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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF02353 alignment
(12 sequences with 304 aa)


YLP3_PSEPU/98-376 HDKRTDAEAISYHYDVSNAFYQLWLDQDMAYSCAYFRE-------PDNTLDQAQQDKFDHLCRKLRLNAGDYLLDVGCGWGGLARFAAREYDAKVFGITLSKEQLKLGRQRVKAEGLTDKVDLQILDYRDLPQDG-RFDKVVSVGMFEHV.......GHANLALYCQKLFGAVREGGLVMNHGITAKHVDGRPVGRGAG--------EFIDRYVFPHGELPHLSMISA-SICEAGLEVVDVESLRLHYAKTLHHWSENLENQLHKAAAL-VPEKTLRIWRLYLAGCAYAFEKGWINLHQILAVK
O69515_MYCLE/149-422 HSKTRDAEAIRHHYDVSNRFYEWVLGPSMTYTCAVYPN-------AEATLEEAQENKYRLIFEKLRLQPGDRLLDVGCGWGGMVRYAARR-GVRVIGATLSAEQAKWARKAIDNEGLAEIAQVRYSDYRDIRET--EFDAVSSIGLTEHI.......GVKNYPAYFNFLKLKLRTGGLLLNHCITRRDNKSTSFAG-----------GFTDRYVFPDGELTGSGRITT-EIQEVGLEVLHEENFRHHYAMTLRDWCHNLVEHWEDAVAE-VGLPIAKVWGLYMAASRVAFEQNNLQLHHILATK
O25171_HELPY/100-374 QKPIKESSNISKHYDLGNDFYSIWLDETLSYSCAYFKK-------DDDTLHAAQLQKLDHTLKKLHLKPGEKLLDIGCGWGYLSVKAAQEYGAEVMGITISSEQYKQANKRVQELGLEDKVTIKLLNYQDLDGRLYRFDKVVSVGMFEHV.......GKDNLPFYFKKVKEVLKRGGMFLLHSILCCFEGKTN--------------AWVDKYIFPGGYLPSLREVMS-VMSECDFHLLMAESLRIHYAKTLDIWRNNFNHNLDQVKRLSYDERFIRMWDLYLRTCASAFRVGSADLFQLLLTN
O67624_AQUAE/105-378 FRTIRDERNVKHHYDLGNDFYRLWLDKSMTYSCAFFED-------PSMSIDEAQSLKRRIIYEKLQLKEGDTLLDIGCGWGSIILESAELYNVKSVGITLSDNQYEYVKEEIKKRGLQDKVEVYKLHYVDLPKLGRKFNKVVSVGMFEHV.......GKENYETFFNTVYKVMEEGGLFLLHTIGKLHPDTQS--------------RWIRKYIFPGGYLPSISEIVE-SFRDMDFTLIDFDNWRMHYYWTLKKWKERFYENLDKIRNM-FDDRFIRMWELYLTASAVSFLIGSNYVFQILLSK
CFA_ECOLI/106-371 QSKKRAWIVGKEHYDLGNDLFSRMLDPFMQYSCAYWKD-------AD-NLESAQQAKLKMICEKLQLKPGMRVLDIGCGWGGLAHYMASNYDVSVVGVTISAEQQKMAQERCEGLD----VTILLQDYRDLND---QFDRIVSVGMFEHV.......GPKNYDTYFAVVDRNLKPEGIFLLHTIGSKKTDLNVD-------------PWINKYIFPNGCLPSVRQIAQ--SSEPHFVMEDWHNFGADYDTTLMAWYERFLAAWPEIADN-YSERFKRMFTYYLNACAGAFRARDIQLWQVVFSR
O53732_MYCTU/140-423 HSRDQARRNIAVHYDLSNDLFAAFLDETMTYSCAMFTDLLAQPTPAWTELAAAQRRKIDRLLDVAGVQQGSHVLEIGTGWGELCIRAAAR-GAHIRSVTLSVEQQRLARQRVAAAGFGHRVEIDLCDYRDVDG---QYDSVVSVEMIEAV.......GYRSWPRYFAALEQLVRPGGPVAIQAITMPHHRMLATRHTQ---------TWIQKYIFPGGLLPSTQAIIDITGQHTGLRIVDAASLRPHYAETLRLWRERFMQRRDGLAHLGFDEVFARMWELYLAYSEAGFRSGYLDVYQWTLIR
