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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF02086 alignment
(27 sequences with 319 aa)


MTHB_HAEPH/11-298 YIGNKEKIAEWICEQLPVDVR------TIADVFSGGCSFSFEAKK--.-RGYQVIANDILNINYQLALALIVNNQEIlTaCDVDFIFSNPPKS-.--GFMTKN--YSDVFFFKEECREldAIRANILKLNNTYKQALAFALMRRAMIRKMPYSRFTISWEKVKQLRDEEYSYSKYGRRRAYHNqSFEFHFRENLNSYNQAVFNNG...NIHQAYNEDVFELLD.HIQADAVYLDPPYTG--TMNNYFGFYGLLDSYMSG----EIRQPFD...-NHFMDKNQAVELF.EKLIEKLKPFKYWLLSYNNVSRPNREELTAM
O30358_NEIGO/10-297 YIGNKEKIASWICDQLPSDVD------TVADVFSGGCSFAYEAKK--.-RGYRVITNDILAINYQIALALIENNHETlNdDDVAMIFSGSPHA-.--GFMSQR--YSEKFYFHDECQQldLYRKNIGKLNNQYKRALAFTLMRRAMIRKMPYSRFTIPWEKVKQLRDEEYSYAKYGRRRAYHNeSFQSHFLQNLDDYNQAVFNNG...WRHHAFNQDIFDLLP.NIQADAVYLDPPYTG--TMNNYFGFYGLLDSYITS----SIPKPFA...-NHFMDKKQAVELF.KRVINHLKPFKYWLLSYNNASYPNRDELEEM
Q56004_9BACL/4-286 YLGSKRTLVPVLGDIASAS-----GATEAVDLFTGTTRVAQEFKR--.-RGLRVLANDVATYSEVLAQCYIATN---.-.-GQEVDRHALEAA-.-LAELNALPGEPGYFTETFCEAS..--R-YFQPKNGARVDAIRNAIDDR----YADSWMRPILLTSLMLAADRVDSTTGVQMAYLKQ-.-WAARAHNDLELRLPDLIA--...GDGDVAREDAVTLAQeLPRVQLMYLDPPYNQHRYFTNYHIWETLIRWDAPESYGIACKRIDSrddATKSPYNMKRRMPGeMRRLLMTIKADLAVVSYNNESWIDPETMMST
MTC2_CHVP1/6-287 YIGSKLKLKDWIFEEISKRT--DDTYTKFADLFAGSCIMTHEALE--.-KKYECISNDLETYSYVIMNGLKCP----.-.-FSDKLQNIIETL-.--DDLDTKDMVIPGFVTLTYSPR..GNRMYFTEDIAMRIDIIRENIERMKERVSTDE--YNFLLASLLTSADSVKNTSVVYGAYLKK-.-FKKTALKRMVFAPLHTRSTT...VTLETFNEDATELE-.-IKTDIAYVDPPYNSRQYGANYFVLNQILTPKEIG-NGVTGLPEYK...KSSFCRKQEVAMSF.HKMLKNVS-ARLFVISYSSESLLSKGDMVAL
MTN3_NEILA/3-291 YIGSKLKLSNWLETEISNVAGHSLSDKVFCDLFAGTGIVGRKFKT--.-NVKQVIANDMEYYSYVLNRNYIG-----.-.-NCQSILKAGELL-.--QRLEQLP-PREGLIYQHYCLGsgSERQYFSDENGKKIDAVRIQIEEWKNTRYIDEDTYYFLLATLLEGADKVANTASVYGAFLKN-.-LKKSALKPLSLEPALFEIGS...DGHQVYQADANQLIK.NISGDILYLDPPYNARQYGANYHLLNSIALYDDFTPKGKTGLREYS...RSKYCSKSDVVPVF.EALIRDAD-FQYIFLSYNNEGLMSVGQVREI
