PANDIT Home | Browse PANDIT | Help on PANDIT | Release notes | Pfam
 pan•dit |
PANDIT Protein and Associated NucleotideDomains with Inferred Trees |
| (View raw data for PF02018 - CBM_4_9) |
| Carbohydrate binding domain |
| (Pfam reference: accession no. PF02018) |
| (Interpro reference: accession no. IPR003305) |
| sequences | alignment | phylogeny |
| amino acids (Pfam-A seed alignment) |
47 sequences @ 220 aa (ave. pairwise identity: 0.19) (view Jalview alignment from Pfam) |
New Hampshire format (total tree length: 41.72) |
| nucleotides (available for above) |
47 sequences @ 660 bp (ave. pairwise identity: 0.36) |
New Hampshire format (total tree length: 26.15) |
|
amino acids, restricted set (corresp. to available nt seqs) |
47 sequences @ 220 aa (ave. pairwise identity: 0.19) |
New Hampshire format (total tree length: 41.72) |