EMBL-EBI > Goldman Group

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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF02113 alignment
(9 sequences with 1203 bp)


Q9Z541_STRCO/89-426 GAGCGTCTGGGCACCGACGTCAGCGGCGTCGTGCTCGACGCCGACTCGGACACCGCCCTGTGGGACCACAACGGCTCCACCGCCCTCATGCCGGCCTCCAACGCCAAGCTCGCCACGGCCACCACGGCCCTGACGCTGCTGGGCGCGAAC------------------CACGAGTTCACCACCAAGGTCGTGTACGGCGAGGGCACCCTCACCCTCGTCGGCGGCGGTGACCGCACCCTCACGGGCGAGGACGTGGCCGAGCTGGCCAGGACCGCCGCCGACGGG------------CTCAGGGCGGCGGGCCGCACCGACGTCCAGGTCCGGGTGGACGACAGCCTGTTCGCCGACCCG---------------AGCCTCGCCGAGGGC---TGGAACGAGGGCTACTACCCCACCGAGGTCGCGCCG------------------------------------------------------------------------------GTCCGT---TCCCTCGTCGTCGACGGCGCCGCCGTCCAGGACACCTCG---------------------------ATCGACGCGGGC---------AAGGTCTTCGCGAAGAAGCTCGCCGCACAGGGCATCACCGTCACCGGCGAGGTGGGCCGCCAGACGGCGAAGCAGTCC------...GACGTACCGGTGGCCCAGCACAAGTCGGCGCCGCTGTCGGACATCGTCAAGAAGATGCTCAAGACCAGCGACAACAACATCGCCGAGACCCTGCTCCGCATGACGGCCGTGGAGCTGGGC...AAGCCGGGCACCTTCGAGGCCGGCACCGCGCTCGTCCGCCAGGTGCTCAGCTCG---TACGGCATCTCCCTCGACAACTTCGAGATGCACGACGGCAGCGGCCTCTCCCGCGCCGACCGCATCCCGGCCGCCACCCTCGCGCAGCTCCTCGACGCGATCACG------GAGTCCCCCGCCCTGGGCTCGATCCTGGAGGGACTGCCGGTCTCCGGCGAGGCCGGGGCCAGCCTGGGTCCGGAGTGGGGACGCTTCGACGACCCCAACTCC---GAGTGCGCCGTCGGCAAGGTGCACGCCAAGACCGGCACGCTCACCGGTGCCATCGCCCTCAGCGGGGTCACGCGGACCGACGACGGCGACTGGCGGATCTTCTCCTTCATCGAGAAC
O69539_MYCLE/95-437 GCGATGACTGCCAAGGAACTCTGGCAGCAACAAGATGACATGCCGTTGGTGCCAGCGTCGGCCAATAAGCTCTTGACCGCAGCTGCGGCGCTGTTGACACTGGACCGCCAGACTCGGATCAGCACCCGGGTGGTGGCTGCAGGCCCG---------------------AATGCCCAAGGGCCTGTCGTTCTGGTGGGTGCTGGGGATCCGACCCTGTCGGCCGCATCGCCCGACCAGAGCACCTGGTATAGGGGTGCGCCGCGGATCAGTGACCTTGTCGAACAG------------GTTCGTCGCAGCGGCGTGACGCCTACGGCTGTTCAGGTGGATACCTCGCTGTTCACCGGTCCG---------------ACGATGGCGCAGGGC---TGGGATCCTGCCGATGTGGACAACGGCTACACTGCC------------------