EMBL-EBI > Goldman Group

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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF02309 alignment
(11 sequences with 837 bp)


IAA27_ARATH/38-297 CTCAATTTCAAGGCTACCGAGTTAAGACTCGGTTTACCCGGTTCTGAGTCGCCGGAGCGAGTCGACTCAAGATTCTTGGCTCTCAACAAGAGTAGCTGTCCCGTGTCAGGT---------GCCAAAAGGGTGTTCTCCgacGCTATTAACGACTCTAACAAATGGGTCTTCTCTCCTGGATCCACTACTGCTACTGGTGATGTCGGCTCGGGTTCTGGTCCCCGTACCTCCGTCGTTAAAGATGGA------------------------------------------...AAGTCGACAACTTTCACTAAACCGGCTGTTCCGGTTAAGGAGAAGAAGAGCTCTGCTACAGCTCCAGCTTCAAAAGCACAAGTGGTGGGATGGCCACCAATAAGATCATTCAGGAAGAACTCAATGGCTTCTTCTCAAtctcagaaacctggtaataacTCAGAGACTGAAGAAGCAGAAGCTAAGTCTGGACCAGAACAACCTTGCTTG...TATGTCAAAGTGAGTATGGAAGGTGCTCCTTACTTGAGGAAAATCGATCTCAAGACTTACAAAAGCTACCTTGAGCTCTCTTCTGCTCTTGAGAAGATGTTCAGTTGCTTCACCATTGGTCAGTTTGGTTCTCATGGAGGGTGTGGCAGAGATGGGTTAAACGAGAGTCGCTTGACTGATCTCTTGCGTGGTTCTGAGTATGTTGTAACCTATGAAGATAAAGACAGTGACTGGATGCTGGTCGGAGATGTCCCTTGGGAAATGTTTATATGCTCCTGCAAGAAGCTGAGAATCATGAAGAGCTCTGAGGCTATCGGCTTAGCTCCAAGGGTG
IAA3_ARATH/5-189 GTTAACCTCAAGGAAACAGAGCTGAGGCTGGGATTACCGGGA---ACAGAT------------------------------------------------AATGTA---------------------------------...------TGTGAAGCAAAAGAGAGAGTTTCTTGCTGTAATAACAACAAT---AAGAGAGTACTATCAACTGATACTGAGAAGGAGATTGAATCATCATCAAGG---------------------------------------------...---------------------------------------------AAAACTGAAACATCCCCTCCTCGA---AAGGCTCAGATTGTTGGATGGCCACCAGTTAGATCTTACAGGAAGAACAACATTCAGAGTAAG---.....................------------------AAGAATGAATCTGAGCATGAGGGTCAAGGAATC...TATGTGAAAGTAAGTATGGATGGTGCACCATACTTGAGGAAAATAGATCTGAGTTGTTACAAAGGATACTCAGAGTTGCTTAAAGCTTTAGAAGTGATGTTCAAATTCTCTGTGGGAGAGTACTTTGAGAGAGATGGA---------------------------------------------TATAAAGGTTCAGACTTTGTGCCTACTTATGAAGACAAAGATGGTGATTGGATGCTCATTGGTGATGTTCCATGGGAGATGTTCATATGTACGTGCAAGAGACTAAGGATCATGAAAGGATCAGAAGCCAAAGGTTTAGGCTGTGGTGTA
IAA4_ARATH/11-185 GTTAACCTAAAGGCAACAGAGCTGAGATTGGGATTACCAGGG---ACA------------------------------------------------------------------------------------------...------------------GAAGAAACTGTTTCTTGTGGAAAAAGCAAC---AAAAGAGTTTTACCTGAAGCTACTGAGAAAGAGATTGAATCCACTGGA------------------------------------------------...---------------------------------------------AAAACTGAAACCGCTTCTCCTCCA---AAGGCTCAGATTGTTGGATGGCCACCAGTTAGATCTTACAGAAAGAACAATGTTCAGACAAAG---.....................------------------AAGAGTGAATCT------GAAGGTCAAGGAAAC...TATGTGAAAGTAAGTATGGATGGTGCTCCATATCTAAGGAAGATAGATCTAACGATGTATAAACAATATCCAGAGTTGATGAAATCACTTGAAAACATGTTTAAATTCTCTGTGGGAGAATATTTTGAGAGAGAAGGA---------------------------------------------TATAAAGGCTCAGACTTTGTACCTACTTATGAAGACAAAGATGGTGATTGGATGCTTGTTGGTGATGTTCCTTGGGAGATGTTTGTTTCGTCTTGTAAGAGGCTAAGGATCATGAAAGGATCTGAAGTTAAAGGTTTAGGTTGTGGTGGT
