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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF02056 alignment
(8 sequences with 460 aa)


CHBF_ECOLI/5-414 KVVTIGGGSSYTPELLEGFIKRYHELPVSELWLVDVEGGKPKLDIIFDLCQRMIDNAGVPMKLYKTLDRREALKDADFVTTQLRVG----QLPARELDERIPLSHGYLG--QETNGAGGLFKGLRTIPVIFDIVKDVEELCPNAWVINFTNPAGMVTEAVYRHTGFKRFIGVCNIPIGMKMFIRDVLMLK------DSDDLSIDLFGLNHMVFIKDVLIN.GKSRFAELLDGVASGQLKASSVKN-.IFDLPFSEGLIRSLN-------LLPCSYLLYYFKQ---KEMLAIEMGEYYKG--------GARA-QVVQKVEKQLF---------------ELYKNPELKVKPKELEQRGGAYYSDAACEVINAIYNDKQAEHYVNIPHHGQIDNIPADWAVEMTCKLGRDGATPHPRITHFDDKVMG-LIHTIKGFEIAASNAALSGEFNDVLLALNLSPLV
LICH_BACSU/6-412 KIVTIGGGSSYTPELVEGFIKRYDELPVRELWLVDIPEGEEKLNIVGTLAKRMVEKAGVPIDIHLTLDRRKALKDADFVTTQFRVG----LLQARAKDERIPLKYGVIG--QETNGPGGLFKGLRTIPVILEIAKDIEELCPNAWLVNFTNPAGMVTEALLRYSNLKKVVGLCNVPIGIKMGVAKALDV-------DVDRVEVQFAGLNHMVFGLDVFLD.GVSVKEQVIEAMGD-PKNAMTMKN-.ISGAEWEPDFLKALN-------VIPCGYHRYYFKT---KEMLEHELEASQTE--------GTRA-EVVQKVEKELF---------------ELYKDPNLAIKPPQLEKRGGAYYSDAACNLISSIYNDKHDIQPVNTINNGAIASIPDDSAVEVNCVMTKTGPKP-IAVGDLPVSVRG-LVQQIKSFERVAAEAAVTGDYQTALLAMTINPLV
GLVA_BACSU/7-417 SIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDK--ERQDRIAGACDVFIREKAPDIEFAATTDPEEAFTDVDFVMAHIRVG----KYAMRALDEQIPLKYGVVG--QETCGPGGIAYGMRSIGGVLEILDYMEKYSPDAWMLNYSNPAAIVAEATRRLRPNSKILNICDMPVGIEDRMAQILGLS------SRKEMKVRYYGLNHFGWWTSIQDQeGNDLMPKLKEHVSQYGY-IPKTEAE.AVEASWNDTFAKARDVQAADPDTLPNTYLQYYLFP---DDMVKKSNPNH------------TRANEVMEGREAFIFSQ-----------CDMITREQSSENSEIKIDDH-ASYIVDLARAIA---YNTGERMLLI-VENNGAIANFDPTAMVEVPCIVGSNGPEP-ITVGTIPQFQKG-LMEQQVSVEKLTVEAWAEKSFQKLWQALILSKTV
MALH_FUSMR/5-416 SILIAGGGSTFTPGIILMLLDNLDKFPIRQIKMFDNDA--ERQAKIGEACAILLKEKAPQIKFSYSTNPEEAFTDIDFVMAHIRVG----KYPMRELDEKIPLRHGVVG--QETCGPGGIAYGMRSIGGVIGLIDYMEKYSPNAWMLNYSNPAAIVAEATRRLRPNSKVLNICDMPIGIEVRMAEILGLE------SRKDMDIMYYGLNHFGWWKSVRDKqGNDLMPKLREHVSQYGYVVPKGDNQ.HTEASWNDTFAKAKDVLALDPTTLPNTYLKYYLFP---DYVVEHSNKEY------------TRANEVMDGREKFVFGE-----------CEKVVKNQSSEGCALHIDEH-ASYIVDLARAIA---FNTKEKMLLI-VENNGAIVNFDSTAMVEIPCIVGSNGPEP-LVVGRIPQFQKG-MMEQQVTVEKLTVEAWIEGSYQKLWQAITMSKTV
