EMBL-EBI > Goldman Group

PANDIT Home | Browse PANDIT | Help on PANDIT | Release notes | Pfam



PANDIT Homepage
pan•dit
PANDIT
Protein and Associated NucleotideDomains with Inferred Trees
(View raw data for PF02217 - T_Ag_DNA_bind)
Origin of replication binding protein
(Pfam reference: accession no. PF02217)
(Interpro reference: accession no. IPR003133)


sequences alignment phylogeny
amino acids
(Pfam-A seed alignment)
7 sequences @ 131 aa
(ave. pairwise identity: 0.38)
(view Jalview alignment from Pfam)
New Hampshire format
(total tree length: 4.74)
nucleotides
(available for above)
4 sequences @ 393 bp
(ave. pairwise identity: 0.44)
New Hampshire format
(total tree length: 2.34)
amino acids, restricted set
(corresp. to available nt seqs)
4 sequences @ 131 aa
(ave. pairwise identity: 0.33)
New Hampshire format
(total tree length: 3.26)