IAA4_PEA/1-189 ATGGAATTCAAGGCAACTGAGCTTAGATTGGGGTTACCAGGAATAACAGAG------------------------------------------------GAAGAG---------------------------------...------GAGAAGAAAATCATACATGGTAGTAGTGTTGTTAAGAACAACAACAAAAGACAATTACCTCAAACTTCTGAAGAATCTGTTTCAATTTCCAAGGTTACA---------------------------------------AAC...------------------------------GATGAGCATATTGTGGAAAGTTCTTCTGCAGCCCCTCCTGCAAAAGCAAAGATAGTTGGGTGGCCACCGATTAGATCTTACAGGAAAAACAGTTTGCAT---------.....................------------------------GAGGCT------GATGTTGGTGGGATC...TTTGTGAAAGTGAGCATGGATGGTGCCCCTTACCTTAGAAAGATTGACTTAAGGGTCTATGGAGGGTACTCAGAATTACTCAAAGCTCTAGAAACCATGTTCAAGTTGACCATAGGTGAGTATTCTGAAAGAGAAGGT---------------------------------------------TATAAGGGATCTGAATATGCACCAACTTATGAAGACAAGGATGGTGATTGGATGTTAGTTGGAGATGTTCCATGGGACATGTTTGTGACTTCCTGCAAAAGGCTAAGAATCATGAAAGGCACAGAAGCTAAAGGATTGGGTTGTGGTGTA
AX22B_PHAAU/11-196 CTGAACCTCAAGGCAACAGAACTTAGATTAGGGTTGCCAGGG---ACAGAG------------------------------------------------GAAAAG---------------------------------...------GAAGACAACAACCTGCGTACACATGCTGTTCTTAGAAACAAC---AAAAGACAAGTGCGTGAAACTTCTCAAGACTCCGTTTCCATTTCCAAGGCTTCA---------------------------------------CAT...------------------------------CACCAACAACACGTAGAGACTGTTTCAGCCCCTCCACCC---AAAGCAAAGATAGTGGGGTGGCCACCAATCAGATCCTACAGGAAGAACAGTGTGCAG---------.....................------------------------GAGGGT------GAGGGGGATGGGATC...TTTGTGAAAGTGAGCATGGATGGAGCACCTTACCTCAGAAAAGTTGACTTGAAAGTCTACGGGGGCTATCCAGAACTACTCAAAGCTTTAGAAACCATGTTCAAGTTGGCCATAGGTGAGTACTCTGAAAGAGAGGGT---------------------------------------------TATAAAGGGTCTGAATATGCTCCTACATATGAAGACAAGGATGGTGACTGGATGCTAGTTGGAGATGTACCATGGGACATGTTTGTGACTTCTTGCAAAAGGCTAAGAATCATGAAAGGCTCGGAAGCAAGAGGGCTGGGTTGTGTTGTA