------------------------------------------------------CCGATCGAGTCGGCGATGATCGACGCTGGGCGTATCCAGCCGACAACCGTCAAA------------TCACGACGGTCACGTACCCCAGCTCTGGACGCCGGGCGGGAATTGGCCAAGGCCCTGGGGGTCGCTCCCGATGCGGTTACAATCGTCAAGGCATCGTCTGGG------------------...GCGCGGCAGCTGGCTGTGGTGCAGTCAGCGCCGCTGGTCCAGCGGTTATCCGAGATGATGGACAACTCCGACAACGTGCTGGCCGAATGCATCGGCCGCGAGGTAGCGGCCGCCATAAAC...CGGCCTTTGAGCTTTGCCGGCGCGGTCGACGCGGTGACCAACCGGTTAGGTACA---GCGCATATCGACACCACCGGCGCTGCTCTGGTGGATTCTAGCGGGTTGTCGGTCAACAACCGCTTGACCGCCAAGACACTCGGCGGTGCGGTGCAGGCGGCGGCGGGGCCGGATCAACCGGTGTTGCGTGCGCTGCTGGATCTGCTCCCGATCGCCGGCGGCAGCGGCACGTTATCGGAC---------CGCTTTCTCAGTTCGGCGACCCAC---CAGGGTCCGGCCGGCTGGTTACGTGCCAAGACCGGCTCGTTGACCGCTATTAATTCTTTGGTCGGGGTCGTCACTGACCGCAGCGGTCGGGTGTTGACATTCGCGTTCATCTCCAAC
O06380_MYCTU/95-437 GCCCTGACCGGACAAGAACTTTGGCAGCGGCTAGACGACGTGCCCTTGGTGCCGGCTTCGACCAACAAAATCCTGACGGCGGCGGCGGCTCTGCTGACACTGGACCGACAGGCCCGGATCAGCACGCGGGTGGTGGCCGGCGGCCAG---------------------AACCCCCAGGGACCTGTCGTGTTGGTGGGCGCGGGCGATCCGACGCTGTCGGCAGCGCCGCCCGGTCAGGACACCTGGTATCACGGCGCGGCTCGCATCGGTGACCTCGTCGAACAA------------ATTCGCCGCAGCGGTGTGACGCCCACCGCCGTGCAGGTGGACGCTTCGGCGTTTAGCGGTCCG---------------ACGATGGCGCCGGGT---TGGGATCCGGCCGATATCGACAACGGTGACATCGCG------------------------------------------------------------------------CCGATCGAAGCGGCGATGATCGACGCCGGGCGTATCCAGCCGACCACCGTCAAT------------TCGAGACGGTCCCGCACCCCGGCGCTGGATGCCGGTCGGGAGTTGGCCAAAGCCCTTGGCCTGGACCCCGCGGCGGTGACGATCGCATCGGCTCCGGCCGGC------------------...GCGCGGCAGCTGGCCGTGGTGCAGTCGGCGCCGTTGATCCAGCGACTGTCTCAGATGATGAACGCCTCCGACAATGTGATGGCCGAGTGCATCGGCCGCGAGGTAGCGGTCGCGATCAAC...CGGCCGCAGAGCTTTAGTGGCGCGGTCGACGCGGTGACCAGCCGATTGAACACC---GCACACATCGACACCGCCGGCGCTGCGCTGGTGGATTCTAGTGGATTGTCGCTCGACAACCGCCTGACCGCTCGGACGCTCGATGCAACGATGCAGGCCGCGGCTGGACCCGACCAGCCCGCGTTGCGGCCGCTGCTGGATCTGCTACCGATCGCCGGTGGCAGTGGCACGCTGGGCGAG---------CGCTTCCTCGACGCGGCCACCGAC---CAGGGTCCGGCCGGGTGGTTGCGGGCCAAGACCGGCTCGCTGACCGCGATCAACTCGCTAGTCGGGGTGCTCACCGACCGTAGCGGCCGAGTGCTCACCTTCGCGTTCATCTCCAAC