O30889_HELPY/3-290 YIGSKYKLIPFIKENIHAVVGHDLSGAIFCDLFAGTGIVGRAFKK--.-AVNKVISNDLEYYSFVLNQNYIG-----.-.-NIQEIPNQEELI-.--DRLNSVA-LRKGFIHSHYSLGg.SSRQYFSETNAQKIDAVRLKIEELKLSQNIDNCAYYFLLASLLESADKVANTASVYGAFLKR-.-LKKSAQKELILKGAHFDLSL...NANEVYQQDASELIG.KISGDILYLDPPYNARQYGANYHLLNTIAAYTPFTPKGKTGLPSYQ...KSSFCSRSQILNAF.ENLIKKAR-FKYIFLSYNNEGLMSEIEIKNI
MTF1_FLAOK/3-300 FIGSKVNLLDNIQEVIEENVK--DDAHVFMDLFSGTGIVG-ENFK--.-KDYQVLSNDSLYFSYILLKAKIENNSIPnFsELKKIGIKEPLHY-.--LENEEFEISHEFFLTHNYSPYmgCERMYFTVENASRIDFIRLTLNRWKNESLINELEFAYLLAILIEAVPFISNISGTYGAYLKH-.-WDKRALGKLKLRTLDIGNNH...YANKTYNEDANSLIE.KVYGDILYIDPPYNGRQYISNYHLLETIALYDYPEIYGKTGLRPYVe.sKSLYCQKKEVGNAF.NHLIEKAN-FRHILVSYSSEGLLLEEEIESI
MTS1_STRSA/3-298 YIGSKKLLLPEIKKMVDKHTD--GSEEVFLDLFAGTNVVA-NYFK--.-QFYTVYSNDMLFFSYVNAKATIENNSKPsFsKLIQAGISSPMTY-.--LQNLEVNDETIGYYEVAYSPT..GEANYLSVHNAKKLDIIRSQIESWKNQNLLTEHEYYYLLSSLIEALPFISNTTGTYGAFLKH-.-WDKRSLNDLELQDFTIFDNS...KQNKAFNEDANELVQ.KIKADIVYIDTPYNSRQYASNYHLLENVARNEHPTLKGITKIFDWKn.lKSDYATKGKALVAM.RDLIQNIN-STHIILSYNNEGIISEEDLTNI
MTL1_LACLA/3-299 YLGNKTNLLNFIQQVIKKHD---IQGQTFADLFAGTGSVGDYFKG--.--EYTVLSNDYMYFSKVISEAKLLNSEKP.-.-KFDSFVKRYGKTPfQWLNEREYTPNDGYFVYNNYTPR..AERMYLTEENALKIDGMRLDIEELFQEGVISKAEYSYLLASLLESVTKVSNTSGTYQAFFKF-.-WESRALKKFTIMPLEMKDSLsvsKDNRCFNKNTNRLVR.EISGDIAYIDPPYTITQYTNSYHVLETIARYDNPELFGKTGRRVKR..eFSGYSNKSKAYYEF.EDLFRQIN-FTHVLVSYSNQSIVPLDELVDL
Q9ZLZ2_HELPJ/37-278 YGGGKSLAVGLIVECIPN------GVRRVISPFIGGGSVEIACAT--.ELGLEVLGFDIFDILVNFYQALLKD----.-.--KQALYDNLFS--.--LEP-----NQETYSIIK----..------QELK-----AHYKKEC------VLDPLILARDYYFNFNLSYGPGFLGWMSKIYTDK-.--QRYLNTLLKIKDFNAPS--...LKVECSSFEEVLIAY.--PNDFFYLDPSYVLENSKMFKGIYPMRNFPIHHNGFKHEVLAHML...-KRHKGPFILSYN-.-----DCELVRNAYKD---FKILEPSWQYTM
P74637_SYNY3/26-266 YPGGKSKALRQILPHVPT------QIKEYREPFIGGGSVFLAIKQIFgQHINKYWINDLNFDLYCFWKYAQEE----.-.--IERLTDAVT---.--VIKQHQTDGRELFANLT----..-------KEG----LELDEFQR------AVRFFVLNRITFSGTVESGGYSQQAFEKRFTDSS-.------IDRLKTLGTMLAN--...TTVTNGDYQQLIEQP.-GENVFIFLDPPYLS-ATKSKLYGKKGDLHTSFGHQRFAEVMENCS...-----HKWLITYD-.-----DSEEIRKLFSF---AQIIEWDLQYGM
