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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF02170 phylogeny
for amino acid alignment


 
((((((((Q19645_CAEEL/378-521,Q9XUY9_CAEEL/21-151),(((AGO1_SCHPO/212-349,(O48771_ARATH/258-396,(Q84VQ0_ARATH/266-399,(Q9SDG8_ORYSA/273-411,Q9ZVD5_ARATH/291-431)))),(((Q7XTS3_ORYSA/410-544,Q7XTS4_ORYSA/393-527),(Q9SHF2_ARATH/539-679,Q9SHF3_ARATH/368-505)),(((Q7XZZ9_ORYSA/265-385,Q7Y001_ORYSA/409-544),(Q8LNZ9_ORYSA/249-383,Q8LP00_ORYSA/332-469)),Q9C793_ARATH/375-507))),(((O16720_CAEEL/282-419,(Q8CGT8_MOUSE/372-485,(Q8CGT7_MOUSE/191-323,Q8CGU0_MOUSE/245-381))),Q9XVI3_CAEEL/289-426),YO43_CAEEL/374-509))),AGO2_DROME/602-740),(Q8MU01_HETGL/305-446,(((Q21691_CAEEL/378-523,(YQ53_CAEEL/367-504,(Q9N3L7_CAEEL/319-439,Q9TXN7_CAEEL/335-463))),(O61931_CAEEL/421-557,Q9XU82_CAEEL/334-443)),((O02095_CAEEL/298-439,O16386_CAEEL/274-413),(P91085_CAEEL/288-422,(O62275_CAEEL/317-451,Q9N585_CAEEL/328-461)))))),((Q7Z3Z3_HUMAN/292-429,((((Q7PWT1_ANOGA/189-313,Q7PLK0_DROME/294-425),((O76922_DROME/274-413,Q7QG53_ANOGA/191-324),PIWI_DROME/262-395)),(Q17567_CAEEL/116-252,Q86HF5_DICDI/661-780)),((((Q7Z3Z4_HUMAN/271-407,Q8CGT6_MOUSE/313-449),Q9GPA7_STRPU/272-405),(O95404_HUMAN/277-414,PIWI_BRARE/275-411)),Q8CDG1_MOUSE/386-523))),((Q8MQL1_TETTH/165-306,Q9U5C9_PARCA/175-308),Q86CV7_STYLE/193-324))),Q8LQJ0_ORYSA/698-852),(DICER_MOUSE/881-1055,(DCR1_CAEEL/785-961,(Q7QCW7_ANOGA/990-1161,DCR1_DROME/1099-1269)))),Q8LMR2_ORYSA/1158-1319,DICER_ARATH/1180-1341);
((((((((Q19645_CAEEL/378-521:1.68295,Q9XUY9_CAEEL/21-151:1.76555):0.53841,(((AGO1_SCHPO/212-349:0.80929,(O48771_ARATH/258-396:0.45554,(Q84VQ0_ARATH/266-399:0.18679,(Q9SDG8_ORYSA/273-411:0.24442,Q9ZVD5_ARATH/291-431:0.19075):0.10498):0.14991):0.55464):0.07129,(((Q7XTS3_ORYSA/410-544:0.44989,Q7XTS4_ORYSA/393-527:0.34704):0.33599,(Q9SHF2_ARATH/539-679:0.18445,Q9SHF3_ARATH/368-505:0.17040):0.50615):0.47455,(((Q7XZZ9_ORYSA/265-385:0.75380,Q7Y001_ORYSA/409-544:0.03920):0.45089,(Q8LNZ9_ORYSA/249-383:0.24443,Q8LP00_ORYSA/332-469:0.11313):0.20116):0.23058,Q9C793_ARATH/375-507:0.83705):0.12093):0.13729):0.12156,(((O16720_CAEEL/282-419:0.14773,(Q8CGT8_MOUSE/372-485:0.48545,(Q8CGT7_MOUSE/191-323:0.60507,Q8CGU0_MOUSE/245-381:0.00698):0.00000):0.16579):0.19426,Q9XVI3_CAEEL/289-426:0.71260):0.21961,YO43_CAEEL/374-509:0.98833):0.16994):0.10271):0.15486,AGO2_DROME/602-740:0.82590):0.22420,(Q8MU01_HETGL/305-446:1.44604,(((Q21691_CAEEL/378-523:0.62805,(YQ53_CAEEL/367-504:0.25472,(Q9N3L7_CAEEL/319-439:0.56784,Q9TXN7_CAEEL/335-463:0.30033):0.13106):0.34013):0.18902,(O61931_CAEEL/421-557:1.40388,Q9XU82_CAEEL/334-443:1.45411):0.41335):0.18969,((O02095_CAEEL/298-439:0.39106,O16386_CAEEL/274-413:0.48871):0.85229,(P91085_CAEEL/288-422:0.21006,(O62275_CAEEL/317-451:0.24466,Q9N585_CAEEL/328-461:0.18832):0.15799):0.57023):0.23833):0.13516):0.10491):0.69021,((Q7Z3Z3_HUMAN/292-429:0.47771,((((Q7PWT1_ANOGA/189-313:0.44803,Q7PLK0_DROME/294-425:0.54155):0.16228,((O76922_DROME/274-413:0.52766,Q7QG53_ANOGA/191-324:0.28311):0.11030,PIWI_DROME/262-395:0.41208):0.19485):0.10399,(Q17567_CAEEL/116-252:0.77868,Q86HF5_DICDI/661-780:0.55831):0.13739):0.17125,((((Q7Z3Z4_HUMAN/271-407:0.07860,Q8CGT6_MOUSE/313-449:0.13288):0.38244,Q9GPA7_STRPU/272-405:0.49991):0.05873,(O95404_HUMAN/277-414:0.23180,PIWI_BRARE/275-411:0.33981):0.13309):0.06302,Q8CDG1_MOUSE/386-523:0.60066):0.04773):0.06594):0.20017,((Q8MQL1_TETTH/165-306:0.53362,Q9U5C9_PARCA/175-308:0.59695):0.40549,Q86CV7_STYLE/193-324:0.39889):0.10778):0.53955):0.45818,Q8LQJ0_ORYSA/698-852:0.81048):0.38541,(DICER_MOUSE/881-1055:0.34875,(DCR1_CAEEL/785-961:0.50615,(Q7QCW7_ANOGA/990-1161:0.15215,DCR1_DROME/1099-1269:0.23315):0.26061):0.09411):0.60262):0.53360,Q8LMR2_ORYSA/1158-1319:0.14253,DICER_ARATH/1180-1341:0.18134);