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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF02309 alignment
(11 sequences with 279 aa)


IAA27_ARATH/38-297 LNFKATELRLGLPGSESPERVDSRFLALNKSSCPVSG---AKRVFSdAINDSNKWVFSPGSTTATGDVGSGSGPRTSVVKDG--------------.KSTTFTKPAVPVKEKKSSATAPASKAQVVGWPPIRSFRKNSMASSQsqkpgnnSETEEAEAKSGPEQPCL.YVKVSMEGAPYLRKIDLKTYKSYLELSSALEKMFSCFTIGQFGSHGGCGRDGLNESRLTDLLRGSEYVVTYEDKDSDWMLVGDVPWEMFICSCKKLRIMKSSEAIGLAPRV
IAA3_ARATH/5-189 VNLKETELRLGLPG-TD----------------NV-----------.--CEAKERVSCCNNNN-KRVLSTDTEKEIESSSR---------------.---------------KTETSPPR-KAQIVGWPPVRSYRKNNIQSK-.......------KNESEHEGQGI.YVKVSMDGAPYLRKIDLSCYKGYSELLKALEVMFKFSVGEYFERDG---------------YKGSDFVPTYEDKDGDWMLIGDVPWEMFICTCKRLRIMKGSEAKGLGCGV
IAA4_ARATH/11-185 VNLKATELRLGLPG-T------------------------------.------EETVSCGKSN-KRVLPEATEKEIESTG----------------.---------------KTETASPP-KAQIVGWPPVRSYRKNNVQTK-.......------KSES--EGQGN.YVKVSMDGAPYLRKIDLTMYKQYPELMKSLENMFKFSVGEYFEREG---------------YKGSDFVPTYEDKDGDWMLVGDVPWEMFVSSCKRLRIMKGSEVKGLGCGG
IAA4_PEA/1-189 MEFKATELRLGLPGITE----------------EE-----------.--EKKIIHGSSVVKNNNKRQLPQTSEESVSISKVT-------------N.----------DEHIVESSSAAPPAKAKIVGWPPIRSYRKNSLH---.......--------EA--DVGGI.FVKVSMDGAPYLRKIDLRVYGGYSELLKALETMFKLTIGEYSEREG---------------YKGSEYAPTYEDKDGDWMLVGDVPWDMFVTSCKRLRIMKGTEAKGLGCGV
AX22B_PHAAU/11-196 LNLKATELRLGLPG-TE----------------EK-----------.--EDNNLRTHAVLRNN-KRQVRETSQDSVSISKAS-------------H.----------HQQHVETVSAPPP-KAKIVGWPPIRSYRKNSVQ---.......--------EG--EGDGI.FVKVSMDGAPYLRKVDLKVYGGYPELLKALETMFKLAIGEYSEREG---------------YKGSEYAPTYEDKDGDWMLVGDVPWDMFVTSCKRLRIMKGSEARGLGCVV
AUX28_SOYBN/1-233 MGFEETELRLGLPGNGG----TEEVLIRKRGFSET-----------.--ETGHEDESATT----VDLMLNLSSKEAATTAAA-------AADP---.TDKHKTLPKEKTLLPADPAKPP-AKTQVVGWPPVRSFRKNMLAVQK.......SVGEESEKNSSPN--AS.FVKVSMDGAPYLRKVDLKMYKSYRELSDSLGKMFSSFTFGNCESQG--MKDFMNESKLNDLLNSSDYVPTYEDKDGDWMLVGDVPWEMFVESCKRLRIMKGKEAIGLGLAP
IAA6_PEA/6-170 LGLEITELRLGLSCGE------------------------------.-----------PKKN-EKK--RMFSEIDGGVEEN---------------.-------------GGSGDRKSVDKKNQVVGWPPVCSYRKKN-M---.......-------NEGSK----M.YMKVSMDGAPYLRKIDLCLHKGYLELALALEKLFDCCGIEEALKDA----------------ENCEHVPIYEDKDGDWMLVGDVPWEMFIESCKRLRIMKRSDAKGFD-LQ
AX22A_PHAAU/6-180 LGLEITELRLGLPDAEH-----------------------------.---VAV-----ANKNGEKKNKRVFSEIDDVGDENS--------------.-----------SSGGGGDRK-MENKNQVVGWPPVCSYRKKNSV---.......-------NEASK----M.YVKVSMDGAPFLRKMDLGMHKGYSDLAFALEKLFGCYGMVEALKNV----------------ENGEHVPIYEDKDGDWMLVGDVPWEMFMESCKRLRIMKRADAKGFG-LQ
IAA6_ARATH/6-187 LALEITELRLGLPGDN---------------YSEISV---------.-----------CGSS--KKKKRVLSDMMTSSALDT-------ENENSVV.------------SSVEDESLPVV-KSQAVGWPPVCSYRRKKNN---.......-------EEASK---AIgYVKVSMDGVPYMRKIDLGSSNSYINLVTVLENLFGCLGIG-VAKEG----------------KKCEYIIIYEDKDRDWMLVGDVPWQMFKESCKRLRIVKRSDATGFG-LQ
IAA9_ARATH/61-328 ISLKATELTLGLPGSQSPARDTELNLLSPAKLDEKPFFPLLPSKDE.ICSSSQKNNASGNKRGFSDTMDQFAEAKSSVYTEKNWMFPEAAATQSVTkKDVPQNIPKGQSSTTNNSSSPPAAKAQIVGWPPVRSYRKNTLAT--.......TCKNSDEVDGRPGSGAL.FVKVSMDGAPYLRKVDLRSYTNYGELSSALEKMFTTFTLGQCGSNGAAGKDMLSETKLKDLLNGKDYVLTYEDKDGDWMLVGDVPWEMFIDVCKKLKIMKGCDAIGLAAAP
IAA8_ARATH/47-311 LNFKATELRLGLPESQSPERETDFGLLSPRTPDEKLLFPLLPSKDNgSATTGHKNVVSGNKRGFADTWDEFSGVKGSVRPGG-----GINMMLSPKvKDVSKSIQEERSHAKGGLNNAPAAKAQVVGWPPIRSYRKNTMASS-.......TSKNTDEVDGKPGLGVL.FVKVSMDGAPYLRKVDLRTYTSYQQLSSALEKMFSCFTLGQCGLHGAQGRERMSEIKLKDLLHGSEFVLTYEDKDGDWMLVGDVPWEIFTETCQKLKIMKGSDSIGLAPGA