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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF01938 phylogeny
for amino acid alignment


 
(((((((((RR2A_CHLRE/104-169,((((O54562_HALN1/80-139,(O29961_ARCFU/13-71,O27331_METTH/15-73)),Y660_METJA/20-77),YEFA_BACSU/6-64),(((Y1094_THEMA/1-55,Y257_AQUAE/1-57),Y5901_STRCO/23-84),(RUMA_HAEIN/10-68,RUMA_ECOLI/9-67)))),((O07346_9SYNC/12-70,RR2A_CHLRE/28-87),YFJO_BACSU/11-69)),(TRM2_YEAST/163-228,YAD7_SCHPO/107-167)),Y1620_METJA/435-499),(Q9WZC1_THEMA/370-431,((((Y3980_PSEAE/378-442,(Y019_HAEIN/378-441,YLEA_ECOLI/378-441)),((CK5P1_DROME/494-569,CK5P1_CAEEL/478-543),Y754_TREPA/387-452)),(Y996_SYNY3/383-447,(Y284_AQUAE/377-437,YMCB_BACSU/440-503))),(CK5P1_ARATH/538-618,Y808_RICPR/383-445)))),(Q9YBR9_AERPE/391-453,Y1247_ARCFU/343-401)),Y867_METJA/373-427),Y826_METTH/368-424),Y1875_PYRHO/366-425,Y1729_PYRAB/366-425);
(((((((((RR2A_CHLRE/104-169:1.22970,((((O54562_HALN1/80-139:0.58238,(O29961_ARCFU/13-71:0.42048,O27331_METTH/15-73:0.13077):0.14897):0.02314,Y660_METJA/20-77:0.29363):0.17322,YEFA_BACSU/6-64:0.55216):0.28578,(((Y1094_THEMA/1-55:0.76756,Y257_AQUAE/1-57:0.64112):0.18109,Y5901_STRCO/23-84:1.14574):0.15996,(RUMA_HAEIN/10-68:0.48323,RUMA_ECOLI/9-67:0.36016):0.42525):0.12343):0.02965):0.12338,((O07346_9SYNC/12-70:0.49961,RR2A_CHLRE/28-87:1.02578):0.03833,YFJO_BACSU/11-69:0.76026):0.07635):0.21694,(TRM2_YEAST/163-228:0.77071,YAD7_SCHPO/107-167:0.73863):0.42201):0.49799,Y1620_METJA/435-499:0.96524):0.34521,(Q9WZC1_THEMA/370-431:1.04616,((((Y3980_PSEAE/378-442:0.38974,(Y019_HAEIN/378-441:0.09645,YLEA_ECOLI/378-441:0.14327):0.26318):0.06753,((CK5P1_DROME/494-569:0.86249,CK5P1_CAEEL/478-543:0.67620):0.26673,Y754_TREPA/387-452:0.83054):0.25440):0.09869,(Y996_SYNY3/383-447:0.53932,(Y284_AQUAE/377-437:0.30970,YMCB_BACSU/440-503:0.60976):0.07690):0.29127):0.12062,(CK5P1_ARATH/538-618:0.63118,Y808_RICPR/383-445:0.82810):0.13894):0.11426):0.21249):0.15709,(Q9YBR9_AERPE/391-453:1.28913,Y1247_ARCFU/343-401:0.54070):0.08932):0.11377,Y867_METJA/373-427:0.49201):0.03700,Y826_METTH/368-424:0.80441):0.63319,Y1875_PYRHO/366-425:0.09370,Y1729_PYRAB/366-425:0.17758);