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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF01938 phylogeny
for restricted amino acid alignment


 
((((((((((((((TRM2_YEAST/163-228,YAD7_SCHPO/107-167),((O07346_9SYNC/12-70,(YFJO_BACSU/11-69,RR2A_CHLRE/28-87)),(RR2A_CHLRE/104-169,((((O54562_HALN1/80-139,(O29961_ARCFU/13-71,O27331_METTH/15-73)),Y660_METJA/20-77),YEFA_BACSU/6-64),(((Y1094_THEMA/1-55,Y257_AQUAE/1-57),Y5901_STRCO/23-84),(RUMA_HAEIN/10-68,RUMA_ECOLI/9-67)))))),Y1620_METJA/435-499),Y1729_PYRAB/366-425),Y826_METTH/368-424),Y867_METJA/373-427),Y1247_ARCFU/343-401),Q9YBR9_AERPE/391-453),Y808_RICPR/383-445),(CK5P1_ARATH/538-618,CK5P1_DROME/494-569)),(Q9WZC1_THEMA/370-431,Y754_TREPA/387-452)),(YMCB_BACSU/440-503,(Y284_AQUAE/377-437,Y996_SYNY3/383-447))),Y3980_PSEAE/378-442),Y019_HAEIN/378-441,YLEA_ECOLI/378-441);
((((((((((((((TRM2_YEAST/163-228:0.80179,YAD7_SCHPO/107-167:0.69015):0.40822,((O07346_9SYNC/12-70:0.52471,(YFJO_BACSU/11-69:0.77305,RR2A_CHLRE/28-87:0.97498):0.02461):0.08174,(RR2A_CHLRE/104-169:1.24446,((((O54562_HALN1/80-139:0.57718,(O29961_ARCFU/13-71:0.41820,O27331_METTH/15-73:0.13219):0.14379):0.03216,Y660_METJA/20-77:0.29415):0.17950,YEFA_BACSU/6-64:0.53450):0.28166,(((Y1094_THEMA/1-55:0.77856,Y257_AQUAE/1-57:0.64005):0.19726,Y5901_STRCO/23-84:1.12471):0.16107,(RUMA_HAEIN/10-68:0.47409,RUMA_ECOLI/9-67:0.36787):0.41148):0.13651):0.01644):0.11971):0.23384):0.59672,Y1620_METJA/435-499:0.78939):0.44805,Y1729_PYRAB/366-425:0.70318):0.00000,Y826_METTH/368-424:0.78075):0.09986,Y867_METJA/373-427:0.49358):0.12060,Y1247_ARCFU/343-401:0.66196):0.09932,Q9YBR9_AERPE/391-453:1.22541):0.19462,Y808_RICPR/383-445:0.95125):0.09553,(CK5P1_ARATH/538-618:0.46158,CK5P1_DROME/494-569:0.90674):0.31320):0.11801,(Q9WZC1_THEMA/370-431:0.96395,Y754_TREPA/387-452:0.81019):0.17315):0.04168,(YMCB_BACSU/440-503:0.57692,(Y284_AQUAE/377-437:0.34379,Y996_SYNY3/383-447:0.55612):0.05112):0.30710):0.14314,Y3980_PSEAE/378-442:0.40035):0.24409,Y019_HAEIN/378-441:0.09291,YLEA_ECOLI/378-441:0.14592);