DMA_BPT4/7-241 YTGNKQSLLPELKSHFP-------KYNRFVDLFCGGLSVSLNV----.--NGPVLANDIQEPIIEMYKRLINV----.-.-SWDDVLKVIK---.--QYKLSK-TSKEEFLKLR----..------EDYN-----KTRDPLL---------LYVLHFHGFSNMIRINDKGNFTTPFGKRTIN-.------KNSEKQYNHFKQN-C...DKIIFSSLHFKDVKI.LDGD-FVYVDPPYL-----ITVADYNK-FWSEDEEKDLLNLLDSL-...-NDRGIKFGQSNVL.EHHGKENTLLKEWSKK---YNVKHLNKKYVF
MTE5_ECOLI/12-260 SQGIKTKLVPCIKRIVPKN-----FNGVWVEPFMGTGVVAFNV----.-APKDALLCDTNPHLISFYNALKNKD---.-.-ITGDLVKDFLYR-.--EGEKLLLSNGEYYYEVR----..------ERFN-------NYKEP-------LDFLFLNRSCFNGMIRFNSKGGFNVPFCKKPNRFaQAYITKISNQVDRISEIISKG..nYTFLCQSFEKTIGMV.-NRDDVVYCDPPYIG------RHVDYFNSWGERDERLLFETLSSLN...-ATFITSTWHHNDY.----RENKYVRDLWSS---FRILTKEHFYHV
MTC1_CHVN1/7-241 WSGGKTDELKRFEDYIPS------DCSTFIEPFAGGAATFFHVGN--.-QFENKVLSDVHVELVALYR-AIAN----.-.-GKSQAIYDFMK--.--SHA----NDEKTYYEVR----..-------SWK-----PEDYVDV------ASRFYYLRKTCFRGMMRYNKNGGFNVPFGRYKTY-.---NFEDIINEEYYNILKD--...TIILEKSFDYIFETY.NDSSNFVFLDPPYD-----SVFTDYGYCSFGKEEHVRLSNFFKTT-...----KNKCLMVIG-.-----ATDFIRELYDGYIHT-EYEKKYRFKL
O41063_CHVP1/8-248 WVGGKQKFVNNIITHFPK------NIDTYHEPFLGGGSVLLAVLNSD.IQIKKIRANDLNAYLIQTYIDVKDN----.-.--TEELIEELKSL-.--K------NSEEDYYENR----..------KIFNSLKKEGHFSVKA------SALFIYLNKTCFRGLYREGPNG-FNVPFGHYKNP-.--NWINADLLRGWSDKIKN--...VEFSCLPYQDFLNDV.-GEHDFVYLDPPYAP-ENKTSFTKYNVSDFLDHEQ--LFSIVKSLP...------QFVMSNS-.-----KTEKTLNAFAS---FEILEITTRRAI
MTM3_METJA/9-270 WAGGKTQILSQIEENLPKELK-EGNIKKYIEPFVGGGAVLFYLLQKY.-EFKKVIISDINEDLMLCYK-VVKN----.-.-DVDRLIEELSSLR.DEFLSLDEEKRKEFYYKVR----..------DDFN-KNKNDCDEVKR------VAQFIFLNKTCYNGLYRVNKKGEFNVPYGRYKNP-.--KIFDEQNLKNVSKLLKN--...VKILCGDFEIVDEYV.DAES-FVYFDPPYKPLNKTSSFTSYTKYDFNDDDQIRLAKFYRKLD...--KRGAKLMLSNS-.----YNVDFFGKLYEG---FNIKKVVAKRMI
