EMBL-EBI > Goldman Group

PANDIT Home | Browse PANDIT | Help on PANDIT | Release notes | Pfam



PANDIT Homepage
pan•dit
PANDIT
Protein and Associated NucleotideDomains with Inferred Trees
(View raw data for PF02254 - TrkA_N)
TrkA-N domain
(Pfam reference: accession no. PF02254)
(Interpro reference: accession no. IPR003148)


sequences alignment phylogeny
amino acids
(Pfam-A seed alignment)
227 sequences @ 207 aa
(ave. pairwise identity: 0.24)
(view Jalview alignment from Pfam)
New Hampshire format
(total tree length: 144.46)
nucleotides
(available for above)
225 sequences @ 621 bp
(ave. pairwise identity: 0.39)
New Hampshire format
(total tree length: 102.48)
amino acids, restricted set
(corresp. to available nt seqs)
225 sequences @ 207 aa
(ave. pairwise identity: 0.24)
New Hampshire format
(total tree length: 143.54)