O85665_NEIGO/56-433 CCCGCGTCCACGATGAAGCTCGTTACCGCGTTTGCCGCCTTCAAAACCTTCGGCAGCAATTACCGCTGGGCGACCGAGTTTAAAAGCAACGGTACGGTAAACGACGGCACGCTTGACGGAAACCTGTATTGGGCGGGCAGCGGCGACCCCGTTTTCAATCAGGAAAACCTGCTTGCCGTCCAACGCCAGTTGCGCGACAAAGGCATCCGCAATATCACGGGGCGCCTGATGCTCGACCACAGCCTGTGGGGC---GAAGTCGGCAGTCCCGACCATTTTGAAGCCGACAGCGGTTCGCCGTTTATGACGCCCCCAAATCCGACTATGCTGTCTGCCGGTATGGTTATGGTGCGCGCCGAACGCAAT------GCCGCCGGCAGTACCGACATCCTCACCGATCCGCCTTTGCCGCATATTTTTGCCCAAAACAAC---------TTGAAAATTACCGCCTCCCAAGCTGCCTGCCCTTCGGTCAAAAAACTGATGCGCGCATCTTTTTCGGGCAATACGCTGAAATTGCGCGGCAATATTCCCGAAAGCTGTTTGGGCAAGCCTGTCGGTGTCCGGATGTTCGCGCTTGACGAACTGATCCGCCAAACTTTTACCAACCGCTGGCTGCTCGGCGGCGGACGGATTTCAGACGGCATCGGCATAGCCGACACACCGGAAGGC------...GCGCACACGCTTGCCGTTGCACACTCCAAACCGATGAAGGAAATTTTGACGGACATGAACAAGCGTTCGGACAATCTGATTGCGCGTTCCGTCTTCCTCAAACTCGGCGGCGACGGCAAA...CTGCCCGCCGTTTCCGAACAGGCGGCGTCTGCCGTCCGGCGAGAACTTGCCGTA---TCGGGCATCGATGTTGCGGATTTGGTTTTGGAAAACGGTTCGGGTCTGTCCAGAAAAGAAAGGGTAACGGCGAGAATGATGGCGCAAATCTTGGAAACGGCTTAT------TTCAGCCCGTTTGCACAAGATTTCATCGACACGCTGCCCATCGCCGGCACAGACGGGACTTTACGCAAC------------------------CGCTTCAAA------CAAAGCGGCGGGCTGTTGCGCTTAAAAACCGGCACGCTCAACAATGTCCGCGCCCTTGCAGGTTATTGGCTGGGCGACAAACCGATGGCGGTGGTCGTCATCATCAACAGCGGC
Q55728_SYNY3/88-453 CCCGCCTCCAACCAAAAATTAATTACCACCGCCATGGCTCTTCAGGAATTGGGGCCAAATTTTCGCTTTACCACCCAAGTTTATCAACGGGACGGGGGCAAAAAAGTCCAAGTTATCTCCAGCGGCGATCCCAGTTTTGACGTAGATGAC------------------CTAACGGCGATCGCCAAGGGTTTAAAAGATAGGGGGGTGACGGCGATCGAAGAATTGGAACTTGTAGATACCATTGCCCCCCAGGATTACCAACGCCCCAGTTGGGAGTGGGATGAT---TTGCACTACGGTTATGCTCCCCCGGTTAATGGTGCAATTTTGACTGGCAATCAAGTGATCCTTACCCTCACGCCCCAAAATCTGGGGGAACCATTGACCCCCACCTGGTCCGATCCCATTGCTGGGGCACAATGGCAGATCATTAAC------------------CAGACCGAAACGGCCGTTGATCCACACCAACCTCCCCAGGTACAACAGATTTTTGGTCAACGGCAATTGGTTATCACTGGCGGCCTGCCCCCCGCAGGGGAAACCCGTTCCATCACCCTAGCTGTGGCTGATCCCCAGCAATATTTCCTCGCCAGTTTGCAACAAAAGTTAGCAGAACAAGGCATTTCTGTAAGCACTTCGATCGTTAGCGCCAACACCAAGGCGATCGCCCCG...