O58765_PYRHO/8-274 WAGGKRQILHYIVSLMPSDY----KDRRFHEPFFGGGAVTFWL----.-EPKEGTINDINPKLINFYI-ILRD----.-.-YPEELIEDAK---.--MHK----NEREYYYRMRREYNklALSSWFRDFVRRGFKVESEQDRRNAIRLASLLLYLNKTAYNGLYRENRKGEFNVPFGRYKNPR.---IVDEKRLREASRVLRN--...LEIYNTDFSYVLDKA.KEGD-LVYFDPPYQPISQTASFTDYSKEGFTYKDQIRLRDVCLEL-...-HRRGVYFILSNS-.-----SAPEIVKLYKDIPEFDIIIVKAKRVI
Q51829_PORGI/22-269 WVGGKRQLIPEIKNLLPKGI----LSHPYYEPFIGGGALLFEL----.-QPKNATINDYNEELINVYK-VIRD----.-.-NPHELIEDLK---.--KHK----NTAEYFYEIR----..---AIDRNPL---FINLTDIER------ASRIIYLNKTCYNGLYRVNNAGEFNSPFGKYKNPN.---IVNEPVIKAVSKYLNTAK...IQIFNGDYQTILKDI.PRSS-FVYLDPPYHPISQSANFTGYVQGGWDEKDQIRLRNVCNTL-...-NERGIKFLLSNS-.-----SSDFIKEIYSD---YNIYVVQATRAV
MTD21_STRPN/17-264 WTGGKRQLLPVIRELIPK-T----YNR-YFEPFVGGGALFFDL----.-APKDAVINDFNAELINCYQ-QIKD----.-.-NPQELIEILK---.--VHQEY--NSKEYYLDLR----..---SADRDER---IDMMSEVQR------AARILYMLRVNFNGLYRVNSKNQFNVPYGRYKNPK.---IVDEELISAISVYINNNQ...LEIKVGDFEKAIVDV.RTGD-FVYFDPPYIPLSETSAFTSYTHEGFSFADQVRLRDAFKRL-...-SDTGAYVMLSNS-.-----SSALVEELYKD---FNIHYVEATRTN
MTL21_LACLC/17-264 WTGGKRQLLPHIQYLMPE------KYNHFFEPFIGGGALFFEL----.-APQKAVINDFNSELINCYR-QMKD----.-.-NPEQLIELLTNH-.--QRE----NSKEYYLDLR----..------SSDRDGRIDKMSEVER------AARIMYMLRVDFNGLYRVNSKNQFNVPYGRYKNP-.--KIVDKELIESISEYLNNNS...IKIMSGDFEKAVKEA.QDGD-FVYFDPPYIPLSETSAFTSYTHEGFSYEDQVRLRDCFKQLD...--SKGVFVMLSNS-.-----SSPLAEELYKD---FNIHKIEATRTN
MT1A_MORBO/7-275 WAGGKNSLLDEIQKRLPDFVHS--QDFCLVEPFVGGGAVSLWALSDL.PHLKQLVINDCNADLINVYQ-VIKN----.-.-NPDDLIGYIENLQsHYDKLTDLESKKPYFYHKR----..------DVFN---QRTSNDIEQ------AGLFIFLNKSAFNGLYRVNKNNQFNVPIGNYKKP-.--TFVDKENILNISKKLQN--...TKILSGDFELVLAHLpNNFPCLFYLDPPYRPISDTASFTSYSDNGFDDNEQKRLANFCKKID...--KLGHYFLLSNSDpKNTNSSDEFFDELYQD---FKIERIQANRTI
DMA7_ECOLI/7-244 WAGNKTAIMSELKKHLP-------AGPRLVEPFAGSCAVMMAT----.-DYPSYLVADINPDLINLYKKIAAD----.-.--CEAFISRARVL-.--FEIAN---REVAYYNIR----..------QEFN--YSTEITDFMK------AVYFLYLNRHGYRGLCRYNKSGHFNIPYGNYKNP-.---YFPEKEIRKFAEKAQR--...ATFICASFDETLAML.QVGD-VVYCDPPYDG-----TFSGYHTDGFTEDDQYHLASVLEYR-...-SSEGHPVIVSNS-.-----DTSLIRSLYRN---FTHHYIKAKRSI