MMA1_MYCTU/2-286 AKLRPYYEESQSAYDISDDFFALFLDPTWVYTCAYFER-------DDMTLEEAQLAKVDLALDKLNLEPGMTLLDVGCGWGGALVRAVEKYDVNVIGLTLSRNHYERSKDRLAAIGTQRRAEARLQGWEEFEE---NVDRIVSFEAFDAF.......KKERYLTFFERSYDILPDDGRMLLHSLFTYDRRWLHEQGIALTMSDLRFLKFLRESIFPGGELPSEPDIVD-NAQAAGFTIEHVQLLQQHYARTLDAWAANLQAARERAIAV-QSEEVYNNFMHYLTGCAERFRRGLINVAQFTMTK
CFA2_MYCTU/11-302 TQLKPPVEAVRSHYDKSNEFFKLWLDPSMTYSCAYFER-------PDMTLEEAQYAKRKLALDKLNLEPGMTLLDIGCGWGSTMRHAVAEYDVNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEEFDE---PVDRIVSLGAFEHFadgagdaGFERYDTFFKKFYNLTPDDGRMLLHTITIPDKEEAQELGLTSPMSLLRFIKFILTEIFPGGRLPRISQVDY-YSSNAGWKVERYHRIGANYVPTLNAWADALQAHKDEAIAL-KGQETYDIYMHYLRGCSDLFRDKYTDVCQFTLVK
P72028_MYCTU/12-296 TKTRTRFEDIQAHYDVSDDFFALFQDPTRTYSCAYFEP-------PELTLEEAQYAKVDLNLDKLDLKPGMTLLDIGCGWGTTMRRAVERFDVNVIGLTLSKNQLARCEQVLASIDTNRSRQVLLQGWEDFAE---PVDRIVSIEAFEHF.......GHENYDDFFKRCFNIMPADGRMTVQSSVSYHPYEMAARGKKLSFETARFIKFIVTEIFPGGRLPSTEMMVE-HGEKAGFTVPEPLSLRPHYIKTLRIWGDTLQSNKDKAIEV-TSEEVYNRYMKYLRGCEHYFTDEMLDCSLVTYLK
CFA1_MYCTU/3-287 DELKPHFANVQAHYDLSDDFFRLFLDPTQTYSCAYFER-------DDMTLQEAQIAKIDLALGKLGLQPGMTLLDVGCGWGATMMRAVEKYDVNVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQFDE---PVDRIVSIGAFEHF.......GHERYDAFFSLAHRLLPADGVMLLHTITGLHPKEIHERGLPMSFTFARFLKFIVTEIFPGGRLPSIPMVQE-CASANGFTVTRVQSLQPHYAKTLDLWSAALQANKGQAIAL-QSEEVYERYMKYLTGCAEMFRIGYIDVNQFTCQK
P72026_MYCTU/33-317 NDLTPHFEDVQAHYDLSDDFFRLFLDPTQTYSCAHFER-------EDMTLEEAQIAKIDLALGKLGLQPGMTLLDIGCGWGATMRRAIAQYDVNVVGLTLSKNQAAHVQKSFDEMDTPRDRRVLLAGWEQFNE---PVDRIVSIGAFEHF.......GHDRHADFFARAHKILPPDGVLLLHTITGLTRQQMVDHGLPLTLWLARFLKFIATEIFPGGQPPTIEMVEE-QSAKTGFTLTRRQSLQPHYARTLDLWAEALQEHKSEAIAI-QSEEVYERYMKYLTGCAKLFRVGYIDVNQFTLAK
P72027_MYCTU/9-293 TKSRSNVDDVQAHYDLSDAFFALFQDPTRTYSCAYFER-------DDMTLHEAQVAKLDLTLGKLGLEPGMTLLDVGCGWGSVMKRAVERYDVNVVGLTLSKNQHAYCQQVLDKVDTNRSHRVLLSDWANFSE---PVDRIVTIEAIEHF.......GFERYDDFFKFAYNAMPADGVMLLHSITGLHVKQVIERGIPLTMEMAKFIRFIVTDIFPGGRLPTIETIEE-HVTKAGFTITDIQSLQPHFARTLDLWAEALQAHKDEAIEI-QSAEVYERYMKYLTGCAKAFRMGYIDCNQFTLAK