---GCCCCTTTGCTGGCTCTCACTTCCCCTCCCCTGTGGACACTGATTAAAACCGTCAACCAAGACAGCAATAACCTCTACGCTGAAGCGTTGCTCAATGCCATTCAGCCCCCT------...------------------TCCCAGGCTACGGATTGGCAGTCCTACGTGGAAAGA---CTAGGCCTAGCCACCACCACGGTCAGATTACGGGATGGCTCAGGACTTTCCCGTCAAGACCTAGTGACGCCCCAAGCCTTAGTTCAACTTTTAATTAACCAAACC------CAAAAATCAACGGGGACCATTTATCAACAATCCCTGGCCGTTGCTGGGCGATCGGGCACCCTGGAACGT------------------------AGTTTCGCCGATACTCCCCTGGTGGGCAAAATGCGGGGTAAAACAGGTACCCTCACAGGGGTGGTTTCCTTAACGGGCTATGTGGAAAACCAGCAATGGGGCACAGTGGCATTCAGTTTTATGGTCAAC
PBP_BACSU/79-469 CCTGCCTCTTCTCTAAAGCTTTTGACAGCGGCCGCGGCACTTTCTGTCCTTGGCGAGAACTATTCTTTTACAACCGAGGTCCGGACGGATGGAACACTGAAAGGGAAAAAGCTGAATGGTAACCTTTATTTGAAAGGGAAAGGCGATCCGACACTTTTACCATCTGATTTTGACAAAATGGCTGAGATATTGAAACATTCCGGCGTAAAAGTAATTAAAGGCAATCTGATCGGTGATGATACGTGGCATGATGACATGCGATTATCACCTGATATGCCTTGGAGCGATGAATACACATATTATGGCGCGCCAATCTCCGCTCTAACAGCGTCTCCAAACGAAGACTATGATGCAGGCACTGTGATTGTTGAGGTCACCCCAAATCAAAAAGAAGGGGAAGAGCCTGCCGTGTCTGTCTCTCCGAAAACCGATTATATAACGATAAAGAACGATGCTAAAACGACTGCTGCCGGTTCAGAGAAAGACCTCACAATCGAAAGAGAGCATGGAACAAACACGATTACAATTGAAGGGAGCGTACCGGTTGACGCAAACAAGACAAAGGAATGGATTTCTGTCTGGGAGCCTGCCGGATATGCCTTAGATTTATTTAAGCAGTCACTAAAAAAACAAGGTATTACTGTGAAAGGGGACATCAAGACGGGTGAAGCACCTAGTTCT------...TCAGATGTGCTGCTCTCTCATCGCTCAATGCCTTTATCGAAACTTTTTGTGCCGTTCATGAAATTAAGTAATAACGGACATGCCGAAGTGCTCGTAAAAGAGATGGGGAAAGTGAAAAAA...GGAGAAGGGAGCTGGGAAAAGGGGCTCGAAGTGTTAAACAGTACGCTTCCGGAA---TTTGGTGTTGATTCTAAATCACTCGTCTTAAGGGACGGATCAGGAATCTCACATATTGATGCTGTATCCTCAGATCAACTTTCACAGCTGTTATATGACATTCAG------GATCAGAGTTGGTTCTCGGCTTATCTAAATTCTTTACCTGTTGCGGGGAATCCTGACAGAATGGTGGGC---------GGAACGCTGAGAAACCGCATGAAAGGCACTCCTGCACAAGGAAAAGTAAGAGCAAAAACCGGATCGCTCAGTACGGTAAGCTCTCTATCGGGGTACGCAGAAACAAAGAGCGGAAAAAAACTTGTTTTCTCTATTCTTCTAAAT