AUX28_SOYBN/1-233 ATGGGGTTTGAGGAAACTGAGTTAAGGCTTGGACTGCCTGGAAACGGAGGC------------ACTGAAGAAGTGCTCATCAGGAAGAGGGGTTTCTCTGAGACT---------------------------------...------GAAACTGGTCATGAAGATGAGTCTGCCACCACT------------GTGGATTTGATGCTTAATCTTTCTTCTAAGGAGGCCGCAACCACTGCTGCTGCT---------------------GCTGCAGATCCA---------...ACTGATAAGCACAAGACTTTGCCTAAGGAGAAGACCCTTCTGCCAGCAGATCCTGCTAAGCCTCCA---GCCAAGACGCAGGTGGTGGGTTGGCCACCTGTGCGGTCCTTCCGGAAGAACATGTTGGCTGTGCAAAAG.....................AGCGTTGGAGAAGAGAGCGAGAAGAACAGCAGCCCTAAT------GCAAGC...TTTGTCAAAGTTAGCATGGATGGAGCACCTTACCTTCGCAAAGTGGACTTGAAGATGTACAAGAGTTACCGAGAGCTCTCTGATTCTTTAGGCAAAATGTTCAGCTCCTTCACCTTTGGCAATTGTGAATCCCAAGGA------ATGAAGGATTTCATGAATGAGAGCAAGCTGAATGATCTCTTGAACAGCTCTGATTATGTCCCAACCTATGAGGACAAGGATGGTGACTGGATGCTTGTCGGTGATGTCCCATGGGAGATGTTTGTTGAATCATGCAAGCGTTTACGCATCATGAAAGGAAAGGAGGCTATTGGTCTTGGTCTTGCACCA
IAA6_PEA/6-170 TTAGGACTTGAGATAACTGAGCTAAGGTTAGGTTTATCATGTGGTGAG------------------------------------------------------------------------------------------...---------------------------------CCAAAGAAGAAT---GAGAAGAAG------AGGATGTTCTCGGAGATCGACGGTGGTGTGGAAGAAAAT---------------------------------------------...---------------------------------------GGAGGCTCCGGTGATCGGAAAAGTGTCGATAAGAAGAATCAAGTTGTCGGGTGGCCTCCGGTGTGCTCGTACCGGAAGAAGAAC---ATG---------.....................---------------------AATGAAGGTTCGAAA------------ATG...TATATGAAGGTTAGCATGGATGGAGCTCCTTACTTGCGTAAGATTGATCTTTGTTTGCATAAGGGTTACTTGGAGTTAGCTTTGGCTTTGGAGAAGCTCTTTGATTGTTGTGGAATTGAAGAGGCATTAAAGGATGCA------------------------------------------------GAAAATTGTGAACACGTTCCAATTTATGAGGACAAAGATGGTGATTGGATGCTGGTTGGAGATGTCCCTTGGGAGATGTTTATTGAGTCATGCAAGAGGCTGAGGATTATGAAGAGGTCAGATGCAAAGGGCTTTGAT---TTGCAA
AX22A_PHAAU/6-180 CTTGGACTTGAAATCACGGAGCTGAGATTGGGTCTACCCGACGCTGAGCAT---------------------------------------------------------------------------------------...---------GTGGCTGTG---------------GCTAACAAGAACGGTGAAAAGAAGAATAAGAGGGTGTTCTCGGAGATTGATGATGTTGGAGATGAAAACAGC------------------------------------------...---------------------------------TCCTCCGGCGGCGGTGGCGACCGGAAA---ATGGAGAACAAGAATCAAGTGGTGGGGTGGCCTCCGGTGTGCTCCTACAGGAAGAAGAACAGTGTG---------.....................---------------------AACGAAGCTTCGAAA------------ATG...TACGTTAAGGTTAGCATGGATGGTGCTCCTTTCTTGCGTAAAATGGATCTGGGTATGCACAAAGGATACTCCGATTTAGCCTTCGCTTTGGAGAAGCTCTTTGGTTGCTATGGAATGGTGGAAGCATTGAAGAATGTT------------------------------------------------GAGAATGGTGAACACGTTCCCATTTATGAGGACAAAGATGGTGACTGGATGCTTGTTGGAGATGTGCCATGGGAAATGTTCATGGAGTCTTGTAAGAGGTTGAGGATTATGAAGAGAGCAGATGCAAAGGGATTCGGT---TTGCAA
