGCTGCTGCACACCATCACCGGGTTGCATCCGAAAGAGATCCACGAACGCGGCCTGCCCATGTCGTTCACCTTCGCTCGTTTCCTGAAATTCATTGTGACCGAGATCTTTCCGGGTGGGCGGCTGCCCTCGATACCGATGGTGCAGGAG---TGTGCCAGCGCAAACGGCTTCACCGTCACCAGAGTTCAATCGTTGCAGCCGCACTATGCGAAAACCCTCGACCTCTGGTCCGCGGCGTTGCAGGCCAACAAGGGCCAGGCCATCGCGCTG---CAATCCGAGGAAGTCTACGAGCGGTATATGAAGTACCTCACCGGCTGCGCCGAGATGTTTCGCATCGGATACATCGACGTCAACCAGTTCACCTGCCAGAAG |
| P72026_MYCTU/33-317 | AACGACCTAACGCCGCACTTCGAGGACGTGCAGGCACACTACGACCTGTCCGACGACTTCTTCCGGCTGTTCCTGGATCCGACCCAGACCTACAGCTGCGCGCATTTCGAACGC---------------------GAGGACATGACGCTGGAAGAGGCCCAGATCGCCAAGATCGACCTGGCGCTGGGCAAGCTAGGTCTGCAGCCCGGCATGACGCTGCTCGATATCGGTTGCGGCTGGGGCGCCACCATGCGGCGCGCGATCGCGCAGTATGACGTCAACGTCGTCGGCCTGACATTGTCGAAGAACCAGGCCGCCCATGTGCAGAAGTCGTTCGACGAGATGGACACCCCGCGCGACAGGCGAGTGTTGCTGGCGGGATGGGAGCAGTTCAACGAG---------CCCGTCGACCGCATCGTGTCGATCGGCGCGTTCGAGCACTTC.....................GGCCACGATCGTCACGCCGACTTCTTCGCCCGGGCCCACAAAATCCTGCCGCCCGATGGCGTGTTGCTGCTGCACACGATCACCGGCCTGACCAGGCAGCAGATGGTCGACCACGGCTTGCCGCTCACGTTGTGGCTGGCCCGCTTTCTCAAGTTCATCGCGACCGAAATCTTCCCGGGGGGCCAACCTCCGACGATTGAAATGGTTGAGGAA---CAGTCGGCGAAGACGGGTTTCACGCTGACTCGCCGCCAGTCGCTGCAGCCGCATTACGCCAGGACCCTCGACCTGTGGGCCGAGGCGCTGCAGGAACACAAAAGCGAGGCCATCGCGATC---CAGTCCGAAGAGGTCTACGAGCGGTACATGAAATACCTGACCGGCTGCGCCAAGCTGTTCCGGGTCGGCTACATCGACGTCAACCAGTTCACGCTGGCGAAG |
| P72027_MYCTU/9-293 | ACAAAGTCTCGGTCCAATGTCGACGACGTCCAAGCCCATTACGACCTTTCAGATGCGTTCTTCGCGCTGTTCCAGGATCCGACTCGGACCTACAGCTGCGCCTACTTCGAGCGC---------------------GACGACATGACCTTGCACGAAGCACAGGTCGCCAAGCTGGACCTAACCCTGGGCAAGCTGGGGCTAGAACCGGGAATGACACTGCTCGACGTGGGCTGCGGCTGGGGTTCGGTCATGAAGCGTGCCGTCGAGCGCTACGACGTCAACGTCGTCGGCTTGACCCTGTCGAAAAATCAGCACGCCTACTGCCAGCAAGTGCTCGACAAGGTCGACACCAACCGCTCGCACCGGGTACTGCTGAGCGACTGGGCCAACTTCAGCGAG---------CCGGTGGACCGCATCGTAACCATCGAAGCGATAGAGCACTTC.....................GGTTTCGAGCGCTACGATGACTTCTTCAAGTTCGCCTACAACGCGATGCCCGCGGACGGCGTGATGCTGCTGCACTCGATCACCGGCTTGCACGTAAAGCAGGTCATCGAGCGCGGCATACCGTTGACCATGGAGATGGCCAAATTCATCCGGTTCATCGTGACCGACATCTTCCCGGGCGGCCGGTTGCCGACGATCGAGACGATCGAGGAG---CATGTGACGAAGGCCGGTTTCACCATTACCGATATCCAGTCCCTGCAACCGCACTTCGCCAGGACTCTTGACCTGTGGGCCGAGGCGCTTCAAGCGCACAAGGACGAGGCCATCGAGATC---CAGTCCGCAGAGGTATACGAGCGGTACATGAAATACCTGACCGGCTGCGCCAAGGCGTTCCGAATGGGCTACATCGACTGCAACCAGTTCACGCTGGCCAAG |