AGAL_BACSU/3-404 KITFIGAGSTIFAKNVLGDCLLTEALNGFEFALYDIDP--KRLQESQLMLENLRDRYNPSVAINSYDDRKLALQNAGYVINAIQVGG---YKPSTVIDFEIPKRYGLRQTIADTVGIGGIFRSLRTIPVLFDIAKDMEEMCPDAWFLNYTNPMATLTGAML-RYTNIKTIGLCHSVQVCTKDLFKALGM-------EHDGIEERIAGINHMAWLLEVKK-.-DG--TDLYPEIKRRAKEKQK----.----TKHHDMVRFELMDKFG-YYVTESSEHNAEYH---PYFIKRNYPEL-----------ISELQIPLDEYPRRCVKQ-----------IENWEKMRDDIVNNKNLTHERSKEYGSRIIEAM---ETNEPFTFGGNVLNTGLITNLPSKAVVEVTCVADRKKITP-CFAGELPEQLAA-LNRTNINTQLMTIEAAVTRKKEAVYQAAMLDPHT
AGAL_ECOLI/6-421 KITFIGAGSTIFVKNILGDVFHREALKTAHIALMDIDP--TRLEESHIVVRKLMDSAGASGKITCHTQQKEALEDADFVVVAFQIGG---YEPCTVTDFEVCKRHGLEQTIADTLGPGGIMRALRTIPHLWQICEDMTEVCPDATMLNYVNPMAMNTWAMYARYPHIKQVGLCHSVQGTAEELARDLNI-------DPATLRYRCAGINHMAFYLELERKtADGSYVNLYPELLAAYEAGQAPKPN.IHGNTRCQNIVRYEMFKKLG-YFVTESSEHFAEYT---PWFIKPGREDL-----------IERYKVPLDEYPKRCVEQ-----------LANWHKELEEYKKASRIDIKPSREYASTIMNAI---WTGEPSVIYGNVRNDGLIDNLPQGCCVEVACLVDANGIQP-TKVGTLPSHLAA-LMQTNINVQTLLTEAILTENRDRVYHAAMMDPHT
LPLD_BACSU/11-425 KIAYIGGGSQGWARSLMSDLSIDERMSG-TVALYDLDF-----EAAQKNEVIGNHSGNGRWRYEAVSTLKKALSAADIVIISILPG----SLDDMEVDVHLPERCGIYQSVGDTVGPGGIIRGLRAVPIFAEIARAIRDYAPESWVINYTNPMSVCTRVLYKVFPGIKAIGCCHEVFGTQKLLAEMVTERLGIEVPRREDIRVNVLGINHFTWITKASYR.HIDLLPIFREFSAHYGESGYELEG-.---ECWRDSVFCSAHRVAFD--LFETYGAIPAAGD---RHLAEFLPGPYLKQ--------PEVWKFHLTPISFRKQDR-----------AEKRQETERLIVQQRGVAEKASGEEGVNIIAAL---LGLGELVTNVNMPNQGQVLNLPIQAIVETNAFITRNRVQP-ILSGALPKGVEM-LAARHISNQEAVADAGLTKDTGLAFQAFLNDPLV
AGLA_THEMA/5-451 KIGIIGAGSAVFSLRLVSDLCKTPGLSGSTVTLMDIDE--ERLDAILTIAKKYVEEVGADLKFEKTMNLDDVIIDADFVINTAMVGGHTYLEKVRQIGEKYGYYRGIDAQEFNMVSDYYTFSNYNQLKYFVDIARKIEKLSPKAWYLQAANPIFEGTTLVTRTVP-IKAVGFCHGHYGVMEIVEKLGLE-------E-EKVDWQVAGVNHGIWLNRFRYN.GGNAYPLLDKWIEEKSKDWKPENPFnDQLSPAAIDMYRFYGVMPIGDTVRNSSWRYHRDLETKKKWYGEPWGGADSEIGWKWYQDTLGKVTEITKKVAKFIKENPSVRLSDLGSVLGKDLSEKQFVLEVEKILDP-ERKSGEQHIPFIDALLNDNKARFVVNIPNKGIIHGIDDDVVVEVPALVDKNGIHPEKIEPPLPDRVVKYYLRPRIMRMEMALEAFLTGDIRIIKELLYRDPRT