DAC_ACTSP/96-487 CCCGCCTCCAACATGAAGCTGTTCACCGCGGCCGCCGCCCTGGAGGTCCTGGGCGCCGACCACTCCTTCGGGACCGAGGTCGCGGCCGAGTCCGCTCCCGGGCGCCGGGGAGAGGTGCAGGACCTCTACCTGGTGGGCCGGGGCGACCCGACGCTCTCCGCCGAGGACCTGGACGCCATGGCCGCCGAGGTCGCGGCCTCCGGGGTCCGCACGGTCAGGGGCGACCTGTACGCCGACGACACGTGGTTCGACTCCGAGCGGCTCGTGGACGACTGGTGGCCCGAGGACGAGCCCTACGCCTACTCGGCCCAGATCTCGGCCCTGACGGTCGCCCACGGGGAGCGCTTCGACACCGGCGTGACGGAGGTCTCGGTGACCCCCGCGGCGGAG---GGCGAGCCCGCCGACGTGGACCTCGGCGCCGCGGAGGGCTACGCCGAGCTCGACAACCGGGCCGTCACCGGCGCCGCCGGCAGCGCCAACACCCTCGTCATCGACCGCCCGGTGGGCACCAACACCATCGCGGTCACCGGCTCGCTCCCCGCGGACGCCGCACCCGTGACCGCGCTGCGGACGGTCGACGAGCCCGCCGCGCTCGCGGGCCACCTCTTCGAGGAGGCGCTGGAGAGCAACGGCGTCACGGTGAAGGGCGACGTCGGCCTGGGCGGTGTCCCCGCCGACTGGCAGgacGCCGAGGTGCTCGCCGACCACACGTCGGCCGAGCTCTCCGAGATCCTCGTGCCCTTCATGAAGTTCAGCAACAACGGGCACGCCGAGATGCTGGTCAAGAGCATCGGCCAGGAGACCGCC...GGCGCGGGCACCTGGGACGCCGGGCTCGTCGGCGTGGAGGAAGCGCTGTCCGGC---CTGGGCGTGGACACCGCCGGCCTGGTCCTCAACGACGGCTCCGGCCTGTCGCGGGGCAACCTGGTCACCGCGGACACCGTCGTCGACCTGCTCGGGCAGGCGGGT------TCCGCCCCCTGGGCGCAGACCTGGTCCGCCTCGCTGCCGGTCGCGGGCGAGAGCGACCCGTTCGTCGGC---------GGCACCCTCGCCAACCGGATGCGCGGTACCGCCGCCGAGGGCGTGGTCGAGGCCAAGACCGGGACGATGAGCGGGGTCAGCGCCCTCTCCGGGTACGTGCCCGGGCCGGAGGGC---GAGCTGGCGTTCAGCATCGTGAACAAC
PBP4_HAEIN/67-449 TCTGCAAGCACACAAAAAGTTTTTACAGCCGTTGCCGCTAAACTTGCATTAGACGATCAATTCCAATTTGAGACCGCACTTTTGAGTAATGGGAAAATTCAAAATGGGAATTTAGATGGCAACTTAATCGTGCGTTTCACAGGCGATCCTGATCTCACAAGAGGTCAGCTTTATAGCTTACTTGCCGAATTAAAAAAACAAGGCATCAAAAAAATTAATGGCGATTTAGTATTAGATACCTCTGTTTTTTCTAGTCACGACCGAGGATTAGGTTGGATTTGGAACGATCTCACAATGTGTTTCAACTCTCCACCAGCAGCTGCAAATATTGATAACAACTGTTTTTATGCGGAACTAGATGCG------------AATAAAAATCCAGGTGAAATAGTAAAAATTAATGTGCCTGCACAATTTCCTATTCAAGTGTTCGGA------CAAGTTTATGTAGCGGATAGCAATGAAGCGCCTTATTGTCAGCTCGATGTTGTTGTACACGACAATAATCGCTATCAAGTAAAAGGATGTTTAGCCCGTCAATATAAACCTTTTGGCTTAAGTTTTGCCGTGCAAAATACGGATGCTTATGCTGCTGAGATTATTCAACGTCAATTAAGACAATTAGGTATTGAGTTCAATGGCAAAGTCTTGTTACCCCAAAAACCACAACAA------...GGTCAGCTATTAGCGAAACATTTATCAAAACCATTACCAGATTTATTGAAAAAAATGATGAAAAAATCCGATAACCAAATTGCCGATTCATTATTCCGAGCGGTGGCATTCAATTACTATaaaCGCCCCGCCTCCTTTCAATTAGGCACATTAGCGGTTAAATCCATATTGCAAAAA---CAAGGAATTCGTTTTGGTAATAGCATTTTAGCCGATGGTTCGGGTCTATCTCGCCATAATCTTGTGGCACCTAAAACGATGCTATCCGTTTTAGAATACATCGCC------AAAAACGAAGATAAACTACATTTAATGGAAACTTTCCCCATCGCAGGTGTAGATGGCACGATCAGTGGG------------------CGAGGTGGATTAATTAGCCCGCCATTAGTGAAAAACGTGATTGCTAAAACTGGTTCTTTGAAAGGCGTTTATAACCTAGCTGGCTTTATGACAAATGCGCGAGGGGAAAAAGTGGCATTTGTACAATTTATTAAT
PBP4_ECOLI/60-446 CCTGCCAGTACCCAGAAAGTGATTACTGCGCTGGCGGCGTTGATTCAACTCGGCCCCGATTTTCGTTTTACCACGACGCTTGAAACCAAAGGCAATGTGGAAAACGGCGTACTTAAGGGTGACTTAGTGGCGCGATTTGGTGCCGATCCGACGTTAAAACGTCAGGATATTCGCAATATGGTCGCGACTTTGAAAAAATCTGGCGTCAACCAAATCGATGGCAATGTGTTGATAGATACCTCCATTTTCGCCAGCCACGATAAAGCCCCCGGCTGGCCATGGAATGACATGACACAATGCTTTAGCGCTCCGCCTGCCGCCGCCATAGTTGACCGCAACTGTTTCTCCGTCTCGCTCTACAGT------------GCCCCAAAGCCTGGTGATATGGCTTTTATACGCGTGGCATCTTATTACCCCGTTACGATGTTCAGCCAGGTACGCACCCTCCCCCGTGGTTCTGCCGAAGCGCAATACTGCGAACTGGATGTGGTGCCAGGCGACCTGAACCGCTTTACGCTGACGGGATGCCTGCCACAACGTTCTGAGCCGCTCCCGTTGGCTTTTGCCGTGCAGGATGGAGCCAGCTATGCCGGTGCAATTCTGAAAGATGAGTTAAAACAGGCGGGTATCACCTGGAGCGGAACACTGCTGCGCCAGACTCAGGTTAACGAACCT---...GGAACGGTAGTTGCCAGTAAACAGTCGGCCCCGCTGCACGATCTGCTTAAGATTATGCTGAAAAAGTCGGACAACATGATCGCCGATACGGTTTTCCGCATGATAGGCCATGCGCGCTTCaatGTGCCTGGAACATGGCGGGCCGGGTCGGACGCCGTGCGTCAGATCCTGCGCCAGCAAGCCGGTGTCGATATTGGAAACACCATTATTGCCGATGGTTCAGGGCTTTCGCGGCATAACCTGATTGCCCCCGCCACCATGATGCAGGTGCTGCAATACATTGCC------CAACACGACAATGAACTTAACTTTATCTCCATGCTGCCGCTGGCGGGCTATGACGGCTCTTTGCAGTAC------------------CGTGCAGGTCTGCATCAGGCGGGCGTGGATGGAAAAGTCTCAGCGAAAACCGGTTCGTTGCAGGGGGTATATAACCTGGCGGGATTCATTACCACAGCGAGCGGGCAACGAATGGCGTTTGTGCAATATCTTTCT