DMA_HAEIN/21-265 WAGGKFRLTDEINKAFPN------KKNCLIEPFVGAGAVFLNS----.-NFERYILADINPDLINLFN-IVKX----.-.-NVDGYIEDCKPI-.--FFADDA-NTPDYYYAKR----..------RQFN----ASTEPFER------SIIFLYLNRFGFNGLCRYNSKNEFNVPFGAYKTH-.---YFPEDELRYFAHKAQS--...AVFLCCDFQKTFEFA.DKDS-VIYCDPPYAPLQQETNFTGYAGNEFGLAQQRALADLAKSIQ...-KEKQISILISNH-.-----DTKFTREIYNG---AKFKRVKVQRSI
DMA_SERMA/10-252 WAGGKYPLVDEIRRHLP-------AGDCLIEPFVGAGSVFLNT----.-DYDAYILADINSDLINLYN-IVKL----.-.-RTDDFVRDAR-T-.--LFADEF-NNSDQFYLLR----..------EEFN----TSTEPYRR------ALLFLYLNRHCYNGLCRYNLRGEFNVPFGRYKKP-.---YFPEEELYWFAEKSRN--...ATFVCEHYRDTMAKA.AAGA-VVYCDPPYAPLSATANFTAYHTNSFSIADQQSLAHLAHQLS...-VESRVPVLISNH-.-----DTELTRDWYQH---AALYVVKARRTI
DMA_ECOLI/10-251 WAGGKYPLLDDIKRHLP-------KGECLVEPFVGAGSVFLNT----.-DFSRYILADINSDLISLYN-IVKM----.-.-RTDEYVQAAR-E-.--LFVPET-NCAEVYYQFR----..------EEFN----KSQDPFRR------AVLFLYLNRYGYNGLCRYNLRGEFNVPFGRYKKP-.---YFPEAELYHFAEKAQN--...AFFYCESYADSMARA.DDAS-VVYCDPPYAPLSATANFTAYHTNSFTLEQQAHLAEIAEGL-...-VERHIPVLISNH-.-----DTMLTREWYQR---AKLHVVKVRRSI
P71101_9MICO/33-261 YPGSKWSLARQIVAEFD-------DHYHYVEPFFGSGAVFFSKP---.-PVPHEILNDTNGQVVNLFR-VLRDR---.-.--TEDLVWQLEAT-.--PWS------RDEYDRSH----..------VLTG----DDVEDARR-----FVVRCWQAHASDLAKKTGWKTRGAQQRAGGMSLRW-.---QKVPAQLRELAWRLLD--...AEIENRDAVQVIRRH.NAENALIYADPPYLH--SVRTQRMYGEEMTDTEHIALLDALLAHKG...------PVVVSGY-.---------ANDLYDT-----ALEGWRKVTM
P95820_STRPH/21-271 YQGSKRALASQILSLFPHG-----GVPRLVEPFAGSAAISVAARHYG.-IAETALISDVNEPLMGLWKLIIED----.-.--PRHLIAEYTR--.--LWNEQLDDPRAYFLEAR----..------DKFN-----ATK-QPE-------ILLYLLCRCVKAAVRYSQKTGDFNQGADHRRLG-.-ANPANMAERIGRASAIMQG-...VTVSTSTYEDALVNA.-APDELVYMDPPYQGTSGVPDHRYLKGLQREPFAEVLQQAVDNKVS...---FVVSYDAVTD-.-----DNKYGYALPEELGLTHRHVVAGVSAQ