IAA6_ARATH/6-187 CTAGCACTCGAGATCACAGAGCTTCGATTGGGTCTTCCAGGAGATAAT---------------------------------------------TATAGCGAAATATCAGTA---------------------------...---------------------------------TGCGGATCGAGT------AAGAAGAAGAAGAGGGTGCTCTCGGATATGATGACCTCATCAGCGTTAGATACT---------------------GAGAATGAAAACAGCGTCGTT...------------------------------------TCATCAGTTGAAGATGAATCACTGCCGGTTGTG---AAGAGTCAAGCGGTGGGATGGCCACCTGTGTGTTCTTACAGGAGAAAGAAGAACAAT---------.....................---------------------GAGGAAGCATCGAAA---------GCTATAggcTACGTGAAAGTGAGCATGGATGGTGTGCCATACATGAGGAAGATTGACCTTGGTTCGAGCAACAGTTATATTAATCTAGTCACGGTTCTTGAGAATCTCTTCGGCTGTCTTGGCATAGGA---GTGGCGAAGGAGGGT------------------------------------------------AAGAAGTGTGAATACATTATTATATACGAAGACAAGGATAGAGACTGGATGCTCGTCGGAGATGTACCTTGGCAGATGTTTAAAGAATCATGCAAGAGGCTGAGGATCGTGAAGAGATCAGATGCAACTGGTTTTGGT---CTCCAG
IAA9_ARATH/61-328 ATCAGCCTCAAGGCTACGGAGCTGACACTTGGTCTTCCTGGATCACAATCTCCTGCGAGAGACACAGAGCTTAACCTTTTGAGCCCAGCAAAGCTAGATGAGAAGCCATTCTTTCCTTTGCTTCCTTCTAAAGATGAG...ATATGCTCCTCCTCGCAAAAGAACAATGCATCGGGAAACAAAAGAGGCTTTTCTGACACAATGGATCAGTTTGCTGAAGCTAAAAGTTCAGTGTATACTGAGAAAAACTGGATGTTCCCTGAAGCAGCAGCCACCCAGTCTGTAACAaagAAAGATGTGCCACAAAACATACCCAAAGGACAGTCTAGCACTACAAACAATAGCTCTAGTCCACCTGCAGCCAAGGCACAAATTGTCGGTTGGCCTCCAGTGAGATCCTACAGGAAGAACACATTGGCCACT------.....................ACTTGTAAGAACAGTGACGAAGTTGATGGGAGGCCAGGTTCTGGGGCTCTC...TTCGTGAAGGTCAGTATGGATGGTGCTCCTTATCTGAGGAAAGTTGACCTGAGGAGCTACACTAACTACGGGGAGCTTTCTTCAGCCTTGGAGAAAATGTTCACCACTTTCACTCTTGGTCAATGTGGATCTAATGGAGCTGCTGGGAAGGATATGCTTAGTGAGACCAAGCTCAAGGATCTTTTGAATGGAAAAGACTATGTGCTCACTTATGAGGATAAGGATGGTGACTGGATGCTTGTTGGAGATGTTCCGTGGGAGATGTTTATTGATGTCTGCAAGAAGCTGAAGATAATGAAAGGGTGTGATGCTATTGGGTTAGCTGCAGCTCCG
IAA8_ARATH/47-311 CTCAATTTCAAAGCTACTGAACTGAGGCTAGGTCTTCCTGAGTCTCAATCTCCTGAGAGAGAGACTGATTTCGGTTTGCTGAGTCCGAGAACACCCGATGAGAAGCTTCTCTTCCCGTTGCTACCTTCTAAAGACAATggtTCTGCTACTACAGGGCATAAGAATGTTGTTTCTGGTAACAAGAGAGGATTTGCTGACACTTGGGATGAGTTTTCGGGTGTGAAAGGATCTGTTAGACCTGGAGGA---------------GGAATCAACATGATGTTGTCGCCGAAAgttAAGGATGTCTCGAAGAGTATTCAAGAAGAAAGATCTCATGCTAAGGGTGGCTTGAACAATGCACCAGCTGCCAAGGCACAGGTTGTTGGTTGGCCTCCAATCAGATCATACCGGAAGAATACAATGGCTTCTTCT---.....................ACTTCGAAGAACACTGATGAGGTTGATGGGAAACCTGGTCTTGGTGTTCTG...TTTGTGAAGGTGAGCATGGATGGTGCTCCGTATCTGAGAAAGGTCGACTTGAGAACTTACACTTCCTATCAACAGTTGTCTTCTGCACTTGAGAAAATGTTCAGCTGCTTCACCCTTGGTCAATGTGGTCTTCATGGTGCTCAAGGGAGGGAAAGAATGAGCGAGATTAAACTGAAGGATCTTCTTCATGGATCAGAATTTGTGCTTACTTATGAAGATAAAGACGGTGATTGGATGCTTGTTGGCGATGTTCCATGGGAGATATTTACTGAAACATGCCAGAAACTGAAGATCATGAAGGGTTCTGATTCTATTGGCTTAGCTCCAGGTGCA